Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00612 ATGAGGACTGGAAACCATAAGAGGAAGCTGAGGCTAAGTAAGATCTATTCATTTGCTTGTGGAAGAACATCATTGAAAGATGAAGACCATTCACAAATTGGGACGCCCGGGTTTTCAAGAGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGTCTGGAATGCGTAATTATGTTGACAATTCCATCAGGTCTACAAAGTATACACCCATCAATTTTTTGCCCAAGTCCTTGTTTGAGCAGTTCAGGAGGGTGGCTAACTTTTACTTCTTGGTTGCCGGAATACTAGCCTTCACTCCTCTTGCTCCTTTTACTGCCGTTAGTGCAATTATCCCTCTTATTGCAGTCATTATCGCAACAATGATTAAAGAAGGTATTGAAGATTGGCGACGACAGTCACAGGATATTGAGGTGAATAACAGAAAGGTTAAGGTTCATCAAGGCAATGGAGTCTTTGATTCTACTGAATGGAAAACTTTGAGGGTCGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCTGCCGATCTTCTTTTGATTTCATCATGCTATGAGGATGGAATCTGTTACGTAGAAACAATGAACCTTGATGGGGAAACAAATCTGAAGGTAAAGCAAGCATTGGATGCAACTGCATTTGCAAATGAGGATTCTAACTTCCGTGATTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGAAGCATGGACTTTGAAGAGCAACAATATCCACTTTCCCCACAAAATCTTCTCTTGAGAGACTCCAAACTTCGAAACACAGAATATATATATGGGGTTGTTGTCTTTACTGGTCAAGATTCAAAGGTTATTCAAAATTCTACTGATCCGCCTTCCAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTACTGTTTGGCATTCTATTCGTTCTGGCATTTATTGGATCTATAGTCTTTGGTGTCGTGACTAAAGATGATCTGAAAAATGGAAGGAGTAAGAGATGGTATCTTAAACCCGAAGATTCTACTATTTTCTTTGATCCTGAGAATGCACCAGCTGCTGCAATTTTTCACTTTCTTACTGCACTGATGTTGTATAACTACTTTATCCCTATATCATTGTATGTGTCTATTGAGATTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATACACATGTACTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACTGGCACTTTGACCTGCAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACAGCTTATGGCAGTGGTATCACTGAAACTGAGAGAGCCATGGAAGCCAGAAATGGTATGCCAATGCTTAATGGTAATGGCAATGGAAATATCTATAAGCACAATGAGGATGCTACAGATACAAATCCCTCTGTCAAAGGGTTCAATTTTAAGGACAAAAGGATTATGAATGGAAAATGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCCGATGTGGATGAAAACACGGGAAAGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTTGAATTCTTTCAGAGGACACAGACAAGTATTTCAATTCGTGAATTGGATCCTAGGTCTGGAAGGAAGGTCGAAAGGTCATATAAGCTTTTAAATGTTTTGGAGTTTAATAGCGCACGAAAGAGGATGTCTGTCATAATTAGAGACGAAGAAGGGAAAATACTATTACTATGCAAAGGTGCTGACAGTGTAATGTTTGAGAGGCTTGCGAAGAATGCTAGCAAATTTGAAGAGAAAACAAAGGAGCATATCAATGAATATGCTGATGCAGGCCTACGGACCTTGGTACTTGCTTATCGTGAACTTGATGAGGTGGAATACAAGGAATTTGACAGGAAATTCTATGAAGCAAAGAATTCAGTTAGTGCAGAGAGGGAGTCAATGATTGATAAAGTAACAGATCGCATTGAAAGGAATTTAATTCTTCTTGGTTCTACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGATCAATATTGGTTTTGCCTGTAGTTTGCTCAGACAAGGAATGAAACAGATTATTATAACTCTGGATACACCAGAAATTCAAGCCTTAGAAAGGACGGGGGAGAAGGATATGATCACTAAGGCATCAAAAGATAGTATCGTCCACAAGATAACTCGGGCAAGATCTCAGCTCACTGCATCAAGTGGAAGCTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACTTATGCTCTAGAAGATGATGTGAAGAATGTATTCCTTGACCTTGCAATTGGATGTGCGTCCGTTATTTGTTGTCGCTCATCTCCAAAGCAAAAGGCAATGGTCACTAAGTTGGTTAAACTTGCCACGGGGAAAACAACATTAGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGAGTTGGAATCAGTGGCGCCGAAGGGATGCAGGCGGTCATGTCGAGTGATATTGCAATTGCTCAGTTCAGATATTTGGAGCGTCTTTTACTTGTGCATGGACATTGGTGTTACAGGAGATTATCATCAATGATATGCTACTTTTTCTACAAGAATTTCACGTTCGGTTTTACACTTTTCTTATATGAGGCATACACTTCGTTCTCTGGACAACCTGCATATAACGACTGGTTTATGTCACTCTACAACGTCCTGTTCTCATCTCTGCCAGTTGTGGCCCTCGGGGTGTTTGACCAAGACGTTTCTGCAAGATACTGCCTCAAG 2970 40.3 MRTGNHKRKLRLSKIYSFACGRTSLKDEDHSQIGTPGFSRVVFCNDPDCLESGMRNYVDNSIRSTKYTPINFLPKSLFEQFRRVANFYFLVAGILAFTPLAPFTAVSAIIPLIAVIIATMIKEGIEDWRRQSQDIEVNNRKVKVHQGNGVFDSTEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDATAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGVVVFTGQDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFGILFVLAFIGSIVFGVVTKDDLKNGRSKRWYLKPEDSTIFFDPENAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGITETERAMEARNGMPMLNGNGNGNIYKHNEDATDTNPSVKGFNFKDKRIMNGKWVNEPHADVIQKFFRLLATCHTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFFQRTQTSISIRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIIRDEEGKILLLCKGADSVMFERLAKNASKFEEKTKEHINEYADAGLRTLVLAYRELDEVEYKEFDRKFYEAKNSVSAERESMIDKVTDRIERNLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLDTPEIQALERTGEKDMITKASKDSIVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDDVKNVFLDLAIGCASVICCRSSPKQKAMVTKLVKLATGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTLFLYEAYTSFSGQPAYNDWFMSLYNVLFSSLPVVALGVFDQDVSARYCLK 990
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7423633 7430777 + Chy5G096580.1 Chy05g00612 226839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00612 990 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Chy05g00612 990 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Chy05g00612 990 PRINTS P-type cation-transporting ATPase superfamily signature 753 763 - -
Chy05g00612 990 SUPERFAMILY HAD-like 421 922 IPR036412 -
Chy05g00612 990 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 990 - -
Chy05g00612 990 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Chy05g00612 990 Gene3D - 699 907 IPR023214 -
Chy05g00612 990 CDD P-type_ATPase_APLT_Dnf-like 59 990 - -
Chy05g00612 990 Gene3D - 115 289 - -
Chy05g00612 990 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 986 IPR023298 -
Chy05g00612 990 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Chy05g00612 990 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 990 - -
Chy05g00612 990 SFLD Haloacid Dehalogenase 408 918 - -
Chy05g00612 990 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 833 949 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy05g00612 990 Pfam E1-E2 ATPase 138 380 - -
Chy05g00612 990 Gene3D - 549 681 IPR023299 GO:0000166
Chy05g00612 990 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Chy05g00612 990 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 989 IPR032630 -
Chy05g00612 990 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 666 IPR023299 GO:0000166
Chy05g00612 990 SFLD p-type atpase 408 918 IPR044492 -
Chy05g00612 990 Pfam Cation transport ATPase (P-type) 535 629 - -
Chy05g00612 990 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 989 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02193 Chy-Chr1:26475731 Chy05g00612 Chy-Chr5:7423633 0 dispersed
Chy01g02194 Chy-Chr1:26476166 Chy05g00612 Chy-Chr5:7423633 0 dispersed
Chy05g00612 Chy-Chr5:7423633 Chy10g00952 Chy-Chr10:15072143 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00612 K01530 - csv:101205800 1947.55