Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00670 ATGGAGCATGGAGGTGTTGTGTCGAAGGGGATGGTGTCAGACCCTTCAAGTTCGTACCAAAAAATAATAATAGTTGCAGCTATTGCAGCCGGAGTCCAATTTGGTTGGGCTCTACAGCTTTCATTGCTAACACCTTACGTACAACAACTTGGAGTTTCACATACATGGTCAGCTTTCATATGGCTTTGCGGACCATTATCAGGGCTTATTGTGCAACCCACAGTCGGGTACTACAGTGATCGCTGCACCTCTAGGTTTGGTCGTCGTCGGCCGTTCATTGTTGCTGGAGCTAGTTTTGTGGCAATTGCAGTTTTCCTCATTGGCTTTGCTGCAGACATTGGGCATGCAGTGGGTGATCCGCTTAACAAACCAACAAAACCAAGAGCTGTTGCCATCTTTGTGGTTGGATTTTGGGTTCTTGATGTTGCTAACAACATGCTTCAAGGCCCTTGTAGAGCTCTGTTGGCAGATATGTCATGTAACAACCACAAGAAGATGAGAATGGCGAATGGATTTTTCTCATTCTTCATGGGGGTAGGGAATGTTTTGGGGTACGCAGCTGGGTCCTATAACAAACTCTACAAATTCCTTCCCTTCACACTAACCGAAGCATGTGACAGTTACTGTGCCAACCTCAAAACATGCTTCTTGATCGACATTGTATTCCTTCTCCTCATTACCACGTTCGCTGTGTTGACGGTGAGCGAGAAACAATTTGACCCACTGGAGATTGACGAAGAAGCAACACCCTTTTTTGGGAAATTGTTTGGAGCACTCAAGAAGTTGGAGAGGCCCATGTGGCTTTTGTTGCTGGTAACAGCATTGAACTGGATCGGTTGGTTCCCATTTATCATGTACGATACTGACTGGATGGGTTTGGAAGTGTACGGAGGAAAGCCAAAGGGGAGTCCTCAAGAAGTCAAGTTCTATGACCTTGGTGTTCGTGCTGGGGCCCTTGGGTTGATGATAAACTCATTTGTTTTGGGATTTTCAGCTTTGGGAATTGAGCCAATAAGCCGTATTTTAGGAGGCCTCAGATGGTGGTGGGGAATTGTTAACATTATATTTACAGTTTGCATGGGATCCACCGTCGTTGTTACAAAGGTTGCTGAGCGTTGGAGGTCCATCAATGGTTTGAATCCTCCTCCACTAAACGTCAGGGCAGGAGCATTTTCGATCTTTGCGGTATTGGGTATTCCATTGTCAGTCACTTTTAGTGTTCCATTTGCCCTTGCGTCCATCTTTTCTTCAGAATCGGATGCGGGTCAAGGCCTCTCCTTGGGAATTCTCAACCTCTTCATTGTCATTCCACAATTTATCGTATCCTCAGTTAGTGGGCCATTAGATGCTGCTTTCGGAGGAGGAAACTTACCCGCATTCGTAATGGGTGGAATTGCTTCTTTTGCAAGTGCAATGTGTGCAATGTTTGTTCTCCCCGATCCACCACCTCAATCCGAAGCCTCCTTAACAATGGCCGGTGGTCATTGA 1488 46.1 MEHGGVVSKGMVSDPSSSYQKIIIVAAIAAGVQFGWALQLSLLTPYVQQLGVSHTWSAFIWLCGPLSGLIVQPTVGYYSDRCTSRFGRRRPFIVAGASFVAIAVFLIGFAADIGHAVGDPLNKPTKPRAVAIFVVGFWVLDVANNMLQGPCRALLADMSCNNHKKMRMANGFFSFFMGVGNVLGYAAGSYNKLYKFLPFTLTEACDSYCANLKTCFLIDIVFLLLITTFAVLTVSEKQFDPLEIDEEATPFFGKLFGALKKLERPMWLLLLVTALNWIGWFPFIMYDTDWMGLEVYGGKPKGSPQEVKFYDLGVRAGALGLMINSFVLGFSALGIEPISRILGGLRWWWGIVNIIFTVCMGSTVVVTKVAERWRSINGLNPPPLNVRAGAFSIFAVLGIPLSVTFSVPFALASIFSSESDAGQGLSLGILNLFIVIPQFIVSSVSGPLDAAFGGGNLPAFVMGGIASFASAMCAMFVLPDPPPQSEASLTMAGGH* 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8534420 8536024 + Chy5G097160.1 Chy05g00670 226897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00670 495 Gene3D MFS general substrate transporter like domains 16 488 IPR036259 -
Chy05g00670 495 CDD MFS_SLC45_SUC 31 476 - -
Chy05g00670 495 PANTHER SUGAR TRANSPORTER 18 486 - -
Chy05g00670 495 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 18 486 - -
Chy05g00670 495 SUPERFAMILY MFS general substrate transporter 22 484 IPR036259 -
Chy05g00670 495 TIGRFAM GPH_sucrose: sucrose/H+ symporter 19 482 IPR005989 GO:0005887|GO:0008515|GO:0015770
Chy05g00670 495 Pfam MFS/sugar transport protein 28 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01280 Chy-Chr3:15820581 Chy05g00670 Chy-Chr5:8534420 3.26E-154 dispersed
Chy05g00670 Chy-Chr5:8534420 Chy09g00637 Chy-Chr9:8149060 8.96E-138 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00670 K15378 - csv:116401998 973.385