Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00715 ATGCAGATCGTGCATCTGGAAAAGTTAAGTGACATTCAGTGCCAACCTCAATCACAGCTAAAATTCATAAGCGAAGCATGGCTACAGATTGTTGAGTGTAGGCGAGTTCTTAAATGGACATATGCCTATGGATATTATCTACCTGAGCGTGAACATGCCAAGAGACAATTCTTTGAATACTTGCAAGGTGAGGCTGAGTCTGGGCTGGAACGACTCCACCAATGTGCAGAAAAGGAGTTGCATGCTTACCTAAATGCTGCTGATGGCCCTTCAAAAGATTTTAACGAGTTCCGTACCAAACTTGCTGGACTAACCAGTGTAACTCGAAATTACTTCGAGAATTTAGTTCGTGCACTTGAGAACGGTCTGTCGGATGTTGATTCCCTCGGTACCTGCAGCAAAACATCAAGCTCAAAGAGTACCGGTGGCTGTAGGAGTAAAGGTGGAAAAGGCAAGATGAGTGCATTCAGAGGTAGTGGTTCTAGTCGAAACATTGATGATACTGACCATTGGTCTTGTGAACATTGCACCTTTGCAAATGTTAAGTCAGCTACATTCTGCCAGATGTGCCAACAACGGCGATAG 585 44.27 MQIVHLEKLSDIQCQPQSQLKFISEAWLQIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSLGTCSKTSSSKSTGGCRSKGGKGKMSAFRGSGSSRNIDDTDHWSCEHCTFANVKSATFCQMCQQRR* 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9483028 9485966 + Chy5G097610.1 Chy05g00715 226942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00715 194 SMART zf_4 169 193 IPR001876 -
Chy05g00715 194 MobiDBLite consensus disorder prediction 132 163 - -
Chy05g00715 194 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 1 146 IPR031127 GO:0004842|GO:0016567
Chy05g00715 194 SUPERFAMILY Ran binding protein zinc finger-like 167 194 IPR036443 -
Chy05g00715 194 Gene3D - 166 194 - -
Chy05g00715 194 ProSitePatterns Zinc finger RanBP2-type signature. 171 190 IPR001876 -
Chy05g00715 194 ProSiteProfiles Zinc finger RanBP2 type profile. 167 194 IPR001876 -
Chy05g00715 194 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 1 146 - -
Chy05g00715 194 Gene3D - 2 126 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00715 K11968 - csv:101218052 380.948