Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00823 ATGTTGGAGGGTGGTCAAAAATTCCCTGGAATGATCGATTTAAACGAGCATGCATATGATCTATCGCAAGGGTTTTACCATAAACTTGGTGAGGGAACCAACATGTCTATTGACAGCTTTGCAAGCTTGCAAACAAGCAACGATGGAGGGTCAGTTGCCATGTCTTTAGATAACAGCAGTGTAGGATCGAACGAGTCTCACACTCGGATCTTAAATCACCAAGGCTTACGACGGCGTGCAAATGACAACCATACTTTTCAACATAGTGTTAACCGTCGCGGAAGAGTTACACATCACCTGAGTGATGATGCGCTAGCCCGAGCTTTATTTGATAGTAATACACCCACTCAGGGTCTTGAAAATTTTGAGAAATGGACTCTTGATTTAAGAAAGCTTAATATGGGAGAGGCTTTTGCTCAAGGTGCCTTTGGGAAACTCTACAGAGGTACTTATGATGGTGAAGATGTTGCTATCAAGATCTTGGAGAGGCCAGAGAATGACCTGGAAAAGGCTCAGTTAATGGAGCAGCAATATCAGCAGGAGGTGATGATGCTTGCTACTCTAAAGCACCCAAATATTGTCCGGTTTATTGGATCATGCCATAAGCCGATGGTTTGGTGCATTGTTACTGAGTATGCTAAGGGCGGTTCAGTTAGGCAGTTCTTGATGAGGCGACAAAGTCGTTCTGTCCCACTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGCTGATTCACAGGGACTTGAAATCAGACAACCTTTTGATTTTTGCGGACAAGTCTATCAAAGTTGCTGACTTTGGAGTGGCCCGGATTGAGGTGCAGACAGAAGGAATGACACCTGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACACAAAAGGTGGACCTGTATAGCTTTGGTATTGTTCTGTGGGAGCTCATAACTGGAATGCTTCCGTTCCAGAACATGACAGCTGTTCAGGCCGCCTTTGCAGTTGTAAACAAGGGAGTCCGTCCTATCATTCCCAATGATTGCTTGCCCGTTTTGAGTGACATCATGACCCGGTGCTGGGATCCCAATCCTGATGTTAGGCCATCATTCACCGAAGTCGTCAGAATGCTTGAGAATGCACAAACTGAGATCATGACGACGGTTCGTAAGGCTCGTTTCAGGTGTTGCATTACGCAGCCGATGACAACAGACTGA 1242 46.14 MLEGGQKFPGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNRRGRVTHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMRRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDPNPDVRPSFTEVVRMLENAQTEIMTTVRKARFRCCITQPMTTD* 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11816512 11824012 + Chy5G098690.1 Chy05g00823 227050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00823 413 SMART serkin_6 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00823 413 SUPERFAMILY Protein kinase-like (PK-like) 117 386 IPR011009 -
Chy05g00823 413 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 404 - -
Chy05g00823 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672|GO:0006468
Chy05g00823 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672|GO:0006468
Chy05g00823 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672|GO:0006468
Chy05g00823 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Chy05g00823 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
Chy05g00823 413 PANTHER SERINE-THREONINE PROTEIN KINASE 2 404 - -
Chy05g00823 413 CDD STKc_MAP3K-like 139 386 - -
Chy05g00823 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Chy05g00823 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Chy05g00823 413 ProSiteProfiles Protein kinase domain profile. 132 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00823 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672|GO:0006468
Chy05g00823 413 Gene3D Transferase(Phosphotransferase) domain 1 215 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02618 Chy-Chr2:29333915 Chy05g00823 Chy-Chr5:11816512 3.51E-76 dispersed
Chy05g00823 Chy-Chr5:11816512 Chy12g00928 Chy-Chr12:14655762 7.68E-89 dispersed
Chy06g00131 Chy-Chr6:862656 Chy05g00823 Chy-Chr5:11816512 1.77E-27 dispersed
Chy06g00556 Chy-Chr6:3814007 Chy05g00823 Chy-Chr5:11816512 2.10E-74 dispersed
Chy09g00366 Chy-Chr9:3200310 Chy05g00823 Chy-Chr5:11816512 9.58E-76 dispersed
Chy05g00823 Chy-Chr5:11816512 Chy12g01272 Chy-Chr12:17302183 3.42E-100 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71272 PF07714 PK_Tyr_Ser-Thr 6.70E-65 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00823 - - csv:101213713 839.336