Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00831 ATGCAGATTAACATGAGAGGTTTAGATGGAATCCAGGGACCTGTATATGTCGGCACGGGGTGTGTCTTTAGGAGGCAAGCTTTATATGGTTATGAACCCCCAAAAGGTCCTAAGCGCCCAAAAATGGTAAGCTGTGATTGTTGTCCATGCTTTGGACGTCGAAAGAAGCTCAAGAACTCCAAGAGTGGGGCGGATGGAGATGTTGCAGTACTGGCAGATGACAAGGAGCTACTGATGTCACAAATGAATTTCGAAAAGAAATTTGGACAGTCATCAATTTTTGTTACGTCTACTTTGATGGAAGAAGGTGGTGTTCCACCCTCCTCGAGTCCAGCAGCCCTGCTTAAGGAAGCAATTCATGTAATCAGTTGTGGTTATGAAGACAAAACCGAATGGGGTACGGAGTTGGGCTGGATTTACGGATCTATCACAGAAGATATTCTAACAGGCTTCAAAATGCATTGTCGTGGCTGGAGATCCATATACTGCATGCCAAAGAGACCTGCATTTAAGGGTACAGCTCCCATCAACTTGTCTGATCGGCTGAACCAGGTGCTTCGGTGGGCACTCGGGTCTATTGAAATCTTTTTCAGCAACCATTGCCCCGTTTGGTATGGCTACAAGGGCGGGAAGCTAAAGTGGCTTGAGAGATTTGCATATGTCAACACAACTGTCTACCCCTTCACTTCAATACCACTTCTCGCCTATTGTACCCTCCCTGCAATCTGCCTGCTCACGGATAAGTTTATCATGCCACCGATAAGCACCTTTGCAAGTCTCTTCTTCATTGCCTTGTTTCTTTCCATTTTTGCTACGGGAATTCTTGAGCTTAAATGGAGTGGAGTTAGTATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTATTTCAGCTCATCTATTTGCTGTTATACAAGGTCTGTTGAAGGTATTGGCTGGAATTGATACTAGCTTTACAGTTACATCCAAGGCAACAGACGATGAAGACTTTGGAGAATTATATGCCTTCAAATGGACAACCCTCCTAATCCCTCCAACAACTATTTTGATCATCAACCTTGTGGGAGTTGTTGCAGGAATCTCAGATGCCATAAACAATGGGTATCAATCATGGGGACCTCTCTTTGGGAAACTTTTCTTTGCCTTCTGGGTGATTGTTCATCTTTACCCATTCCTCAAGGGTCTGATGGGCCGCCAAAACCGCACACCGACAATAGTTGTCATATGGTCTGTGCTGTTGGCTTCAATCTTCTCCTTGCTTTGGGTCCGAATTGATCCATTTGTGATGAAAACAAAGGGACCTGATACCAAGAAATGTGGACTAAATTGCTGA 1341 44.67 MQINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKKLKNSKSGADGDVAVLADDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSNHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCTLPAICLLTDKFIMPPISTFASLFFIALFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGISAHLFAVIQGLLKVLAGIDTSFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKKCGLNC* 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11939933 11941774 - Chy5G098770.1 Chy05g00831 227058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00831 446 Pfam Cellulose synthase 2 440 IPR005150 GO:0016020|GO:0016760|GO:0030244
Chy05g00831 446 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Chy05g00831 446 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 2 446 - -
Chy05g00831 446 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 446 - -
Chy05g00831 446 SUPERFAMILY Nucleotide-diphospho-sugar transferases 8 270 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00831 Chy-Chr5:11939933 Chy01g01864 Chy-Chr1:24061213 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00831 K10999 - csv:101214842 897.501