Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00833 ATGGCGGCAAAAACTGAAGGCAAAGCCATTGGCATCGACCTCGGCACCACCTATAGCTGCGTCGGTGTTTGGCTCAATGATCGTGTTGAAATTATCCCCAATGATCAAGGTAACCGAACCACTCCTTCTTATGTTGCTTTCACTGATACTGAGCGTTTGATTGGCGATGCGGCCAAGAATCAAGTCGCTATGAATCCTCAGAACACTGTCTTCGATGCCAAGCGTTTGATCGGCCGACGAGTTTCCGATCCGTCTGTTCAGAGTGATATGAAGCTCTGGCCATTCAGGGTGATTGCCGGACCAGGAGACAAGCCGATGATCGTTGTCAAGTATAAAGGTGAAGATAAACAGTTCGCTCCGGAGGAGATTTCTTCTATGGTTTTGACCAAGATGAAGGAGATAGCTGAAGCGTTTCTAGGCCAAACTATCAATAACGCGGTAATTACAGTACCTGCTTATTTCAACGATTCACAAAGACAAGCGACGAAAGATGCCGGTGCAATTGGTGGTCTCAACGTGATGCGTATCATCAATGAACCAACAGCGGCGGCGATTGCGTACGGATTAGACAAAAAAGCCTCTCGTAAAGGTGAACAGAACGTGCTGATCTTCGATCTAGGCGGTGGAACTTTCGATGTGTCCCTTTTGACAATAGAAGAAGGAATTTTCGAGGTGAAAGCCACTGCCGGCGATACACATCTTGGCGGAGAAGATTTCGACAACAGACTTGTGAATCATTTTGTTACAGAATTCAAGCGAAAGAACAAAAAGGATATTAGCGGCAATGCCAGGGCATTGAGGAGGTTGAGGACGGCGTGTGAACGAGCGAAACGAGCATTGTCGTCAACGACACAAACAACGATTGAAGTCGATTCGTTGTACGAAGGGATCGATTTCTATGCAACGATAACAAGGGCTAGATTTGAAGAACTGTGTATGGATATGTTCATGAAGTGTATGGAGCCAGTGGAGAAATGTATTCGTGATGCTAAAATTGATAAAAGTCAAGTTCATGAGGTGGTTTTGGTTGGTGGATCTACAAGAATTCCCAAAGTTCAACAGCTTTTGCAAGATTACTTCAATGGAAAGGAGCTTTGCAAAAGTATCAATCCGGACGAAGCCGTTGCTTATGGAGCTGCTGTTCAGGCTGCAATTTTAAGCGGAGAAGGAGATGAGAAAGTTCAAGACCTTCTACTCCTCGACGTCACGCCTCTAAGTCTCGGCCTAGAGACGGCAGGCGGTGTAATGACAGTATTAATACCAAGGAACACAACAATCCCAACAAAGAAAGAACAAATCTTCTCAACATATTCAGACAACCAACCAGGAGTTCTAATCCAAGTATACGAAGGAGAGCGAGCAAGAACCAAAGACAACAACCTCCTCGGCAAATTCGAGCTAACTGGCATTCCTCCAGCACCAAGAGGTGTACCACAAATCAATGTGACTTTCGACATCGATGCAAATGGCATCCTAAACGTATCTGCAGAGGACAAAACCGCAGGAGTGAAGAACAAGATAACAATCACGAACGACAAGGGAAGAATGAGCAAAGAGGAAATAGAAAGGCTAGTGAAAGAGGCAGAGAAGTACAAAGCAGAGGATGAAGAAGTGAAGAAGAAGGTTGACGCTAAGAATGCATTGGAGAACTATGCATATAATATGAGAAATACTGTGAGGGATGAGAAGTTTGCTGGGAAATTGAATCCTGATGATAAGCAAAAGATTGAGAAATCTGTGGAGGAAACAATTGAATGGTTGGATAGGAATCAGTTGGCTGAGGTTGATGAGCTTGAAGACAAGCTGAAGGAGCTCGAGGGTGTTTGTAATCCCATCGTTGCTAAGATGTATCAGGGTGGTGCTCCGATGGGCGATGATATGCCCGGTAGCGGCTCCGGCCAGTCCGGCGGTGCTGGGCCGAAGATCGAGGAGGTTGATTGA 1941 45.6 MAAKTEGKAIGIDLGTTYSCVGVWLNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRVSDPSVQSDMKLWPFRVIAGPGDKPMIVVKYKGEDKQFAPEEISSMVLTKMKEIAEAFLGQTINNAVITVPAYFNDSQRQATKDAGAIGGLNVMRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFKRKNKKDISGNARALRRLRTACERAKRALSSTTQTTIEVDSLYEGIDFYATITRARFEELCMDMFMKCMEPVEKCIRDAKIDKSQVHEVVLVGGSTRIPKVQQLLQDYFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVTFDIDANGILNVSAEDKTAGVKNKITITNDKGRMSKEEIERLVKEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTVRDEKFAGKLNPDDKQKIEKSVEETIEWLDRNQLAEVDELEDKLKELEGVCNPIVAKMYQGGAPMGDDMPGSGSGQSGGAGPKIEEVD* 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11946746 11949029 - Chy5G098790.1 Chy05g00833 227060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00833 646 Coils Coil 266 286 - -
Chy05g00833 646 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Chy05g00833 646 Coils Coil 588 608 - -
Chy05g00833 646 PANTHER HEAT SHOCK PROTEIN 70KDA 1 624 IPR013126 GO:0005524|GO:0140662
Chy05g00833 646 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Chy05g00833 646 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 1 624 - -
Chy05g00833 646 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Chy05g00833 646 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Chy05g00833 646 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Chy05g00833 646 Gene3D - 192 366 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 369 389 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 477 493 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 58 66 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 396 415 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 337 353 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 209 219 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 36 48 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 146 166 - -
Chy05g00833 646 PRINTS 70kDa heat shock protein signature 8 21 - -
Chy05g00833 646 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Chy05g00833 646 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Chy05g00833 646 Coils Coil 514 541 - -
Chy05g00833 646 Gene3D - 545 646 IPR029048 -
Chy05g00833 646 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 623 IPR029048 -
Chy05g00833 646 SUPERFAMILY Actin-like ATPase domain 196 388 IPR043129 -
Chy05g00833 646 MobiDBLite consensus disorder prediction 618 646 - -
Chy05g00833 646 Gene3D - 10 384 - -
Chy05g00833 646 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Chy05g00833 646 Gene3D - 71 126 - -
Chy05g00833 646 Gene3D Actin; Chain A, domain 4 235 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01065 Chy-Chr4:15971779 Chy05g00833 Chy-Chr5:11946746 4.40E-84 dispersed
Chy05g00833 Chy-Chr5:11946746 Chy08g00766 Chy-Chr8:15354481 0 dispersed
Chy05g00833 Chy-Chr5:11946746 Chy09g00780 Chy-Chr9:10460270 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00833 K03283 - csv:101215564 1204.5