Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00834 ATGGCGAAAGGAGGAGCTCAGAAGAAAGATGTTGCAGTAGCGATCGATAAAGACAAATGCAGTCAATACGCTTTGAAATGGGCAATCGAACGGCTTCTGAGCAGAGGTCAAGTTGTCACTCTCCTTCATGTTAAACAAAAGCCGTCTTCTTCTGCAGCACATTCGATGACGAATTTGAGTGCGGATTCGGATGTGGATGAAGCGGCTTTGAATAGACAGCAGATTGAAAACCATGCGAGAGATCAGTTCTTCCTTCCATTTCGTTGCATTTGTACAAGAAACAATATACCATGCAATGAGGTGATGTTAGAGGAAGGAGAGATTCCAAAGACATTAACAAATTATGTCACCAAAAATGTTGTAGACATTTTAGTACTTGGTGCTCCTACAAGATCAATTTACAAGAGATTCAAATCAGATATCCCAAGTACTGTATCAAAAGGAGCACCAGATTTCTGTACAGTTTACACTATTGCCAGCAAAGGCAAGGTTACGGTGAAACAATCCACGGCTCCGGCTCCAGCGAAGCCCGTTGCTTCACCACGCACCCAGCTACAGCCTCCCCCGCCACGCCCTCAGCTGCTACATCAGCTCACAAACGCCTCCGAAGTTATGTCGTCGGAGACGAACCAGTCACACTCTCAATCAGCTAAATGTTTAGAGACTCAAATTAGCATAAAAAAGGTTCCTCCTCGTTCCTTCCAAGAAGATTGGGACATCAAGTCACCGTTTACAAGGCCAGGTTCAAGGGCCTCAATGAGCAAATTGATCGATCCATTCATGGCAGATTCGGACATATCCTTCGTTAGCAGCGGGAGGCGGAGCATGGATCATTGCTTCCCAGGGGCATGGAACTCCAACGCCGCCACCGGCAGTGACTCCTTTCGCCTTTCTAATGCCTCTGAGTTTGAAGTTTTCAGCCCAGGTCCAACGTCGCCAATGCTGGAAATGGGAGAAGGAACCAACAAATATGTTGATAGTAATATTAATGATCATTATAACAACACCTCTTCTTTCCATCAGGATATGTCTTTTTGCTCTTCACCAAGTGAAACCTTCTCTTGGCCTTCTAATTCTCATACTCAGGATGATGTTGAAGCTGAGATGAGAAGGTTGAAATTGGAGCTCAAACAAACTATGGACATGTATAGTACTGCCTGCAAAGAAGCCCTAACCGCCAAACAAAAGGCAATGGAGCTCCATCGCTGGAAAGTTGAAGAAGAGCAGAGGTTCGAAGCGGCGAGAATGGCGGAGGAAGCAGCATTAGCAATGGCAGAGAAGGAGAAGATAAAATGTAAAGCAGCGATGGAGGCAGCCGAAGCCGCACAAAAGAATGCAGCACTCGAGGCTAAGAGAAGAGCCAAAGTAGAGAAAATGGTGGACATGGAAGCACAACAAACGAGACGAACACTGTCATTTTCAGGATACGGTCATGCTGAAATCGGTTACAGAAAGTACGAAATCCAAGAAATCGAGACCGCCACAAAAGGCTTCTCCGAATCTTTGAAGATCGGTGAAGGCGGTTACGGTCCAGTCTTCCGTGGAGAACTCGACCACACGCCGGTGGCGATCAAGGTTCTTCGACCGGATGCCGCTCATGGACGATCTCAATTTCAACAAGAGGTTGAAGTTCTAAGTTGTATTCGACATCCAAACATGGTTCTCCTTCTCGGAGCTTGTCCTGAAAAGGGTTGTTTAGTTTACGAATTCATGGCGAATGGAAGCTTAGAAGATTGTCTCTTCCGAAAAGCGAACGATCCCATTCTTTCATGGCAATTACGATTCCGAATCGCAGCAGAGATCGCAACCGGACTTCTCTTCCTGCATCAAACCAGACCAGAACCGATCGTACACCGTGATCTGAAACCCGGTAACATTTTACTAGATAGTAACTACGTAAGCAAAATCAGCGACGTCGGACTGGCGAGGCTAGTTCCTCCTTCAGTAGCCGACTCAGTGACTCAGTATCGGATGACAGCGACGGCAGGGACATTCTTCTACATCGATCCCGAGTATCAACAAACAGGATTACTCGGGATTAAATCAGACATTTACTCACTGGGAGTGATGCTTCTGCAGATAATCACAGCAAGACCACCGATCGGACTGGCGCACGCGGTGGAAAGGGCGATTGAGAAGGGGAAATTTGAAGAGATACTAGATCCAGAGGTGAAGGATTGGCCGGTTGAAGACGCGTTGAAGTTTGCAAAGCTTTCGATTAAGTGTGCGGAGATGAGGAAGAGAGATCGGCCAGACCTTGGGAAGGTAGTGCTGCCGGAACTGAATCGATTGAGAACAATGGCGGAAGAGAGTATGGGAGTTGGGTCGTTCAGCTACAGTAGTACATGTTCATCCCCATATGCAAGCCAGACTTCTCAGGAAGTGATGAATAGTGTACAAAGACAGGTAGGAGCATGGATTGAGACCTCAAGCAGCCAATCAGATAGCAGCAGCTCATCATATTCTAGGGAAAGACCTTATTGGCTGGACTAG 2493 46.77 MAKGGAQKKDVAVAIDKDKCSQYALKWAIERLLSRGQVVTLLHVKQKPSSSAAHSMTNLSADSDVDEAALNRQQIENHARDQFFLPFRCICTRNNIPCNEVMLEEGEIPKTLTNYVTKNVVDILVLGAPTRSIYKRFKSDIPSTVSKGAPDFCTVYTIASKGKVTVKQSTAPAPAKPVASPRTQLQPPPPRPQLLHQLTNASEVMSSETNQSHSQSAKCLETQISIKKVPPRSFQEDWDIKSPFTRPGSRASMSKLIDPFMADSDISFVSSGRRSMDHCFPGAWNSNAATGSDSFRLSNASEFEVFSPGPTSPMLEMGEGTNKYVDSNINDHYNNTSSFHQDMSFCSSPSETFSWPSNSHTQDDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWKVEEEQRFEAARMAEEAALAMAEKEKIKCKAAMEAAEAAQKNAALEAKRRAKVEKMVDMEAQQTRRTLSFSGYGHAEIGYRKYEIQEIETATKGFSESLKIGEGGYGPVFRGELDHTPVAIKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPEKGCLVYEFMANGSLEDCLFRKANDPILSWQLRFRIAAEIATGLLFLHQTRPEPIVHRDLKPGNILLDSNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDIYSLGVMLLQIITARPPIGLAHAVERAIEKGKFEEILDPEVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGVGSFSYSSTCSSPYASQTSQEVMNSVQRQVGAWIETSSSQSDSSSSSYSRERPYWLD* 831
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11953629 11958762 + Chy5G098800.1 Chy05g00834 227061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00834 830 PANTHER OS02G0152300 PROTEIN 7 796 - -
Chy05g00834 830 ProSiteProfiles Protein kinase domain profile. 498 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00834 830 MobiDBLite consensus disorder prediction 807 824 - -
Chy05g00834 830 Gene3D Phosphorylase Kinase; domain 1 478 570 - -
Chy05g00834 830 MobiDBLite consensus disorder prediction 168 194 - -
Chy05g00834 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Chy05g00834 830 Pfam Protein kinase domain 500 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00834 830 SUPERFAMILY Protein kinase-like (PK-like) 476 757 IPR011009 -
Chy05g00834 830 Coils Coil 422 465 - -
Chy05g00834 830 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 137 - -
Chy05g00834 830 Pfam Universal stress protein family 10 137 IPR006016 -
Chy05g00834 830 MobiDBLite consensus disorder prediction 807 830 - -
Chy05g00834 830 Coils Coil 362 382 - -
Chy05g00834 830 Gene3D HUPs 9 159 IPR014729 -
Chy05g00834 830 Gene3D Transferase(Phosphotransferase) domain 1 571 776 - -
Chy05g00834 830 SMART serkin_6 498 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00834 830 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 7 796 - -
Chy05g00834 830 CDD STK_N 11 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01203 Chy-Chr3:15140357 Chy05g00834 Chy-Chr5:11953629 0 dispersed
Chy05g00834 Chy-Chr5:11953629 Chy05g01451 Chy-Chr5:18361498 1.52E-09 dispersed
Chy05g00834 Chy-Chr5:11953629 Chy04g00284 Chy-Chr4:2522498 3.10E-21 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71274 PF00069 Pkinase 1.40E-37 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00834 - - csv:101203771 1456.81