Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00842 ATGGCCTCCTCCTCTAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATTTTTGGCAATTGGCTCCAAGTTGGTAATGATCTCAACCATCGCCTTCTTGCTTCCTTCTGCAACAGATTTGGCTCCATATTCCTCTTGAAGCTTGGCTCCAAGAACCTTGTAGTTGTGTCTGATGCTGAGCTTGCCAGCCAAGTTCTCCATGCTCAGGGTGTCGAGTTTGGCTCTCGTCCTCGTAATGTTGTGTTTGATATCTTCACAGGAAATGGTCAGGATATGGTGTTTACGGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTTACAAATAAAGTGGTGCATAATTATAGTGGCATGTGGGAGGATGAGATGGACTTTGTGGTTCGTGACCTTAAGAGTAACAAGAAGTTTCAATCTGAAGGGATAGTCATCAGAAAGCGTTTGCAGTTGATGTTGTACAACATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCTCAGGATGATCCTTTGTTCATCGAAGCAACTCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGTTTTGAGTACAACTATGGAGATTTCATTCCTCTTCTCCGACCCTTTCTGAGAGGCTACTTGAACAAGTGTAGGGATTTGCAAACTAGGCGGTTGGAATTTTTCAACAAAAACTATGTTGAGAAAAGAAGAAAGATAATGGCTGCTAATGGAGATAAACACAAAATAACTTGTGCCATGGATCATATCATAGATGCTCAATTGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATTGTAGAGAACATCAACGTGGCAGCTATAGAAACGACACTATGGTCGATGGAATGGGCAATAGCCGAGCTAGTGAATCATCCAGAAATCCAAAACAAGATTCGTGAGGAGATTGCTAATGTCTTAAAAGGAAAGGAAGTCACTGAATCAAACCTTCACGAATTGCCATACTTACAAGCAACAGTGAAGGAAACACTTAGATTGCACACTCCAATACCGTTGTTAGTGCCACATATGAACTTGGAAGAGGCGAAACTAGGAGGATACACCATTCCAAAGGAATCCAAGGTGGTCGTTAATGCATGGTGGCTAGCTAATAACCCCGAGTGGTGGAAAAATCCAGAGGAGTTTAGGCCAGAGAGGTTCTTCGAAGAAGAAAGTGGAACAGAAGCGGTTGCTGCAGGGAAAGTGGATTATCGATTCTTACCCTTTGGAGTTGGAAGGAGGAGTTGTCCTGGAATTGTTTTGGCAATGCCAATCTTAGGACTCATCGTTGCCAAGTTGGTTTCAAAGTTTGAAATGAAGCCTCCTAATGAGGTAGATAAGATTGACGTCACCGAAAAAGGAGGACAATTCAGTCTGCATATCGCCAACCATTCAACGGTTGTTTTTAACCCCAGTAGTATTTAA 1443 42.41 MASSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASFCNRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDFVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQTRRLEFFNKNYVEKRRKIMAANGDKHKITCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQNKIREEIANVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPNEVDKIDVTEKGGQFSLHIANHSTVVFNPSSI* 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12062129 12063663 + Chy5G098880.1 Chy05g00842 227069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00842 480 Pfam Cytochrome P450 8 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 3 477 - -
Chy05g00842 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Chy05g00842 480 Gene3D Cytochrome P450 2 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PANTHER OS02G0467000 PROTEIN 3 477 - -
Chy05g00842 480 SUPERFAMILY Cytochrome P450 8 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 36 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 155 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 60 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00842 480 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00842 Chy-Chr5:12062129 Chy05g00844 Chy-Chr5:12074725 0 dispersed
Chy05g00842 Chy-Chr5:12062129 Chy05g00843 Chy-Chr5:12068419 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00842 K00487 - csv:101205537 953.355