Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00843 ATGGCCTCCTCCTCTAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATTTTTGGCAATTGGCTCCAAGTCGGTAATGATCTCAACCATCGTTTACTTGCTTCCTTGTGCAACAGATTTGGCTCCATATTTCTCTTGAAGCTTGGCTCCAAGAACCTTATAGTTGTGTCTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAGGGTGTCGAGTTTGGCTCTCGTCCTCGTAATGTAGTGTTTGATATCTTCACTGGAAATGGTCAGGATATGGTGTTTACGATTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACTCTGCCGTTTTTTACAAATAAAGTGGTGCATAATTACAGTGGCATGTGGGAGGATGAGATGGACTTTGTGGTTCGTGACCTTAAGAGTAACAAGAAGTTTCAATCAGAAGGGATAGTCATCAGAAAGCGTTTGCAGTTGATGTTGTACAACATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCTCAGGATGATCCTTTGTTCATCGAAGCAACTCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAGTACAACTATGGAGATTTTATTCCTCTACTCAGACCCTTTTTGAGAGGCTACTTGAACAAGTGTAGGGATTTGCAAAGTAGGCGGTTGGACTTTTTCAACAAAAACTATGTTGAGAAACGAAGAAAGACAATGGCTGCTAATGGAGATAAACATAAGATAACTTGTGCCATGGATCATATTATAGATGCTCAATTGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATCGTAGAGAACATCAATGTGGCAGCAATAGAAACAACACTATGGTCAATGGAATGGGCAATAGCTGAGCTAGTGAATCATCCCGAAATCCAACACAAGATTCGAGAGGAGATTGCTAATGTCCTAAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAACTGCCATACTTACAAGCAACAGTAAAAGAAACCTTGAGGTTGCACACCCCAATTCCATTGTTAGTGCCACATATGAACTTGGAAGAGGCAAAACTAGGAAGATACACCATTCCAAAGGAATCCAAGGTAGTCGTTAATGCATGGTGGCTGGCTAATAACCCCGAGTGGTGGAAAAATCCAGAGGAGTTTAGGCCAGAGAGATTCTTCGAAGAAGAAAGTGGAACAGAAGCTATTGCTGCAGGGAAAGTGGATTATCGATTCTTACCCTTTGGAGTTGGAAGGAGGAGTTGTCCTGGAATTGTTTTGGCAATGCCAATCTTAGGACTCATTGTTGCCAAGTTGGTTTCAAAGTTTGAAATGAAGCCTCCTAGTGGGATAGATAAGATCGATGTCACCGAAAAAGGAGGACAATTTAGTCTGCATATCGCCAACCATTCGACCGTTATTTTTAACCCCATTACTTCTTAA 1443 41.86 MASSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCNRFGSIFLLKLGSKNLIVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTIYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDFVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQSRRLDFFNKNYVEKRRKTMAANGDKHKITCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQHKIREEIANVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGRYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEAIAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPSGIDKIDVTEKGGQFSLHIANHSTVIFNPITS* 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12068419 12069957 + Chy5G098890.1 Chy05g00843 227070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00843 480 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS E-class P450 group I signature 36 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS E-class P450 group I signature 155 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS E-class P450 group I signature 60 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 SUPERFAMILY Cytochrome P450 8 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Chy05g00843 480 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 3 479 - -
Chy05g00843 480 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 PANTHER OS02G0467000 PROTEIN 3 479 - -
Chy05g00843 480 Gene3D Cytochrome P450 1 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00843 480 Pfam Cytochrome P450 8 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00843 Chy-Chr5:12068419 Chy05g00845 Chy-Chr5:12079228 0 dispersed
Chy05g00842 Chy-Chr5:12062129 Chy05g00843 Chy-Chr5:12068419 0 tandem
Chy05g00843 Chy-Chr5:12068419 Chy05g00844 Chy-Chr5:12074725 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00843 K00487 - csv:101205537 954.51