Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00844 ATGGCTTCCAACGCCTTGTTTTCTCTCTCTTCAATGCTTCTTGTTTCTCTTGTTTCTAAGTTCATATTCCCCATGTCTCCACTTGCTTTTGGAGCAACTATCTTCCTCGTTCCTCTCCTCACTTATATCATCTCTTCCATGGCCTCCTCCTCTAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATTTTTGGCAATTGGCTCCAAGTTGGTAATGATCTCAACCATCGCCTTCTTGCTTCCATCTGCAACAGATTTGGCTCCATATTCCTCTTGAAGCTTGGCTCCAAGAACCTTGTAGTTGTGTCTGATGCTGAGCTTGCCAGCCAAGTTCTCCATGCTCAGGGTGTCGAGTTTGGCTCTCGTCCTCGTAATGTTGTGTTTGATATCTTCACGGGAAATGGTCAGGATATGGTATTTACGGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTTACAAATAAAGTGGTGCATAATTATAGTGGCATGTGGGAGGATGAGATGGACTCCGTGGTTCGTGACCTTAAGAGTAACCAGAAGTTTCAATCTGAAGGGATAGTCATCAGAAAGCGTTTGCAGTTGATGTTGTACAACATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCTCAGGATGATCCTTTGTTTATTGAAGCAACTAAATTCAACTCGGAAAGAAGTCGATTAGCACAAAGTTTTGAGTACAACTATGGAGATTTCATTCCTCTTCTTAGACCATTCTTAAGAGGTTACTTGAACAAGTGCAGAGATTTGCAGACTAGGAGGTTGGACTTTTTCAACAAAAACTACGTGGAAAAAAGAAGGAAAATAATGGCTGCTAATGGAGATAAACACAAGATAACTTGTGCCATGGATCATATCATTGATGCTCAATTGAAGGGTGAAATAAGTGAAGAGAACGTAATTTACATCGTGGAGAACATCAACGTGGCAGCAATAGAAACGACACTATGGTCGATGGAATGGGCGATTGCCGAGCTAGTGAATCATCCAGAAATCCAACACAAGATTCGAGAGGAGATTGCTAATGTCCTAAAAGGAAAGGAAGTGAATGAATCTAACCTTCATGAACTGCCATACTTGCAAGCAACAGTAAAAGAAACATTGAGGTTGCACACCCCAATTCCATTGTTAGTGCCACATATGAACTTAGAAGAGGCAAAACTTGGAGGGTACACCATTCCAAAGGAATCCAAGGTGGTGGTAAATGCATGGTGGCTAGCTAATAACCCCAAGTGGTGGAAAAGTCCCGAGAAGTTTAGGCCAGAAAGGTTCTTCGAAGAAGAAAGTGGAATAGAGGCAGTTGCTGCAGGAAAAGTGGATTATCGATTCTTACCCTTTGGCGTTGGAAGGAGAAGTTGTCCTGGAATTGTTCTTGCAATGCCAATTTTAGGCCTCATTGTTGCCAAGTTAGTTTCAAAGTTTGAAATGAAACCTCCTAGTGGAATGGAGAAGATCGATGTCACAGAAAAAGGAGGACAATTCAGCCTACATATAGCCAACCACTCCACAGTCGTTTTTAACCCCATCATTTCTTAA 1581 42.06 MASNALFSLSSMLLVSLVSKFIFPMSPLAFGATIFLVPLLTYIISSMASSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASICNRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDSVVRDLKSNQKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATKFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQTRRLDFFNKNYVEKRRKIMAANGDKHKITCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQHKIREEIANVLKGKEVNESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPKWWKSPEKFRPERFFEEESGIEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPSGMEKIDVTEKGGQFSLHIANHSTVVFNPIIS* 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12074725 12076405 + Chy5G098900.1 Chy05g00844 227071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00844 526 Pfam Cytochrome P450 54 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 SUPERFAMILY Cytochrome P450 54 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PANTHER OS02G0467000 PROTEIN 6 524 - -
Chy05g00844 526 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 6 524 - -
Chy05g00844 526 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Chy05g00844 526 Gene3D Cytochrome P450 45 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00844 526 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00842 Chy-Chr5:12062129 Chy05g00844 Chy-Chr5:12074725 0 dispersed
Chy05g00844 Chy-Chr5:12074725 Chy11g01169 Chy-Chr11:17813436 0 dispersed
Chy05g00843 Chy-Chr5:12068419 Chy05g00844 Chy-Chr5:12074725 0 tandem
Chy05g00844 Chy-Chr5:12074725 Chy05g00845 Chy-Chr5:12079228 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00844 K00487 - csv:105434566 1012.68