Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00845 ATGGGCCATTCTGCAGCAAAGTTTGGTTTCATTTGCTCAGTCTCAGCACTAGCTTTGGGGTTGCTCACCAAGTTCATTTTCCCCAGTTTCTTCTTGTCCATCTCCCCAAACATCCTTCCAATCACTCTTTCCATTGCACTTGTTTTTGCTTTCATCTTCTTTGCCTTATCCAATTCCTCCAATAATCCTCCAGGTCCTCTCCCTGTTCCCATCTTTGGGAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTACTCGCTTCATTGTCGCAAAAATATGGCTCTGTCTTCCGACTCAAACTTGGTTACAAGAATCTAGTTGTGGTGTCAGATGCAGAGCTTGCTAACCAAGTCCTCCATGCTCAGGGTGTAGAGTTTGGATCCCGTCCACGAAATGTAGTCTTTGACATTTTCACTGGTAATGGACAAGATATGGTGTTCACCATTTATGGCGACCATTGGCGTAAAATGCGTAGAATTATGACACTGCCATTTTTCACAAATAAAGTTGTGCATAACTACAGTGGGATTTGGGAGGAAGAAATGGATTTGGTTGTTTGCGATCTCGTGAATAACCCAAAGGTGAAATCGGAAGGGTTGGTCATAAGAAAGCGTTTGCAATTGATGTTGTACAACATCATGTATAGAATGATGTTTGATACCAAGTTTGAATCTCAAGATGATCCTTTATTTATTGAGGCAACTCGATTCAACTCTGAAAGAAGTAGATTGGCACAAAGTTTTGAATACAATTATGGAGATTTCATTCCTTTGCTTAGACCCTTCTTGAGGAGTTACTTGAACAAATGCAAGGATTTGCAGAGCAGGAGGTTGGCATTTTTCAACAATAACTATGTTGAGAAAAGAAGAAGAATTATGGCTGCCAATGGAGAAAAGCACAAAATAAGCTGTGCCATGGATCATATTATAGATGCTCAGCTAAAAGGAGAAATTAGTGAAGAAAATGTGATATACATTGTGGAAAATATTAATGTTGCAGCAATAGAGACGACACTTTGGTCAATGGAATGGGCAATAGCTGAGTTGGTAAACCATCCAACTGTGCAACAAAAAATTCGAGAGGAAATCTCGACTGTCCTAAAAGGAAAGAAAGTAACTGAATCTAACTTACATGAGTTGCCATATCTGCAAGCCACAGTGAAAGAGACATTGAGACTGCACACACCAATACCTTTATTAGTACCACATATGAACTTGGAAGAAGCCAAGCTTGGAGGCTACACAATTCCAAAAGAGTCTAAGGTGGTAGTAAATGCATGGTGGTTGGCCAATAACCCAGCATGGTGGAAAAAACCAGAGGAATTCAGGCCAGAGAGGTTCCTACAAGAAGAAAGTAGCACAGAAGCTGTAGCAGGGGGCAAAGTTGACTTCCGATTTTTACCGTTCGGCGTTGGAAGAAGAAGTTGCCCTGGAATAGTTTTGGCACTGCCAATCTTAGGATTGATCATTTCTAAATTGGTGACCAATTTTGAAATGAAGCCTCCGATTGAGATGGAGAAGATTGATGTGAGCGAAAAAGGAGGACAATTCAGTTTACATATTGCCAACCACTCAACTGTGACATTCAAACCTGACTGCTTAGTCCGGTCAAAAAGTAATCCTACTGTAGAACAATGTCCTATAGGGTTGACATCCGAATAA 1665 40.96 MGHSAAKFGFICSVSALALGLLTKFIFPSFFLSISPNILPITLSIALVFAFIFFALSNSSNNPPGPLPVPIFGNWLQVGNDLNHRLLASLSQKYGSVFRLKLGYKNLVVVSDAELANQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTIYGDHWRKMRRIMTLPFFTNKVVHNYSGIWEEEMDLVVCDLVNNPKVKSEGLVIRKRLQLMLYNIMYRMMFDTKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRSYLNKCKDLQSRRLAFFNNNYVEKRRRIMAANGEKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPTVQQKIREEISTVLKGKKVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPAWWKKPEEFRPERFLQEESSTEAVAGGKVDFRFLPFGVGRRSCPGIVLALPILGLIISKLVTNFEMKPPIEMEKIDVSEKGGQFSLHIANHSTVTFKPDCLVRSKSNPTVEQCPIGLTSE* 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12079228 12081034 + Chy5G098910.1 Chy05g00845 227072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00845 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Chy05g00845 554 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 SUPERFAMILY Cytochrome P450 63 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 Pfam Cytochrome P450 63 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 Gene3D Cytochrome P450 56 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PANTHER OS02G0467000 PROTEIN 6 532 - -
Chy05g00845 554 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g00845 554 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 6 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00843 Chy-Chr5:12068419 Chy05g00845 Chy-Chr5:12079228 0 dispersed
Chy05g00845 Chy-Chr5:12079228 Chy11g01169 Chy-Chr11:17813436 0 dispersed
Chy05g00844 Chy-Chr5:12074725 Chy05g00845 Chy-Chr5:12079228 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00845 K00487 - csv:101205775 1011.91