Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00854 ATGAGTTTATTCAAGGGCCCTCCTCAGTCTCCTTACGGTAGACGGAGTGATGTCGAGGCCGGTAGCAGCAATTCCGGCGATGTCGACGACGATGATTCTTCTAATCCATTTCAAATTCGCACCACTAAACATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCCCTTGTGTTAAATGCTTCTCGACGATTTCGGTATACTTTAGACTTAAAAAAGGACGAAGAGAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCTCTTTAAAGAGGCTGGAGATCGTTTAACAGTACCAGGGCCTACAACAGCAGAAGCTCCAAATGGTGATTTTTCTGTTGGACCAGAGCAACTGGCTGTGTTGGTAAAGGATCGTAATGTTGAAGCTCTGGAGCAGCATGGAGGGGTTAAAGGCATAGCAGATATGTTGCAATCGAATTTAGAGAAGGGGATAGTTGGTGATGATTCTGATTTATTAAATCGGAGAAACAAGTATGGTTCAAACACATATCCCCAGAAACCGGGAAGGAGTTTTTGG 564 44.86 MSLFKGPPQSPYGRRSDVEAGSSNSGDVDDDDSSNPFQIRTTKHASVDRLRRWRQAALVLNASRRFRYTLDLKKDEEKKEALRKIRAHAQAIRAAYLFKEAGDRLTVPGPTTAEAPNGDFSVGPEQLAVLVKDRNVEALEQHGGVKGIADMLQSNLEKGIVGDDSDLLNRRNKYGSNTYPQKPGRSFW 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12292600 12295909 - Chy5G099000.1 Chy05g00854 227081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00854 188 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 188 IPR023298 -
Chy05g00854 188 MobiDBLite consensus disorder prediction 16 32 - -
Chy05g00854 188 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 10 188 - -
Chy05g00854 188 PANTHER - 10 188 IPR000528 GO:0006869|GO:0008289
Chy05g00854 188 MobiDBLite consensus disorder prediction 1 38 - -
Chy05g00854 188 Gene3D - 45 101 - -
Chy05g00854 188 Pfam Ca2+-ATPase N terminal autoinhibitory domain 35 77 IPR024750 GO:0005516
Chy05g00854 188 Pfam Cation transporter/ATPase, N-terminus 141 188 IPR004014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00854 Chy-Chr5:12292600 Chy07g00189 Chy-Chr7:1548092 3.74E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00854 K01537 - csv:101211703 351.288