Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00874 ATGGTGGTGAATTTCCAGTACACTGTTCTTGTGTTCTTGGCGATTGTTTTTGTTGGAAAGGCAGAAATTTACATTGTCACCATTGAAGGAGAACCGATTGTAAGTTACAAAGGTGATCTCGATGGGTTTGAAGCTACAGCAATGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGGTCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCTGTTGACATCACACATGAACAGGCAGAGACTCTAAGACGCACACCAATCGTAAAATCTGTTGAGAGGGACTGGAAGGTTAGAAAACTGACAACGCACACACCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGTGGCTTTGATAGAGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATTTATCCACATCATCCTAGTTTTGCAACGTACAATACCGAACCTTTTGGGCCGTGCATGAAGTATAAAGGGAAATGCGAAGTTGACCCCAACACTAAGAAGGATTTCTGCAATGGGAAGATCGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCTGCTGGGGCATTTAATCCAGATATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCACGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGAATATTTGGAGGATTTGTTGCTGATGTAGTTGCAGCCATTGATCAGGCTGTACATGATGGGGTTGATATTCTCAGTCTTTCAGTGGGCCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCGTATAGTCCATGGATAGCAACTGTGGCAGCTGCAATTGATGACAGAAGATACAAAAACCATCTGACACTTGGTAATGGAAAGATTTTGGCTGGACTTGGGTTATCACCTTCTACACATTTAAATCGAACATACACATTGGTCGCAGCTAATGATGTTCTGTTAGATTCTTCGATGACTAAGTACAGCCCTTCAGACTGTCAAAAGCCTGAAGTTCTAAACAAACGCTTGGTTGAAGGAAAAGTACTTCTCTGTGGTTATTCATTCAGTTTTGTTGTTGGTACTGCTTCAATCAAAAAGGTCTCTCAAACAGCAAAAGCCCTTGGGGCGGCTGGCTTTGTTCTTGCTGTTGAAAACATTTCTCCAGGAGCAAAGTTTGACCCTGTTCCTGTTGGCATTCCTGGTATTCTTATAACTGATGTCAGCAAATCAATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGACCAAATATTAGAGATTTTAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTAATTTGGGCTGCTTGGTCCCCAAATGGAACGGACGAACCAAACTATGTTGGAGAGGGATTTGCTATGATTTCTGGAACTAGCATGGCAGCGCCACATATAGCTGGCATAGCAGCTCTTGTTAAACAGAAGCATCCAAACTGGAGTCCTGCAGCCATCAAATCGGCTTTAATGACAACATCAACAACAATGGACAGAGGAGGAAGACCTCTTAAAGCACAACAATTTTCTGAAACAGAAGCCATGAAATTGGTAACTGCAACACCTTTCGATTATGGTAGTGGTCATGTAAACCCAAGAGCAGCGTTGGATCCGGGACTCATATTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACAACGGCGGGCATCAACGTTCACGAGATACACAACTATACTAACTCACCTTGCAACTTCACCATGGGGCATCCCTGGAATCTCAACAGCCCATCAATCACCATCGCCCATCTCATGGGAACTCAAATCGTTACTCGCAGAGTAACAAATGTTGCCGAAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAGTGAATCCTCCAGCAATGACTTTACGGTCTGGTTCATCAAGAAAATTTTCAGTAACTCTCACAGCCCGATCATTGACAGGAACATATAGTTTTGGCCAGGTTCTACTTAAGGGCAGTAGAGGACACAAGGTTAGAATACCTGTAGTTGCCATGGGATACCAACGATGA 2451 43.61 MVVNFQYTVLVFLAIVFVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITHEQAETLRRTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCMKYKGKCEVDPNTKKDFCNGKIVGAQHFAEAAKAAGAFNPDIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPSTHLNRTYTLVAANDVLLDSSMTKYSPSDCQKPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRGGRPLKAQQFSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLMGTQIVTRRVTNVAEEETYTITARMDPAVAIEVNPPAMTLRSGSSRKFSVTLTARSLTGTYSFGQVLLKGSRGHKVRIPVVAMGYQR* 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12920391 12926483 + Chy5G099200.1 Chy05g00874 227101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00874 816 Gene3D Peptidase S8/S53 domain 155 686 IPR036852 GO:0004252|GO:0006508
Chy05g00874 816 Gene3D - 368 533 - -
Chy05g00874 816 Pfam Fibronectin type-III domain 718 810 IPR041469 -
Chy05g00874 816 Pfam Subtilase family 153 634 IPR000209 GO:0006508|GO:0008236
Chy05g00874 816 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Chy05g00874 816 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Chy05g00874 816 PRINTS Subtilisin serine protease family (S8) signature 595 611 IPR015500 -
Chy05g00874 816 SUPERFAMILY Subtilisin-like 128 677 IPR036852 GO:0004252|GO:0006508
Chy05g00874 816 CDD PA_subtilisin_like 375 513 - -
Chy05g00874 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Chy05g00874 816 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
Chy05g00874 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Chy05g00874 816 SUPERFAMILY Protease propeptides/inhibitors 85 126 - -
Chy05g00874 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 815 IPR045051 -
Chy05g00874 816 Gene3D - 690 813 - -
Chy05g00874 816 CDD Peptidases_S8_3 129 632 IPR034197 -
Chy05g00874 816 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
Chy05g00874 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Chy05g00874 816 PANTHER CUCUMISIN-RELATED 14 815 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02268 Chy05g00874 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00053 Chy-Chr2:407234 Chy05g00874 Chy-Chr5:12920391 0 dispersed
Chy05g00874 Chy-Chr5:12920391 Chy12g00529 Chy-Chr12:7368197 1.80E-165 dispersed
Chy07g01161 Chy-Chr7:16515840 Chy05g00874 Chy-Chr5:12920391 9.62E-06 dispersed
Chy05g00874 Chy-Chr5:12920391 Chy01g02163 Chy-Chr1:26261165 2.41E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00874 - - csv:101219351 1616.28