Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00899 ATGGCTGCTGATTCTTCCTGTGATGGTGCTATTTTCGACTTGCCAAAATGTAGTAAGTTGACTATGCAAGAGAAGAGAGAACTTGTACATGAAATTTCAAAGTCAAATGGTGCAAGTGAGACACTGCAGTCATGGAGCCGTCAAGATATTCTACAGGTCCTGTGTGCAGAGATGGGGAAAGAAAGAAAATATACAGGCTTGACGAAGCAGAAAATAATTGAGCATCTTTTGAGACTTGTATCCGAAAAGAAGTCTTCTGTGTCTGAGGTTTTGAAAAATCTTGAGCCACAGTCTCCTTCAGGTGGTCATAAAACTACCAAAAGGCAGAGGAAATCTGAGCATGTAGCTCAACTTTCTGTTCCTGCAACTGACTTTCCAACCAGCAGTTCTCATAATGATTTGGTTAGTACGGCTTGCTGCAAAAACTTGGCTTGTCGAGCAACTCTAAATCCAGGAGATGCATTTTGTAGAAGGTGTTCATGCTGCATCTGTCGTCAGTATGATGATAACAAGGATCCTAGCTTGTGGATAAGTTGCAGTGCAGAGCCTCCATTTCAAGGTGACTCATGCAACATGTCATGTCATCTTGAATGTGCTTTGAAAGATGTAAGATCGGGAATTTTGAAAGCTGGACGAAGCAAGGGAATTGATGGGAGCTTCTACTGTGTGTCTTGTGGGAAATTAAATGATTTGCTTGGGTGCTGTAGAAAACAACTTATTCATGCAAAAGATACAAGAAGAGTCGACATACTGTGCTATCGTGTCTCTCTGAGCCAAAAGCTTCTCCATGGAACTGAAAAGTATAAAGTGCTTTATCAGATTGTTGATGAGTCTGTGAGGAAGCTTGAAGAGGAAGTGGGACCAATAGCCGGTGTACCAGTAAAGATGGGTAGAGGTATTGTAAACAGGCTTTCGTCCGGCCCTGAAGTTCAAAAACTCTGTGCTTCTGCTATTGAGTTATTGGACTCGATGGTCTCCAGCCAATCCTTGCATCTTTCACCTAATCCTGACGTTCAAGATGCAAATTTTGTTCCTGCAAACATGATTAGATTTGAAGATGTTAAGTCAACATCCCTCACTCTAGTTTTGAGTTATGAAAATGGATCCTCCGAGAACCAGATCGGGTTCACCTTATGGCATCGTAAGGCAGATGATGCAGATTACCCGGCAGAACCAACATGTATTCGACGACAACCGAAGGCGAGGTGTCTTGTGATGGGACTATCACCTGCTACCAAATATCATTTCAAAATTGTTCAGTTTGAGGGGACAAGGGAGTTGAGGGAATTTGAAGTTCAGTTCTCAACAATTGGGGAGGTAGAAGAGAACCCAGGCTGTTTAGAAATTGAGAGAAGCCAAAGTCACGCAACCAACTGTAGCGACCTTTCTAATCCTTCTTCAGTTGAAGACGAAACTACTGACATTCTTCCCTATGGTGATCGGACCAATAACCTAGGAAAACACTCCCCTGCCTATTCAAAGGGCATCGAAATACTTTCCTCGGCTATATTATCCACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAATGCCTGCAGGAACAGTTTCTGCTCTGAATGAGGCAACTGCTGCAGGAATGGTTGGTTTGATTCCCAACTCTGCTGGATCTAAGCTCGAGAACAGGCATGGACCAGCTGCCCCAAAACTCAACACCGATAATCAGTTAAGTACCCTTGTTCGGTCTGGAATGGATGGCCAGCAATTTGTTAGCTGTTCTCAAGATGGTTTGCCTATTACTCCCTGCAAGCTTGAAGTGCTAAAGGATAGTCTTGGTAGGGGTGAGAGACCAAAATCCAACTGCAAGGACCAGGAAAATAGGACTCGAAAAGGAGGGGAACCCCAAGATGGTGGCACGTCAAAGATGAGAACTGGGGAAAGACAGGATGACAAATGTGCTGAAAATGGTGTTTCAGATCGGGATTTCGAGCATTATGTGAAGTGTGGCAATGTGTTTTTGCTTCTATTTCACATCTTCTTGAGGCCAACCTGA 2016 43.55 MAADSSCDGAIFDLPKCSKLTMQEKRELVHEISKSNGASETLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLVSEKKSSVSEVLKNLEPQSPSGGHKTTKRQRKSEHVAQLSVPATDFPTSSSHNDLVSTACCKNLACRATLNPGDAFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDVRSGILKAGRSKGIDGSFYCVSCGKLNDLLGCCRKQLIHAKDTRRVDILCYRVSLSQKLLHGTEKYKVLYQIVDESVRKLEEEVGPIAGVPVKMGRGIVNRLSSGPEVQKLCASAIELLDSMVSSQSLHLSPNPDVQDANFVPANMIRFEDVKSTSLTLVLSYENGSSENQIGFTLWHRKADDADYPAEPTCIRRQPKARCLVMGLSPATKYHFKIVQFEGTRELREFEVQFSTIGEVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRTNNLGKHSPAYSKGIEILSSAILSTDAFNLSDNGEEGMPAGTVSALNEATAAGMVGLIPNSAGSKLENRHGPAAPKLNTDNQLSTLVRSGMDGQQFVSCSQDGLPITPCKLEVLKDSLGRGERPKSNCKDQENRTRKGGEPQDGGTSKMRTGERQDDKCAENGVSDRDFEHYVKCGNVFLLLFHIFLRPT* 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 13389887 13395426 - Chy5G099450.1 Chy05g00899 227126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00899 671 MobiDBLite consensus disorder prediction 601 641 - -
Chy05g00899 671 Pfam PHD - plant homeodomain finger protein 140 259 IPR032881 -
Chy05g00899 671 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 655 IPR044514 GO:0010048|GO:0040029
Chy05g00899 671 MobiDBLite consensus disorder prediction 91 115 - -
Chy05g00899 671 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 655 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02233 Chy05g00899 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01316 Chy-Chr3:16143816 Chy05g00899 Chy-Chr5:13389887 8.43E-108 dispersed
Chy05g00899 Chy-Chr5:13389887 Chy05g01355 Chy-Chr5:17662570 2.93E-81 dispersed
Chy02g02233 Chy-Chr2:26407056 Chy05g00899 Chy-Chr5:13389887 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00899 - - csv:101222501 1291.17