Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00951 ATGGATCATGATGAACAAAGGAACGGCCAAGACTTCATCTTCAAGTCAAAGCTCCCAGACATTTACATCCCAAACCACCTCCCTCTCCATACCTATTGCTTTGAACACCTCTCCCAATTCCAACACCGGCCTTGCCTCATCAACGGCACCACCGGCCGCATCCACACCTACGCCGAGGTCCACCTAGCAGCAAGACGTTTTGCTGCGGGGCTGAGCAAGATCGGTATCGGACAAGGTGACGTGATAATGCTCATGCTCCAGAATAGCCCCGAGTTCGTGTTTGCGTTCCTCGGTGCATCGTTCGCCGGTGCAATTGCCACGACCGCGAACCCGTTGTATAAGCCAGGAGAGATAGTGAAGCAGGCGGTGGCAGCGAAGGCGAAGGTGATAATTACACAAGGGGAGTTTGTGGAGAAGGTGTGGGAATTTGCGGTGGAACATGGGGTGAAGATATTGTGTACGGATTCTTCGTCGGCCTCGGAGTCAGCGGGTTGTTTGAAATTCTCGGAGGTTATGGAGGCCGATGAGAATGAGATTCCAGCGGTGAAGATTAATTCAAATGATGTTGTTGCTCTTCCTTTCTCGTCGGGAACTACTGGAGTTCCAAAAGGAGTTATGCTAACGCATAAATCTCTTGTTACAAGCGTAGCTCAGCAGGTGGATGGAGAGAATCCAAATGTAAACATGAATAGGAAGGATGTGATCATATGTGTTCTTCCTTTATTCCATATATATTCTCTCAACTCTGTTCTCCTCTGTGGACTACGTGTCGGCGCTGCCATTCTCATCCTTCAAAAGTACGACATCTCCTCTCTTCTCCGTCTCATTCAAACCCACAAAGCCACAATTGCTCCCTTTGTCCCTCCCATCGTCTTGGACTTTGCCAAAACCCCCGACATCCATCGTTACGACTTGTCGTCTATTCGAATTGTCATGTCGGGTGCTGCTCCCATGGGGAAGGACCTCGAGGACACTGTCAAAGCTAAACTCCCCAATGCCATTCTTGGACAGGGATATGGAATGACGGAGGCAGGGCCAGTGCTGTCGATGTGTTTGGGATTTGCAAAGGAAGCATTCAAGGTAAAATCAGGTGCATGCGGGACAGTAGTAAGGAATGCTGAGATGAAGATCATACACCCTCAAACTTCTCTTTCTTTGCCTCGTAATAACCCTGGTGAGATCTGCATACGTGGCCCCCAGATCATGAAAGGTTACCTTAATAACAAAGAAGCAACTGAGAAGACTATAGACAAAGATGGGTGGCTCCACACAGGAGACTTAGGGTTCATCGACGATGACGATGAGATCTTCATTGTCGATCGGTTGAAGGAACTTATTAAATACAAAGGATACCAAGTTGCCCCAGCTGAGCTTGAAGCTCTCTTGACTTCAAACCCTAACATTACTTCAGCAGCTGTCATACCTATGGAAGATGAAGCAGCAGGAGAGATCCCTGTTGCATTTGTTGTTAGATCTAAAGGTTCCAAAATTAGTGAGAATGACATCAAAAACTATATTTCAGATCAGGTTATATATTACAAAAAAATCAGAAAGGTTTTCTTTGTGGACTCAATTCCAATGGCTCCTTCAGGAAAGATATTGAGGAAAATTTTAAAAGCTCAGTTGGAAGCTGGTGTATTTTAA 1644 46.47 MDHDEQRNGQDFIFKSKLPDIYIPNHLPLHTYCFEHLSQFQHRPCLINGTTGRIHTYAEVHLAARRFAAGLSKIGIGQGDVIMLMLQNSPEFVFAFLGASFAGAIATTANPLYKPGEIVKQAVAAKAKVIITQGEFVEKVWEFAVEHGVKILCTDSSSASESAGCLKFSEVMEADENEIPAVKINSNDVVALPFSSGTTGVPKGVMLTHKSLVTSVAQQVDGENPNVNMNRKDVIICVLPLFHIYSLNSVLLCGLRVGAAILILQKYDISSLLRLIQTHKATIAPFVPPIVLDFAKTPDIHRYDLSSIRIVMSGAAPMGKDLEDTVKAKLPNAILGQGYGMTEAGPVLSMCLGFAKEAFKVKSGACGTVVRNAEMKIIHPQTSLSLPRNNPGEICIRGPQIMKGYLNNKEATEKTIDKDGWLHTGDLGFIDDDDEIFIVDRLKELIKYKGYQVAPAELEALLTSNPNITSAAVIPMEDEAAGEIPVAFVVRSKGSKISENDIKNYISDQVIYYKKIRKVFFVDSIPMAPSGKILRKILKAQLEAGVF* 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14103681 14109026 - Chy5G099970.1 Chy05g00951 227178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00951 547 ProSitePatterns Putative AMP-binding domain signature. 192 203 IPR020845 -
Chy05g00951 547 Gene3D - 4 442 IPR042099 -
Chy05g00951 547 Gene3D - 443 545 IPR045851 -
Chy05g00951 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 543 - -
Chy05g00951 547 SUPERFAMILY Acetyl-CoA synthetase-like 15 544 - -
Chy05g00951 547 Pfam AMP-binding enzyme C-terminal domain 457 532 IPR025110 -
Chy05g00951 547 CDD 4CL 23 538 - -
Chy05g00951 547 Pfam AMP-binding enzyme 36 448 IPR000873 -
Chy05g00951 547 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 8 543 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01325 Chy-Chr4:19794468 Chy05g00951 Chy-Chr5:14103681 0 dispersed
Chy05g00951 Chy-Chr5:14103681 Chy10g00774 Chy-Chr10:13818401 1.54E-134 dispersed
Chy03g01455 Chy-Chr3:17125984 Chy05g00951 Chy-Chr5:14103681 2.67E-09 transposed
Chy04g02042 Chy-Chr4:26006671 Chy05g00951 Chy-Chr5:14103681 2.00E-132 transposed
Chy05g00089 Chy-Chr5:618173 Chy05g00951 Chy-Chr5:14103681 8.19E-19 transposed
Chy11g00511 Chy-Chr11:5586858 Chy05g00951 Chy-Chr5:14103681 0 transposed
Chy02g02216 Chy-Chr2:26272015 Chy05g00951 Chy-Chr5:14103681 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00951 K01904 - csv:101210868 1044.65