Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01011 ATGTCTGTTCAAGAGAAATTTTCTTCGTTGCCATCATCAAGTTCTGCTCGAGAGGTTGATCCATTGTTGAAGGATTTGAATGAGAGGAAGCAGAGCTTCAGGCGAAATGTTGTGTCGTTGGCGGCAGAGTTGAAGGAGGCTAGAAGCCGTCTTTCGTCTCAAGAACAATCGTTTGCTAAAGAGACTCAAACAAGGCAGGCATGTGATATTTTTGGATGTTTTGGGATTCTGAGGCATCTGGCTTTTTGTATCGAAGCAGAGACGAAGGCTAATATTATGGAACAAGAAATTGGGAGATTACATGCGGAATTGGAAGAAAGGGACGGACAACTCAAGGCTTCTGCAACTACTGCCACCAAGTATCTCCATGAGTTGGATGGATTAAGATTACAGCTTGTCGCCACTCAAGCGACTGCTGATGCGAGTGCTGCATCAGCTCAATCTGCACAGAACCAGTGTTTGGTGCTTTTGAAGGAATTAGACGAAAAGAACACTTCTATAAAAGAGTACGAAGATCGAGTAAAAAGGTTAGGAGAACAACTAGACAATCTACAGAAAGATCTCCAGGCAAGGGAATCTTCTCAGAAGCAACTGAAGGATGAAGTGATGAGAGTTGAGCATGATATTTTGGAAGCTTTAGCCAAATCTGGTGTGAGCAAGGATTGTGAATTGAGGAAAATATTATATGAAGTTTCCCCCAGAAATTTGGAGAAGATCAATAAGTTGTTGATTGCCAAAGATGAAGAGATAGCGAAACTCAAAAATGAAATCAAGATGATGTCTGCTCACTGGAAGCTTAAAACCAAGGAGTTGGAATCACAATTGGAGAAACAACGACGAGCCGACCAAGAGTTGAAAAAGAGGGTGTTAAAGCTGGAATTCTGTCTGCAAGAAGCTCGCACTCAGACGCGGAAACTTCAAAGAATCGGAGAGCGACGAGAGAAAGCCATAAAGGAACTGAGAGATCAGTTGGCAGGAAAACAAGGTGGAGCCTGTTCTGCAGCAGATGCCGAAAAGCATAACTTTTGGGAAACCTCAGGGTTCAAGGTGGTGGTTTCGATGTCGATGTTGATTCTTGGCTGTGGCAAAGAGCTTTCACATGTTGGCCTTGTAATAATCAACTACAACAAGCTCGCCAAGAATACAAAAGAAAACAAAGGCATGGCCACCAATGATCTGAACAAAGAGCTCTCAAAGAAAACAAACATATTTGGTCTAAAAGTATGGGAAGTCATTGGAATTGGAGTTGGCCTTTTCATAATCTCAATCCTCTGTATTCTCTCACTTTGTTTAACCTCATTCAACAAGAAATCAAAAAAATCATCACCACCCAAATTTCCTCTTACTCAAATCCCATCTCATTCAAAGGACATAAAGGCAATTCATATAACAACTACTGATCACAAAAAGCCAACGACAACCCAAATGGGAAAATTTGAAACCCATAATAATGATTACAGTGGTGAATCAGGAGGATCATTGTTTTATCCATTGAGTTATGGCTATGGGTCACAATCAGGAGATGAATGCAGCTCAGGAACTGTCACGACAACAACAATGTACCGACGTTCAACGTCGCCTACGACAACAACTATGACGGCTCCTTCGCCGTTGTTGGGCATGCCGGAGATGTCGCAATTGGGGTGGGGGTATTGGTTTACTTTGAGAGAGCTGGATTTGGCAACTAATTTGTTCTCAGAAGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTTTAGAGGAAGGTTGTTGAATGGGACACCAGTGGCAGTTAAGAAGATTTTTAATGGACAAGGCCAAGCAGAGAAAGAATTTAGAGCAGAAGTTGAGGCAATTGGGCATGTAAGACACAAGAATCTTGTTCGTCTTTTGGGATATTGCATTGAAGGGACTCATAGGATGTTGGTGTATGAGTACATAAACAATGGAAGCTTGGAGCTATGGCTACATGAAGGAATGGGAGAGAATACATATCTTACATGGGAGGCTAGAATGAAGATTATGTTGGGGACAGCCAAAGGAATTGCATACTTACATGAAGCCATTGAGCCAAAGGTGGTGCATAGAGACATAAAGGCCAGCAACATACTAATAGATGAAAATTTCAATGCTAAAGTATCAGATTTTGGGTTAGCAAAGTTGATGGATGCTAACAAAACTCATGTCACAACAAGAGTTATGGGCACATTTGGTTATGTGGCTCCTGAATATGCAAACACCGGACTTTTGAATGAGAAGAGCGATGTGTATAGCTTTGGAGTTGTGTTGGTGGAAACAATCACAGGAAGAGATCCAGTGGACTATGGACGTCCACCCAAACAGGTGAACGTGGTGGATTGGTTAAAAATGATGATTGGAAGTAGGAGATGTGAAGAAGTGGTAGACCCAAAAATAATAGGGGTTGGAGGAAGGCCATCGACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCATTGAGATGTGTTGATCCTGATTTTGACAAGAGACCAAAAATGGGCCAAGTTGTTAGAATGCTTGAATCTCAACATCATCATTCATTATAA 2544 41.75 MSVQEKFSSLPSSSSAREVDPLLKDLNERKQSFRRNVVSLAAELKEARSRLSSQEQSFAKETQTRQACDIFGCFGILRHLAFCIEAETKANIMEQEIGRLHAELEERDGQLKASATTATKYLHELDGLRLQLVATQATADASAASAQSAQNQCLVLLKELDEKNTSIKEYEDRVKRLGEQLDNLQKDLQARESSQKQLKDEVMRVEHDILEALAKSGVSKDCELRKILYEVSPRNLEKINKLLIAKDEEIAKLKNEIKMMSAHWKLKTKELESQLEKQRRADQELKKRVLKLEFCLQEARTQTRKLQRIGERREKAIKELRDQLAGKQGGACSAADAEKHNFWETSGFKVVVSMSMLILGCGKELSHVGLVIINYNKLAKNTKENKGMATNDLNKELSKKTNIFGLKVWEVIGIGVGLFIISILCILSLCLTSFNKKSKKSSPPKFPLTQIPSHSKDIKAIHITTTDHKKPTTTQMGKFETHNNDYSGESGGSLFYPLSYGYGSQSGDECSSGTVTTTTMYRRSTSPTTTTMTAPSPLLGMPEMSQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVFRGRLLNGTPVAVKKIFNGQGQAEKEFRAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYINNGSLELWLHEGMGENTYLTWEARMKIMLGTAKGIAYLHEAIEPKVVHRDIKASNILIDENFNAKVSDFGLAKLMDANKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPPKQVNVVDWLKMMIGSRRCEEVVDPKIIGVGGRPSTRGLKRVLLVALRCVDPDFDKRPKMGQVVRMLESQHHHSL* 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14772801 14782881 + Chy5G100570.1 Chy05g01011 227238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01011 847 Coils Coil 236 256 - -
Chy05g01011 847 Coils Coil 268 288 - -
Chy05g01011 847 ProSitePatterns Protein kinases ATP-binding region signature. 571 594 IPR017441 GO:0005524
Chy05g01011 847 SMART serkin_6 565 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01011 847 Gene3D Phosphorylase Kinase; domain 1 543 640 - -
Chy05g01011 847 CDD STKc_IRAK 571 840 - -
Chy05g01011 847 Pfam Protein kinase domain 566 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01011 847 Gene3D Transferase(Phosphotransferase) domain 1 641 846 - -
Chy05g01011 847 PANTHER OS01G0323000 PROTEIN 393 844 - -
Chy05g01011 847 Coils Coil 23 57 - -
Chy05g01011 847 Coils Coil 160 201 - -
Chy05g01011 847 PANTHER OS01G0323000 PROTEIN 393 844 - -
Chy05g01011 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Chy05g01011 847 Gene3D - 83 227 - -
Chy05g01011 847 ProSiteProfiles Protein kinase domain profile. 565 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01011 847 SUPERFAMILY Protein kinase-like (PK-like) 545 842 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01011 Chy-Chr5:14772801 Chy11g01010 Chy-Chr11:14271081 0 dispersed
Chy05g01011 Chy-Chr5:14772801 Chy01g00887 Chy-Chr1:8089751 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71277 PF00069 Pkinase 5.50E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01011 - - csv:101217212 863.603