Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01017 ATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTATAGACAGATTTTTGGCACTTTGGCCATTGCTCCTTTTGCCTTTCTTACTGAAAGGAAAACAAGGCCAAATATCACTTTTGCAGTTTTGTTTCAAATCTTTGTGTGTTCCTTATCAGGAGCAACAGGGAACCAGATATTCTTCTTTGTTGGGTTAAAGTACACAAACCCAACAATTTCAAGTGCTATGGCCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTCTTCAGACAAGAGAGTGTGAGAATCAAGACCAAATCTGGTTTTGCAAAGGTAATAGGGACAATTGTGTGTGTAAGTGGGGCAATGCTACTGTCTTTCTACCATGGACACACCATCAACTTAGGTGAATCAAAAATTCATTGGTCATATGTTGAGAGATTGATCAAGGAAACAACCCCGACGAACGGTCAAGGAAAGCACGTACTCGGTTCGATTTTGTTGCTTTTGAGCTCTTTTTCATGGGCATTATGGTTTGTCATCCAAGCAAGATTGAGTGTCAAGTTCAAAGCTCCCTATACAAGTACTGCATTGTTGTGCTTCATGGCCTTTTTTCAATGTGGACTTATAGCTGTGATTTCAGAGCACAATATTGCTGCTTGGTCTTTGAAAAGTTCGATCCGACTCGTTGCAGCTCTTTATGCAGGAGTTGTGTGTTCTGCATTGACATTTAGTATCACTTCATGGACTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCTCCCCTTTATTGCTTATCATTGTGGCCATCCTTAGTTGGGCTCTCCTCCATCAACAACTCTACGCTGGAACTGTTGTTGGCTCTGTTTTGATAATTCTTGGGCTTTATGCTGTGCTATGGGGAAAATCCAAAGAGATGAAAGTAGAAGATGCTCAACACAACATGGAAAAGCCAACAATGGAAAAGCATAATGGAAATCATATTATAGAAGAGAAGGATGATTTTGAATTGCAAATCACAAACATCAAGTAA 1020 40.0 MQSGMNPLVLLTYRQIFGTLAIAPFAFLTERKTRPNITFAVLFQIFVCSLSGATGNQIFFFVGLKYTNPTISSAMANVLPAATFILAVLFRQESVRIKTKSGFAKVIGTIVCVSGAMLLSFYHGHTINLGESKIHWSYVERLIKETTPTNGQGKHVLGSILLLLSSFSWALWFVIQARLSVKFKAPYTSTALLCFMAFFQCGLIAVISEHNIAAWSLKSSIRLVAALYAGVVCSALTFSITSWTIQRKGPLYVSIFSPLLLIIVAILSWALLHQQLYAGTVVGSVLIILGLYAVLWGKSKEMKVEDAQHNMEKPTMEKHNGNHIIEEKDDFELQITNIK* 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14813206 14815831 + Chy5G100630.1 Chy05g01017 227244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01017 339 PANTHER WAT1-RELATED PROTEIN 1 313 IPR030184 GO:0016021|GO:0022857
Chy05g01017 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 13 121 - -
Chy05g01017 339 Pfam EamA-like transporter family 157 295 IPR000620 GO:0016020|GO:0016021
Chy05g01017 339 Pfam EamA-like transporter family 3 119 IPR000620 GO:0016020|GO:0016021
Chy05g01017 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 300 - -
Chy05g01017 339 PANTHER WAT1-RELATED PROTEIN 1 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01017 Chy-Chr5:14813206 Chy12g00604 Chy-Chr12:8577060 2.01E-146 dispersed
Chy05g01017 Chy-Chr5:14813206 Chy03g01417 Chy-Chr3:16911876 2.12E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01017 - - csv:101217670 649.047