Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01038 ATGGAATTTGAACAACAGCAAGAAGCACTTCTGTTGGAAAAAGTTTGTGCCCTTTACAACCAAATCTCAAGCCTTTCTAGCCTTGAGCCTTGTAAAAATGTCGACACTCTTTTCACTCAACTCGTCCTCACGTGCTCACAGCACCCACCTCCCCCTATTGGCTTTGATATTGCTTCTTTGTCTCAGCCACTTCGAGCCATGAGGGCTCATCTCATTCAACTTTGTGCTCAAGCCGAGGCTCTTCTTGAACTTCATTTCTCTTCCCTTTTGGCTTCTTCTTTTCATCATCCTATTTCTAATTTGTCTATCTTCCCTTACTACTCTAATTACTTGAAGCTTTCCCTTCTTGAGTTTGATATTCTTCGATCTCATTCTCGTCGTATCCCCGATAAAGTTGCCTTTGTTGGCTCCGGTCCCCTCCCGCTCACCTCCATTGTCTTGGCGTCTATTCATCTTAAGGGTACTATTTTCCACAACTTTGACATTGATCCAACAGCAAACACCATGGCAAGTCAATTGGTTTGCTCTGACCCAGACTTATCACAAAGAATGATATTTCACACAAAAGATGTAATGGAAGTAACAAAGGGATTAAAAGATTATGAAGTAGTGTTCTTAGCAGCATTAGTTGGATTAGAAGAGGAAGAAAAAGGAAGAGTTTTAAAGCATTTGGGGAAACATATGGCAGCTGGTTCATATTTGATGCTAAGAAGTGCTCATGGAGCAAGAGCATTTTTGTACCCTGTTGTTGATATTTGTACTGTTGAAGCTTCTGGATTTGAGATTTTGTCTGTGTTCCATCCCACCGATGAAGTTATTAACTCTGTGGTTATTGCAAGGAAGAAAGTCATGTTCGATCAAAGCTCGTACGAGGACGAGGACGAGGACGAGGACGAGAAGCAAGGTATTTTAGTCAATACTTCCTCTATTGTGTTGGCTGAGAAATGCTCTGGGTTTAATGGCTTTACTCCCATGATTGAAGAGCAACTTTCTTGA 996 41.47 MEFEQQQEALLLEKVCALYNQISSLSSLEPCKNVDTLFTQLVLTCSQHPPPPIGFDIASLSQPLRAMRAHLIQLCAQAEALLELHFSSLLASSFHHPISNLSIFPYYSNYLKLSLLEFDILRSHSRRIPDKVAFVGSGPLPLTSIVLASIHLKGTIFHNFDIDPTANTMASQLVCSDPDLSQRMIFHTKDVMEVTKGLKDYEVVFLAALVGLEEEEKGRVLKHLGKHMAAGSYLMLRSAHGARAFLYPVVDICTVEASGFEILSVFHPTDEVINSVVIARKKVMFDQSSYEDEDEDEDEKQGILVNTSSIVLAEKCSGFNGFTPMIEEQLS* 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14979736 14981540 - Chy5G100840.1 Chy05g01038 227265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01038 331 Gene3D Vaccinia Virus protein VP39 12 283 IPR029063 -
Chy05g01038 331 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 3 286 IPR004298 GO:0030410|GO:0030418
Chy05g01038 331 PANTHER NICOTIANAMINE SYNTHASE 3 1 285 IPR004298 GO:0030410|GO:0030418
Chy05g01038 331 Pfam Nicotianamine synthase protein 5 283 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy05g01038 Chy08g01076 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01038 Chy-Chr5:14979736 Chy05g01039 Chy-Chr5:14996651 1.39E-89 tandem
Chy02g02214 Chy-Chr2:26256628 Chy05g01038 Chy-Chr5:14979736 9.31E-93 transposed
Chy05g01038 Chy-Chr5:14979736 Chy08g01076 Chy-Chr8:17916883 2.81E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01038 K05953 - csv:101203651 595.119