Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01039 ATGTCGGAGCTTGGAGAACTTTACCACAAGATCTCCACTCTTGAGAGCCTCAAACCCTCTAAACATGTCAACTCCCTCTTCTCTCAACTTGTACTCCTCATTTGCACCCCTTCTTCCTCGTCCATCGACGTCTCCACGCTCTGCTCCACCATCCAAACCATGAGATCCCATCTCATCAAGCTCTGCGGCGAGGCCGAGTCCCTTCTCGAGCATCACTACTCCACCATTTTATCTTCCCACCAAAACCCTCTCGACCATCTCTCCCTCTTCCCTTATTACTCCAACTACCTCAAACTCACTCACTTAGAATTCTCCATTTTGAACCACCACGCCCCCCACAGTACTACTACGCCTCCCTCTAAAGTGGCATTTGTTGGCTCCGGTGCACTTCCCTTCTCGTCTATCATCATGGCCTTGAAGTACTTCCCAAAAACCGAGTTTCACAACTTCGACCTCGACCCGTCTGCCAATGCGAAAGCATCGATGCTGGTAGCAGGCGACGTGGAGCTGTCGAGGCGGATGGTGTTCCACACGACCGACATCATGGACGTCGGGTCGGAAGAGTTGAGGGAGTTCGAGGTGGTGTTTCTGGCGGCGTTGGTGGGGATGGAGAGAGAAGAGAAGGGGAAGGTGATCGAGCATTTGAGGAAGAATATGAGTGGTGGGGCGTTGTTGATGTTGAGGAGCGCATATGGTGCACGAGCGTTTGTTTATCCGGTGGTGGAAGCTTGTGATCTTCGGGGGTTCGAGATTCTTACG 759 52.31 MSELGELYHKISTLESLKPSKHVNSLFSQLVLLICTPSSSSIDVSTLCSTIQTMRSHLIKLCGEAESLLEHHYSTILSSHQNPLDHLSLFPYYSNYLKLTHLEFSILNHHAPHSTTTPPSKVAFVGSGALPFSSIIMALKYFPKTEFHNFDLDPSANAKASMLVAGDVELSRRMVFHTTDIMDVGSEELREFEVVFLAALVGMEREEKGKVIEHLRKNMSGGALLMLRSAYGARAFVYPVVEACDLRGFEILT 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14996651 15001120 - Chy5G100850.1 Chy05g01039 227266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01039 253 PANTHER NICOTIANAMINE SYNTHASE 3 3 252 IPR004298 GO:0030410|GO:0030418
Chy05g01039 253 Gene3D Vaccinia Virus protein VP39 1 253 IPR029063 -
Chy05g01039 253 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 253 IPR004298 GO:0030410|GO:0030418
Chy05g01039 253 Pfam Nicotianamine synthase protein 3 252 IPR004298 GO:0030410|GO:0030418
Chy05g01039 253 PANTHER SYNTHASE, PUTATIVE-RELATED 3 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02214 Chy-Chr2:26256628 Chy05g01039 Chy-Chr5:14996651 8.49E-83 dispersed
Chy05g01039 Chy-Chr5:14996651 Chy08g01076 Chy-Chr8:17916883 9.66E-83 dispersed
Chy05g01038 Chy-Chr5:14979736 Chy05g01039 Chy-Chr5:14996651 1.39E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01039 K05953 - csv:101219339 493.041