Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01052 ATGGCTCATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGACCGTGAAAAACAGGAGGTTGAGAGGGTTAAGTCGAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGACCTTGAGTCCCGATTGGGAAAGACCCAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATATTACTGTTCTGTTTGTGAATGTGTCGTCAAGGATTCTGCAAATTACTTGGATCACATCAATGGAAAGAAACATCAGAGGGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTCGAACAGGTGCAAGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACACCAGGCAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAACAACAAGAAGAGGAACAACGAAAGCGCGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCTGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCCAAGAAGTGA 609 45.48 MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVERVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGFGGFRSSKK* 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15071153 15073615 - Chy5G100980.1 Chy05g01052 227279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01052 202 SMART ZnF_U1_5 81 115 IPR003604 GO:0003676|GO:0008270
Chy05g01052 202 Gene3D Classic Zinc Finger 78 116 - -
Chy05g01052 202 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 7 202 IPR040107 GO:0000398|GO:0005681
Chy05g01052 202 MobiDBLite consensus disorder prediction 137 183 - -
Chy05g01052 202 Pfam Zinc-finger of C2H2 type 84 108 - -
Chy05g01052 202 MobiDBLite consensus disorder prediction 26 53 - -
Chy05g01052 202 Coils Coil 116 136 - -
Chy05g01052 202 MobiDBLite consensus disorder prediction 137 202 - -
Chy05g01052 202 SUPERFAMILY beta-beta-alpha zinc fingers 79 125 IPR036236 -
Chy05g01052 202 Coils Coil 22 42 - -
Chy05g01052 202 Coils Coil 144 181 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18027 PF12171 zf-C2H2_jaz 1.90E-06 CL0361 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01052 K12848 - csv:101206387 347.051