Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01066 ATGTCGACGAAGAGATTGATTTCCAGTGGAACGACTCCGTCGGAAGCTGAGCCGCCGAGGTTGTTTGCTTCAGCCTCGCACTCGTTCCGGCAATGTGTGGAATCGGCTAGGGTTTTTGAGGAGCTTCCGATTGTTTCCATTGTATCGGTTTCACGGCCGGATACTGGAGATATTAGTCCCTTGCTGTTATCTTACACCATTGAAATCCAATACAAACAGTTTAAATGGAGGTTAGAGAAGAAAGCATCGCAAGTTCTATATTTACATTTTTCATTGAAGAGACGTGCATTTATTGAAGAACTCCACGAGAAACATGAGCAGGTGAAAGAATGGCTTCACAACTTGGGAATAGTTGACCATCCAGCTGTAGTTCATCATGATGACGAGTCTGATGATGGGGCTTTTTCTTTGCATGATGAACAAACTACAAGAAACAGGAACGTTCCTTCTGTTGCTGCTTTACCTATCATTAAGCCAGCTCTGGGAGGACAGTGGTCCATTTCACACAAGGCAAAGCTAGCAATGCAGGGTTACTTAAATCACTTTTTTGGGAACTTGGATATTGTAAATTCTCGTGAGGTCTGCAAATTTTTAGAAGTCTCGAAGATGTCATTTGTAAGAGAACATGGTCCAAAGTTGAAAGAAGGTTACCTAATGGTGAAGCATTTAAAACAAGTCACAGGATCTGATTCTAGTATAAAATGTTTTGCATGTCATTGGTGCAGTTGCTGCATGTACAATTGGAAAAAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTGGCCTTGGTTGCTGATCCTATGGACTCTAAACTTCTAGATATAATTGTTTTTGATGTGCTACCAACGGTAGAAGAAAAGGAGGGATCCCAAGCATGCTTAGCATATCATGTCAAGGAGCGCAATCCTTTACGTTATTCATTCAAGGTTAGACGCAGAGATGGGGACATAAGGTTCAGGACCACAAGTACCGCCAAAGTCAGAGAATGGGTCTCATCAATTAATGATGCTGGTTTTGGAGCCAAAGATGGCTGGTGCCATCCTCATCGCTTTGGTTCTTTTGCTCCTCAGAGAGGTTTGAGTGATGATGAAAGCCAAGCTCAGTGGTTCATAGATGGCCGGGCAGCTTTTGAAGCAATTGCTTGCTCTATTGAGGCTGCTAAATCGGAGATATTCATCACTGGCTGGTGGCTTTGCCCTGAGCTTTATACGCGACGTCCTTTTCACAATCATTCTTCATCACGGCTTGACGCATTGCTGGAAACAAAAGCAAAAGAAGGTGTCAAGATTTACATCTTAATGTATAAGGAGGTTCCTATTGCTCTGAAAATTAACAGTATGTACAGCAAGAAGAGGCTTTTAAATATTCATGAGAATATTAAGGTATTACGTTCTCCCGATCATATGTCAACTGGGATTTATTATTGGTCACATCACGAAAAAATTGTCATTGTTGATCATCACATTTGCTTCATTGGAGGTTTGGATTTATGCTTCGGCCGGTATGATACAATGGAGCATAAAGTGAGTGATTTCCCTCCCTATACATGGCCGGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGAAGATACAATGAAAGATGAATTGGAACGGGAGAAGTGTCCCCGAATGCCATGGCATGATGTTCACTGTGCCCTTTGGGGATCTCCGTGCCGTGATATTGCACGACACTTTGTTCAGAGGTGGAACCATGCCAAGAGAAACAAGGCCCCAAATGAAGAAAAAATACCTCTACTTATGCCTCAACATGACATGGTCCTTCCACATTACATGGGAAAACGGACAGAGTTGAGCTTTAAAAATACAGACTCAGAGCAAGATCATCAGAAGCAGACCACAGATGATCTCTTTTCCTCCTTATCCCCACAGGATGATATTCCATTACTGATGCCTCAGGAAACTGGTGGACTTCCAGATTCTAACGAGCAAACAAATAATCTTTTGAACCACAATTCTTTTAATCAGCCCATGGAAATAAGAAGAAGTGTTACGGGTTCTTTCCAAGCATACAATGCTGAACCATGGACTCAATTTGAACAAACAAATGGATTGTTAGATGAATTTGGATTTTTGGATGAGTTTGGTGCTTTTGGTCATCTGAGGGAAGCTACTTTTGATACTCCACCATATATGAAAAATTCAAATGATTGGTTAGAAACTGAACGCGAAAGTAACCATGTTGCTATAAACGAGGTCAACGAAATTGGTCCCCTTACTAGTAGCAATTGTCAGGTAATAAGAAGTGTCAGCCAGTGGTCAGCAGGAACAAGCAAACCAGAAGCAAGTATTCATGCTGCTTATTGCTCTGCCATTCAAGAGGCAAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCTGGTTTATCAGGGGATGAGACCATACAAAATCGGGTTCTGGATGCATTATACCAACGTATATGGCTGGCTCATAAAGAAAAACAATGTTTCCGAGTTATTGTTGTTTTACCACTCTTACCTGGATTTCAGGGTGGTGTAGATGATAATGGTGCAGCAACTGTTCGAGCCTTGATGCATTGGCAGTACCGAACAATTAGTTGGGAAAAAACTTCGATACTGTACCGTCTCAATCTATTATTGGGTCCTAAAACGCAAGATTATATTTTATTTTGTGGCCTTCGATCATATGGCAGACTATTTGATGGTGGTCCAGTTGCTACAAGTCAGGTATATGTGCACAGCAAATTGATGATAATTGATGATTGTATTACCTTTATTGGTTCCTCCAATATCAATGATAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGAGTAATTATCGAGGATAAAGAGTTTGTCGATTCATCTATGAATGGAAAACCTTGGAAAGCTGGAAAGTTCGCTCATAGTCTACGATGTTCCTTGTGGTGTGAGCACCTCGGTCTTCATCTCAAAGAGGTCTGTCAGATCCTTGATCCTATTGTAGAAGCAACATACAAACATTTATGGTTAGCTACGGCAAAGGAAAACACAACAATATATGAAGAAGTCTTTTCTTGTATCCCCAATGACAACATAAACTCAAGATCGTCTTTACGCCAAAGTTTGGCCGATTTGAAGGTGAAACTTGATCATAACACACTAGATTTAGGAATAGCTGCTGAGAAGATAGAAAGCCATGAAAATGGGGAAGTAAAAATGATAGATCCAATGGAGAGATTGAAGTGTATTAGGGGACATCTAGTTTGTTTTCCTTTGAAGTTTTTATGGCAAGAAGATCTCAGGCCAGGGTTCATTGAAAGTGAGTTTTATGCTGCGCCTCATGTTTTCCATTGA 3333 40.89 MSTKRLISSGTTPSEAEPPRLFASASHSFRQCVESARVFEELPIVSIVSVSRPDTGDISPLLLSYTIEIQYKQFKWRLEKKASQVLYLHFSLKRRAFIEELHEKHEQVKEWLHNLGIVDHPAVVHHDDESDDGAFSLHDEQTTRNRNVPSVAALPIIKPALGGQWSISHKAKLAMQGYLNHFFGNLDIVNSREVCKFLEVSKMSFVREHGPKLKEGYLMVKHLKQVTGSDSSIKCFACHWCSCCMYNWKKVWAVLKPGFLALVADPMDSKLLDIIVFDVLPTVEEKEGSQACLAYHVKERNPLRYSFKVRRRDGDIRFRTTSTAKVREWVSSINDAGFGAKDGWCHPHRFGSFAPQRGLSDDESQAQWFIDGRAAFEAIACSIEAAKSEIFITGWWLCPELYTRRPFHNHSSSRLDALLETKAKEGVKIYILMYKEVPIALKINSMYSKKRLLNIHENIKVLRSPDHMSTGIYYWSHHEKIVIVDHHICFIGGLDLCFGRYDTMEHKVSDFPPYTWPGKDYYNPRESEPNSWEDTMKDELEREKCPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRNKAPNEEKIPLLMPQHDMVLPHYMGKRTELSFKNTDSEQDHQKQTTDDLFSSLSPQDDIPLLMPQETGGLPDSNEQTNNLLNHNSFNQPMEIRRSVTGSFQAYNAEPWTQFEQTNGLLDEFGFLDEFGAFGHLREATFDTPPYMKNSNDWLETERESNHVAINEVNEIGPLTSSNCQVIRSVSQWSAGTSKPEASIHAAYCSAIQEAKHFIYIENQFFISGLSGDETIQNRVLDALYQRIWLAHKEKQCFRVIVVLPLLPGFQGGVDDNGAATVRALMHWQYRTISWEKTSILYRLNLLLGPKTQDYILFCGLRSYGRLFDGGPVATSQVYVHSKLMIIDDCITFIGSSNINDRSLLGSRDSEIGVIIEDKEFVDSSMNGKPWKAGKFAHSLRCSLWCEHLGLHLKEVCQILDPIVEATYKHLWLATAKENTTIYEEVFSCIPNDNINSRSSLRQSLADLKVKLDHNTLDLGIAAEKIESHENGEVKMIDPMERLKCIRGHLVCFPLKFLWQEDLRPGFIESEFYAAPHVFH* 1111
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15184079 15193411 - Chy5G101120.1 Chy05g01066 227293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01066 1110 Gene3D Endonuclease Chain A 726 967 - -
Chy05g01066 1110 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 473 500 IPR001736 GO:0003824
Chy05g01066 1110 SUPERFAMILY Phospholipase D/nuclease 747 954 - -
Chy05g01066 1110 CDD PLDc_vPLD1_2_yPLD_like_2 766 950 - -
Chy05g01066 1110 SUPERFAMILY Phospholipase D/nuclease 343 593 - -
Chy05g01066 1110 PANTHER PHOSPHOLIPASE D ZETA 2 27 1107 - -
Chy05g01066 1110 CDD PLDc_vPLD1_2_yPLD_like_1 366 510 - -
Chy05g01066 1110 Pfam Phospholipase D Active site motif 475 500 IPR001736 GO:0003824
Chy05g01066 1110 MobiDBLite consensus disorder prediction 611 636 - -
Chy05g01066 1110 SMART PH_update 212 340 IPR001849 -
Chy05g01066 1110 PIRSF PLD_euk 43 517 IPR016555 GO:0004630|GO:0006654|GO:0048017
Chy05g01066 1110 PIRSF PLD_euk 513 629 IPR016555 GO:0004630|GO:0006654|GO:0048017
Chy05g01066 1110 PIRSF PLD_euk 713 1110 IPR016555 GO:0004630|GO:0006654|GO:0048017
Chy05g01066 1110 Gene3D - 201 338 IPR011993 -
Chy05g01066 1110 PANTHER PHOSPHOLIPASE D 27 1107 IPR015679 -
Chy05g01066 1110 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 906 933 IPR001736 GO:0003824
Chy05g01066 1110 SMART pld_4 906 933 IPR001736 GO:0003824
Chy05g01066 1110 SMART pld_4 473 500 IPR001736 GO:0003824
Chy05g01066 1110 CDD PH_PLD 189 336 - -
Chy05g01066 1110 Gene3D Endonuclease Chain A 358 615 - -
Chy05g01066 1110 SUPERFAMILY PH domain-like 209 342 - -
Chy05g01066 1110 Pfam PLD-like domain 779 953 IPR025202 -
Chy05g01066 1110 ProSiteProfiles PH domain profile. 211 338 IPR001849 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01066 Chy-Chr5:15184079 Chy11g01535 Chy-Chr11:21916084 0 dispersed
Chy05g01066 Chy-Chr5:15184079 Chy03g01122 Chy-Chr3:14515013 1.87E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01066 K01115 - csv:101220522 2266.5