Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01114 ATGCAAGATATCTTCGCTTCTGTTCGCCGATCATTGGTCTTTCGTCCTCCTCTCGACAACGATGATTCCCATTCCCCTGCAATTGGTGTTGGAGCCCTAGTTGATAAGATCAACTCCAGCATCCGCAAATCCAGAGTCTTCTCTAGACACTCCCCTTCCTCTTACTCTCTCCCTCCCATTCCTAAAGACACCGACCCTCCCATTCGATGGCGCAAAGGCGAATTGATTGGCTGTGGCGCCTTTGGTCGCGTTTATATGGGCATGAATCTTGGCTCTGGAGAGCTTCTTGCTGTCAAACAGGTTTTCCAATTTGGAGTTCCCTCTGCTGTTTTGTTGGATCTTCTTTTCATCGCTTTTTCTGTTCTTATCTTTCAGGTTTTGATTGCTGCAAATGGTGCTTCGAAGGAGAAAGCGCAGGCTCATGTTCAGGAGCTTGAGGAAGAAGTGAAACTTCTGAAGGATCTTTCTCATCCAAATATTGTTAGATACTTGGGCACAGTCAGAGAGGATGACTCTTTAAATATATTATTGGAATTTGTCCCTGGTGGATCGATAGCATCACTTCTGGGGAAATTTGGAGCCTTCCCTGAAGCAGTTTTAAGAACATATACAAAACAGTTATTATTGGGATTGGAGTATTTACACAAGAACGGTATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTAGATAACAAGGGATGCATTAAGCTTGCTGATTTTGGGGCTTCGAAACAGGTTGTCGAGCTGGCTACAATTTCAGGAGCAAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTAATTCTGCAGACTGGTCATAGTTTCTCTGCTGACATATGGAGTGTTGGATGCACCTTTATTGAGATGGCTACAGGAAAGCCTCCTTGGAGCCAACAGTATCAAGAGGTTGCTGCCCTTTTTCATATAGGGACGACGAAGTCTCATCCACCAATCCCTGAGCAGCTTTCGGTTGAAGCTAAAGATTTTCTGTTGAAATGTTTGCAGAAGGAACCAAACTTAAGACCAACTGCCTCTGAACTCTTGAAGCATCCTTTTGTTACAGGGGAGGAGGCACAATCTCAACTTATGTCACGTGATGCATGCACGGAGCCCCTGGAAATCCATTCACCACAATGTACTTCAGAACTTGAAATGAGTAAAACTCCACATCCTGGATCAAGCGATATTTGTAATTTGGATAGTTTGAGCTGCTCAAAGGTCTACTCTACAAATAAACTAGAAAGTGATATGTGGGGAAGAAACAGTGATGATGAAATGTGTCAGATTGATGACAAGGATGATTTTATGTTAGATGAAGTAAAAATTGGCTCTTCTATTATACATGAGAATATGAAGAGTTATAATCCAATTTGTGAGCCCTCTGATGATGAGGATTGCAAATTTGATAAAAGTCCAGTAGTAGACCGAGGAAGCAGTTCACATGAAGAAGCTCTTGCACCTGGAAGCTGTTCTGGAGCTTTCGACGAGGAACAAAACTTCTCATTTCCTAGTGGGCGATCACTTTCTGAAGATGAGGATGAGCTTACTGAATCAAAAATTAAAGCTTTCTTGGATGAAAAGGCTCTTGAATTGAAGAAACTGCAGTCACCGCTTTATGAGGAGTTCTACAATAGTTTGAATGCATCCTGCTCTCCAGTTTTTATGGAGAGCAAACAAGATGAAAGCACTCCTAAATACTTGAAATTGCCCCCGAAAAGTCGGTCACCAAGTCGAAGTCCTGGTAACCCATCCCCAGCACTTGATGCTTTTGGCACTGGTAGCCCAGGGAGCGGTAGCAGGGGTAATGCAAATGATCAAAGGTCACAACTCAACGATTGGAAAGGACTTCATGGTCAGTCAGAAGCTGGTAGCCCAAGTAAGAATTATTCTGAAATACAGAGGAAGTGGAAAGAAGAGCTTGATCAAGAGCTTGAGAGAAAACGAGAGATGATGCGTCAAGCTGGCGTGGGAGGCAAAACTTCATCTCCAAAGGATAAAGCCATGGGCAGGCCAAGAGAGCGGACACGGTTTGCATCTCCATTCCGGGATGATGTGTCGGGTGCTGGGAGGGACAACAGGGAAAACTTCATCTCCTGA 2109 44.0 MQDIFASVRRSLVFRPPLDNDDSHSPAIGVGALVDKINSSIRKSRVFSRHSPSSYSLPPIPKDTDPPIRWRKGELIGCGAFGRVYMGMNLGSGELLAVKQVFQFGVPSAVLLDLLFIAFSVLIFQVLIAANGASKEKAQAHVQELEEEVKLLKDLSHPNIVRYLGTVREDDSLNILLEFVPGGSIASLLGKFGAFPEAVLRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTFIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSVEAKDFLLKCLQKEPNLRPTASELLKHPFVTGEEAQSQLMSRDACTEPLEIHSPQCTSELEMSKTPHPGSSDICNLDSLSCSKVYSTNKLESDMWGRNSDDEMCQIDDKDDFMLDEVKIGSSIIHENMKSYNPICEPSDDEDCKFDKSPVVDRGSSSHEEALAPGSCSGAFDEEQNFSFPSGRSLSEDEDELTESKIKAFLDEKALELKKLQSPLYEEFYNSLNASCSPVFMESKQDESTPKYLKLPPKSRSPSRSPGNPSPALDAFGTGSPGSGSRGNANDQRSQLNDWKGLHGQSEAGSPSKNYSEIQRKWKEELDQELERKREMMRQAGVGGKTSSPKDKAMGRPRERTRFASPFRDDVSGAGRDNRENFIS* 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15678396 15682982 - Chy5G101600.1 Chy05g01114 227341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01114 702 SUPERFAMILY Protein kinase-like (PK-like) 69 399 IPR011009 -
Chy05g01114 702 Coils Coil 128 155 - -
Chy05g01114 702 Coils Coil 637 657 - -
Chy05g01114 702 Pfam Protein kinase domain 136 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01114 702 MobiDBLite consensus disorder prediction 558 702 - -
Chy05g01114 702 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 101 - -
Chy05g01114 702 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 123 615 - -
Chy05g01114 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Chy05g01114 702 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Chy05g01114 702 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 101 - -
Chy05g01114 702 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 123 615 - -
Chy05g01114 702 Gene3D Phosphorylase Kinase; domain 1 50 104 - -
Chy05g01114 702 Gene3D Phosphorylase Kinase; domain 1 120 180 - -
Chy05g01114 702 MobiDBLite consensus disorder prediction 599 634 - -
Chy05g01114 702 SMART serkin_6 70 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01114 702 MobiDBLite consensus disorder prediction 669 702 - -
Chy05g01114 702 CDD STKc_MAPKKK 69 357 - -
Chy05g01114 702 ProSiteProfiles Protein kinase domain profile. 70 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01114 702 MobiDBLite consensus disorder prediction 635 657 - -
Chy05g01114 702 Gene3D Transferase(Phosphotransferase) domain 1 182 385 - -
Chy05g01114 702 MobiDBLite consensus disorder prediction 476 500 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00223 Chy-Chr5:1844743 Chy05g01114 Chy-Chr5:15678396 0 dispersed
Chy05g01114 Chy-Chr5:15678396 Chy09g01038 Chy-Chr9:12879506 4.07E-79 dispersed
Chy05g01114 Chy-Chr5:15678396 Chy06g00957 Chy-Chr6:7050402 6.42E-80 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71278 PF00069 Pkinase 6.00E-65 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01114 K20606 - csv:101209358 1275.38