Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01167 ATGGGTGCTCAGAGAAAGGGAGCATCGCGGGTTTCCGACGACCATGAGGAGCTGGCACGAGTTTCATTGCAGGCTGTTCTTCTTGCCGATAGCTTTACCACTAAGTTTCGCCCCATAACGCTTGAACGCCCTAAGGTATTATTGCCGCTGGTAAATGTCCCGATGATTAATTATACCTTATCCTGGCTTGAATCGGCTGGTGTTGAAGAGGTGTTTGTATTTTGCTGTGCTAACTCGAAGCAAGTAATTGATTATTTGGAGAACTCTGAGTGGGTATCCCTACCAGACTTTGCAGTAAGAACTATACAGTCGCACAACTCCATTAGTGCTGGAGATGCCCTTCGTCTGATCTATGAAAGAAATGTGATACATGGTGATTTTGTACTTATCACTGGAGACACCATAAGCAACATGTCACTTACGCAAGCTCTTCAAGAACATAAAGAGAGAAAGAAGAAAGATAGTAATGCCGTAATGACGATGGTTGTCAAACGGTCAAAGCCTTCTCCTATCACACACCAATCTCGGCTTGGCACTGATGAACTATTTATGGCAATTGATCACAATACTAAGCAGCTGGTGTACTATGAGGACAAGGTTGACTATTCAAAAGGAATTATACATCTTGACAAGTCATTGATAATGGATAATTCTTCCATATCACTTCATAACGACATGCAGGACTGTTATATAGATATCTGCTCCCCAGAAGTACTCAGCCTGTTTACTGACAATTTTGACTACCAACATCTACGTCGTCATTTTGTCAAGGGCTTGCTCTTAGATGATATCATGGGTTACAAGATTTACACACACGAAATTTGCTCAAGCTATGCAGCAAGAATTGATAACTATCGAAGCTATGACACCGTTAGTAAGGACATAATACAAAGGTGGACATATCCGCTGGTACCCGATGTTAAATTCTTTGGGAACTCTACATATAAACTTGAAAGGCAGGGAATGTATCGAGCATCAGAAATACTGCAGGCACGCTCTGCCCAGGTTGGTTCGTTTACTGTTATTGGAGATAACAGCAAAATTGGTGACAACACCAAAATTACGAATTCAATTATTGGGCATGGTTGTAGTATTGGATCAAATGTTAAAATTGAAGGCTCTTATATATGGGACAATGTGACCATTGAAGATGGTTGTAAACTCAGTCATGCTATGGTATGTGATGGAGTTGTTATAAAGTCAGGAGCAGAACTGGAACCTGGTGTAATTTTGTCTTTCAAGGTTGTTGTAGGGGATCAGTTTACTGTTCCATCATATTCAAAGGTATCTTTGTTTGAGCAGCCAACCAATCAAGATAGCGATGAGGAGCTGGAATACGCAGATAATAGCAGTGGTATTGTAGAATTTGCAGATACAACAGACAAGTCAAATAGTGCACTGATGTCCAACCCACTGGAAATGCAAGGCTGGCCTGCATCTGAGCTAGGGAAGGGAGGTCTAGGTTATGTTTGGTCAATTTGTGAAGGAAGTGTCGAAGAAGAATGGAGGCATTCAGTTGCACCCATTCCTGCCGATAAACTCGAGAAGGTTCTGCATAAAGCACCAGATGACGAGGTGGAGTTAACTCAAGATGCTAATGTTTTACCACCTTCAGGGGAGTTGAAGTCCGACTCATATGTCTCAGACGGTGATGATAACGAAAGCTCTAGAGATGATTCCATCCACTTTGAGAAAGAGGTTGAAGCAACGTTTCTGAGGGCTGTGCATGAAAATATTGAAGTAGCCAATGTAATTTTGGAAGTAAACTCATTGCGGTTGTCATTTAATAAGGTGGCTTCAGATTGCGCAGGAGCAATATTTTATTCTCTGATGAACTTTGCCTTAGATTCTCCACGTGGTTCATCAAGTGAACTGCTGAAAAATACTACAAGTATAATTACAAAATGGAAAAAACTTTTGAAGTACTACCTAACTGACTTGGATGAAGAGATTGAAGTGATATTAAAATTTGAAGAGATATGCCTGGAATCTGCCAAGGAATTCACTCCACATTTTACCAAGATTTTGTGGCATCTATATGACCAAGAAATCATTCAAGAAGAGGCCATTCTGAAGTGGGATGCCGAGAAAAAGGAAGCGGATGATTCAGATAAGCATTTTGTCAAGCAGGCCGAGAAATTTATTGAAGTTCATAAAACCTGTGAGCAACGTGAACTCTTTAGATCTGGAAAACATCTTCAAACCCCAGCGAAGGAGATCTTTCTGAGCTAG 2232 40.99 MGAQRKGASRVSDDHEELARVSLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYTLSWLESAGVEEVFVFCCANSKQVIDYLENSEWVSLPDFAVRTIQSHNSISAGDALRLIYERNVIHGDFVLITGDTISNMSLTQALQEHKERKKKDSNAVMTMVVKRSKPSPITHQSRLGTDELFMAIDHNTKQLVYYEDKVDYSKGIIHLDKSLIMDNSSISLHNDMQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIYTHEICSSYAARIDNYRSYDTVSKDIIQRWTYPLVPDVKFFGNSTYKLERQGMYRASEILQARSAQVGSFTVIGDNSKIGDNTKITNSIIGHGCSIGSNVKIEGSYIWDNVTIEDGCKLSHAMVCDGVVIKSGAELEPGVILSFKVVVGDQFTVPSYSKVSLFEQPTNQDSDEELEYADNSSGIVEFADTTDKSNSALMSNPLEMQGWPASELGKGGLGYVWSICEGSVEEEWRHSVAPIPADKLEKVLHKAPDDEVELTQDANVLPPSGELKSDSYVSDGDDNESSRDDSIHFEKEVEATFLRAVHENIEVANVILEVNSLRLSFNKVASDCAGAIFYSLMNFALDSPRGSSSELLKNTTSIITKWKKLLKYYLTDLDEEIEVILKFEEICLESAKEFTPHFTKILWHLYDQEIIQEEAILKWDAEKKEADDSDKHFVKQAEKFIEVHKTCEQRELFRSGKHLQTPAKEIFLS* 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16144720 16158972 + Chy5G102130.1 Chy05g01167 227394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01167 743 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Chy05g01167 743 Gene3D Hexapeptide repeat proteins 318 454 - -
Chy05g01167 743 CDD W2_eIF2B_epsilon 558 716 IPR044123 GO:0005085|GO:0031369
Chy05g01167 743 MobiDBLite consensus disorder prediction 528 560 - -
Chy05g01167 743 Gene3D - 550 723 - -
Chy05g01167 743 SMART 542_3 637 724 IPR003307 GO:0005515
Chy05g01167 743 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Chy05g01167 743 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 303 IPR029044 -
Chy05g01167 743 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058|GO:0016779
Chy05g01167 743 ProSiteProfiles W2 domain profile. 557 728 IPR003307 GO:0005515
Chy05g01167 743 SUPERFAMILY ARM repeat 563 716 IPR016024 -
Chy05g01167 743 PANTHER - 10 723 - -
Chy05g01167 743 CDD LbH_eIF2B_epsilon 341 419 - -
Chy05g01167 743 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 723 - -
Chy05g01167 743 Pfam eIF4-gamma/eIF5/eIF2-epsilon 649 717 IPR003307 GO:0005515
Chy05g01167 743 SUPERFAMILY Trimeric LpxA-like enzymes 267 429 IPR011004 -
Chy05g01167 743 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01356 Chy-Chr2:10131604 Chy05g01167 Chy-Chr5:16144720 9.73E-23 dispersed
Chy03g00146 Chy-Chr3:1331815 Chy05g01167 Chy-Chr5:16144720 3.23E-10 dispersed
Chy05g01167 Chy-Chr5:16144720 Chy02g02549 Chy-Chr2:28754926 6.13E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01167 K03240 - csv:101217025 1388.63