Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01169 ATGGGATGTATAATAAGCCGAGAGGTAGCTTCCAGGAACTTAGCAGATTCTGAGGAGAAGAAGGAGAAGAGTTCTGAATGTGGTGAAGATTTGGAAAGAAAAGAAGCCGATGTGGCTGTTGTTGAGGTTGCTCAGGAGGAAGGGCATGGCCATGGGGGTCAGCCCTTGACAAAAGAGCAGAGAAGAAAGTTGAAACCTAACCCCAGGTTGAGTAATTTGCCAAAGCAATCTCAGGCGGAGCAGGTGGCTGCTGGATGGCCTTCCTGGCTCACAGCAGTCTGTGGGGAGGCACTCAATGGTTGGATTCCGAGGAAGGCTGATACATTTGAGAAGATTGATAAGATTGGACAAGGAACATACAGTAATGTGTACAAAGCAAAAGATATACTGACTGGTAAAGTTGTTGCATTGAAGAAGGTTCGTTTTGATAATTTAGAGCCAGAAAGTGTAAGGTTTATGGCCAGAGAGATTCTCATTTTGCGACGCCTAGATCATCCTAATGTTGTAAAATTAGAGGGTTTGGTTACGTCAAGGATGTCATGTAGTTTGTATCTTGTGTTTGAGTACATGGAGCATGATTTAGCTGGACTTGGTGCAAATCCATCCATCAAATTTACAGAGGCTCAGGTTAAGTGTTTCATGCAACAACTTCTATCAGGACTCGAGCATTGTCATAGCCACAGGGTGCTTCATCGCGATATTAAGGGTTCAAATCTTCTTATTGATGGTGAAGGGTTGCTTAAGATTGCTGACTTTGGACTAGCTACTTTCTTTGATCCAAAACAGAAGCACCCATTGACTAATCGTGTTGTAACCTTATGGTATCGATCCCCCGAGCTTCTACTCGGTGCGACTCACTATGGTGTAGGCATTGACCTTTGGAGTGCAGGTTGTATTTTAGCAGAGTTATTATCTGGGAGGGCCATAATGCCTGGCCGTACAGAGGTTGAGCAACTACATAAGATATTCAAGCTGTGTGGCTCAGCTTCAGATGAATATTTAAAGAGAGCAAAGTTGCCAAATGCAGCCTTATTTAGACCCCGAGAACCATATAAGAGATGCATAAAAGAGACATTTAAGGATTTCCCACCATCGTCATTTCCTCTTATCGAAACACTTCTTGCAATTGATCCAGCTGAGAGAATGACAGCTACAGATGCATTAAAGAGCGAGTTTTTCACTACAGAACCTTATGCTTGTGAACCTTCTAGCCTCCCCAAATATCCACCTAGTAAGGAGATGGATGCCAAACGACGAGATGATGAAGCACGAAGACAAAGAGCAGCAAGTAAATTGCAGAACGATCGTGTGAAGAAGACACGCACACGTAACCGTGCTGATGGAGCATATGTATCTATGGTGGCATATGGAAGGAAAGAAATGAGAGAACCTTTGAAGATAAGATTGTTCTATCTGACTTCTGAAATGCACGTTCTTCTGAAACAGAGACGGCGTCTAATTACTCATGCAAATGCAAAGAGCAAGAGCGAAAAGTTCCCCCCTCCACATCAGGATGGGGCACTCGGATTCACATTAGGATATTCACGTCATATTGATCCAGCTGTTGTTCCTTCTGATGTTCCTTTTAGCTCCACATCGTTTGGCTATCCAAACGAACTAGACCAAGCCTGGTCGGGTCCATTGGTTCAATCTTCTGACATCGGTGCTCAAGGGCAGAAACATTTGGGAGGTGATGCAAGAGAACAGCAATCTTCAGTTAAAGGAAAAAAGGCAGCATGA 1740 43.79 MGCIISREVASRNLADSEEKKEKSSECGEDLERKEADVAVVEVAQEEGHGHGGQPLTKEQRRKLKPNPRLSNLPKQSQAEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKVVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLGANPSIKFTEAQVKCFMQQLLSGLEHCHSHRVLHRDIKGSNLLIDGEGLLKIADFGLATFFDPKQKHPLTNRVVTLWYRSPELLLGATHYGVGIDLWSAGCILAELLSGRAIMPGRTEVEQLHKIFKLCGSASDEYLKRAKLPNAALFRPREPYKRCIKETFKDFPPSSFPLIETLLAIDPAERMTATDALKSEFFTTEPYACEPSSLPKYPPSKEMDAKRRDDEARRQRAASKLQNDRVKKTRTRNRADGAYVSMVAYGRKEMREPLKIRLFYLTSEMHVLLKQRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPAVVPSDVPFSSTSFGYPNELDQAWSGPLVQSSDIGAQGQKHLGGDAREQQSSVKGKKAA* 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16170734 16175437 - Chy5G102150.1 Chy05g01169 227396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01169 579 PANTHER OS01G0367700 PROTEIN 54 553 - -
Chy05g01169 579 MobiDBLite consensus disorder prediction 547 579 - -
Chy05g01169 579 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Chy05g01169 579 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Chy05g01169 579 MobiDBLite consensus disorder prediction 52 66 - -
Chy05g01169 579 MobiDBLite consensus disorder prediction 1 78 - -
Chy05g01169 579 Gene3D Transferase(Phosphotransferase) domain 1 192 433 - -
Chy05g01169 579 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01169 579 PANTHER CELL DIVISION PROTEIN KINASE 54 553 - -
Chy05g01169 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Chy05g01169 579 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01169 579 CDD STKc_CDK9_like 109 393 - -
Chy05g01169 579 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Chy05g01169 579 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01169 579 MobiDBLite consensus disorder prediction 12 44 - -
Chy05g01169 579 MobiDBLite consensus disorder prediction 411 441 - -
Chy05g01169 579 MobiDBLite consensus disorder prediction 400 441 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01127 Chy05g01169 CCT
Chy02g01127 Chy05g01169 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01169 Chy-Chr5:16170734 Chy06g00655 Chy-Chr6:4494701 0 dispersed
Chy02g01127 Chy-Chr2:7980635 Chy05g01169 Chy-Chr5:16170734 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71280 PF00069 Pkinase 6.00E-67 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01169 K08819 - csv:101217497 1042.34