Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01179 ATGGATGGTGTCGTCTCAGATCTTGAGCTTGATTGCTCTGAATTTGTTGAAGTTGATCCCACTGGCAGATATGGCAGATACAATGAAATTTTGGGAAAAGGGGCTTCAAAAACAGTTTACAGAGCATTTGATGAATATGAAGGAATTGAGGTGGCTTGGAATCAAGTGAAACTTTATGATTTCTTGCAAAGTCCTGAAGATCTGGAAAGACTTTACTGTGAGATTCATCTTTTGAAGACATTGAAGCATAGAAATATTATGAAATTCTATACTTCTTGGGTTGATATTGCCAATAGAAACATCAATTTCGTTACTGAAATGTTCACTTCCGGCACTCTTAGACAGTATAGGCTGAAACATAAGAGAGTTAATATTAGAGCAGTGAAGCATTGGTGCCGGCAGATTTTGAGAGGGCTTCATTATTTGCATAGCCATGAGCCTCCTGTAATCCATAGAGATCTCAAGTGTGACAATATCTTTGTTAACGGGAATCAAGGGGAAGTTAAGATTGGTGATCTTGGACTTGCAGCAATCCTCAGGAAATCTCATGCTGATCATTGTGTGGGGACCCCTGAGTTTATGGCTCCAGAAGTGTATGCAGAGGCGTACAACGAATTAGTCGATATATACTCATTTGGAATGTGCATTCTGGAGATGATAACTTTCGAATATCCGTACAGCGAATGCACACATCCCGCTCAAATCTATAAGAAAGTCATATCTGGGAAAAAACCAGATGCCTTGTACAAAGTGAAGGATCCCGAAGTGCGGCAGTTCATCGATAAGTGTTTGGCTACAGTTTCATATCGGCTCTCGGCAGCAGAGCTTTTGAATGACCCTTTTCTTCGAGTTGACAATGGCGAATATGATCTAAGACCTGTCGATTATGGAAGAGGATTGGACGATGTTTGCCCTCTTATAAGACAGCCTTATCTAGAACTTCATAGAAGTGACAGCTCCTTTTATACTGGATATCCATATGATTACAGTTTCGAAGCTTCAAGTGAATCTGGTTATCATCCAATTGATAATGAAACCAATGGGATTGAACTTTTTGAGTATTGTGAAGGTGAACATTCTGAGGATGTTGATATTAGCATTAAAGGGAAGATGAGTGAAGATGGTGGCATCTTCTTAAGACTTAGAATTGCAGATAAAGAAGGGCGTATCAGGAACATTTATTTTCCATTTGATGTCGAGACAGATACAGCATTGAGTGTTGCAACAGAAATGGTTGCGGAGCTAGATATGACAGATCAAGACGTGACAAGAATTGCTGATATGATCGATGGAGAAATTGCTTCCTTGGTGCCTGAATGGAGGCCAGGTCCGGGAATTGAGGAAACGCCCCGCTTTGCAAACCAAAGCTATTGTCATAATTGTGCTTCTTCTACTTACAACAGTGCTTCAAATGGTCTTCTGTCGAGAAATCAAGATGGAAAGAACTCAGAGGTAGCTCAATGTTGTGGACATCGATATGCTTCTATGCATGGTCGTTTTGAGGAGATAATGTATCAAGCTGACGAGCCAGAGCATCATACAGCAGAGGATGCACCAGATGTGTCGAGCCATCCTGATGGGCTGAATTATCCTGAAATATGGGGACATCATGAAAGCCGTGAACTTAGTTCAATGAGCTCACGACAAAGCCATTCAGATGAAGATTACGAGAAAACAGACCGACCAATTACAGACACAGACACAAAAGAAATTATCTTGGAAAGTAAAACCGCTCCTAATACGAGACGTACGCTTAGGAGCCTGATGAATTCTCTTTCTTTCTCAGAAAACCCTTCTCCTCCCGATATTAATGAGAATGATGTCCAACAAGAAATGAGATGGATTAAGGCCAAGTACCAATTAGAATTAAGCAATCTCAGAGATCAACAATTAAATCTTTCTTCAAAATCTTCAAGTTCTGAAGACAGACAACAAAAAATGGAAAATGCAACTCCTAGAGGCAACCACAACCAAATCCTTGACAGTTCTGGTCGAGACACGAACCGAAGTAGTACTGATAGCCATGTTTATATCAATAATAGCTGTTACAGTACAGACATGCCCAAGCAAAGGTCTCGAAATCGCATGGCTGTGGAGTCCTCTATTGTGGATAAAGTTGTCACTGCTAAAAATGCCTGCAATGGTTCGTTGCTTCCAAGCTCCCTCCATAGAACAATCTCTCTCCCAGTTGATGCTGTTCATATATAG 2208 40.76 MDGVVSDLELDCSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLHYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHCVGTPEFMAPEVYAEAYNELVDIYSFGMCILEMITFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFIDKCLATVSYRLSAAELLNDPFLRVDNGEYDLRPVDYGRGLDDVCPLIRQPYLELHRSDSSFYTGYPYDYSFEASSESGYHPIDNETNGIELFEYCEGEHSEDVDISIKGKMSEDGGIFLRLRIADKEGRIRNIYFPFDVETDTALSVATEMVAELDMTDQDVTRIADMIDGEIASLVPEWRPGPGIEETPRFANQSYCHNCASSTYNSASNGLLSRNQDGKNSEVAQCCGHRYASMHGRFEEIMYQADEPEHHTAEDAPDVSSHPDGLNYPEIWGHHESRELSSMSSRQSHSDEDYEKTDRPITDTDTKEIILESKTAPNTRRTLRSLMNSLSFSENPSPPDINENDVQQEMRWIKAKYQLELSNLRDQQLNLSSKSSSSEDRQQKMENATPRGNHNQILDSSGRDTNRSSTDSHVYINNSCYSTDMPKQRSRNRMAVESSIVDKVVTAKNACNGSLLPSSLHRTISLPVDAVHI* 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16269268 16272583 - Chy5G102250.1 Chy05g01179 227406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01179 735 Gene3D - 375 441 - -
Chy05g01179 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Chy05g01179 735 Gene3D Phosphorylase Kinase; domain 1 11 106 - -
Chy05g01179 735 MobiDBLite consensus disorder prediction 531 572 - -
Chy05g01179 735 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01179 735 CDD STKc_WNK 23 282 - -
Chy05g01179 735 Gene3D Transferase(Phosphotransferase) domain 1 108 288 - -
Chy05g01179 735 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 431 IPR024678 GO:0004674|GO:0005524
Chy05g01179 735 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 724 - -
Chy05g01179 735 MobiDBLite consensus disorder prediction 650 676 - -
Chy05g01179 735 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01179 735 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 724 - -
Chy05g01179 735 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01179 735 MobiDBLite consensus disorder prediction 630 676 - -
Chy05g01179 735 SUPERFAMILY Protein kinase-like (PK-like) 28 283 IPR011009 -
Chy05g01179 735 MobiDBLite consensus disorder prediction 512 583 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00898 Chy-Chr1:8326670 Chy05g01179 Chy-Chr5:16269268 0 dispersed
Chy02g01856 Chy-Chr2:20910043 Chy05g01179 Chy-Chr5:16269268 0 dispersed
Chy05g01179 Chy-Chr5:16269268 Chy11g01417 Chy-Chr11:20804445 6.98E-168 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71281 PF00069 Pkinase 9.10E-50 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01179 K08867 - csv:101219552 1431.0