Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01222 ATGGATTACGCCAAAAATTCTCCCACTTCGCCTTCTGTTTCTGCAAGCAATCGGCTACCAGGTAACACTGGAAATTTACACTCATTGGAATGCTTCCCCAGTCATAGAGGGAAGAGAATGGTTAGCGATAGTATTCATTCAGCTTTGGCATGTGATGACATTCTCACTGAAATCCTCCTTCGTTTGCCAGAGAAATCTATTTTCAAACTTATTCTCGTGTCCAAAAGATGGCTATCCTTGATTTGTAATTTTTCCTTTCGTCGTAGTTATGAAAAGCAATGGGGTGCGCACACTCGTCTTTTTGGCTTTTTTGTATGCAATTTTCTTTACATTGACAGACCACAAGATGGGGTGAGGCGCCCCCGGTCTGAGCCAGCTCTACCACTACTTTCAACTTGTCAAGAGAGTGATGATTTAGTATCATCTGGAATCTTAAGGAAACTTGGCTATTTTATTGACTACTCTGACGGGCTTCTTCTCTGTGGTCGTCACCCTAAACATTATTATGTCTGGGATTCTGTCACCAAGTACCGACGCCAACTTCCTCAACCTCAAAAGCACTACAAATATCTATGTACCGCATTCATTACAGAAGACCCGGGCTCAGATTGCGGAGATATTGTGTATAGAGTTGTTCGAGCAAACTGTGAATGCAGAGTTGATGTAATTAACACCATCTCTATAGAGACTTTCTCCTCTCGGACTTGGACATGGAAGCAATCCACTCTTGTTTGTTCTTCAGATTTTGCTTTGAGCCCGTGGACAGTAGGCACTGTGATTAAAGGAATTATCCACTGGTTTGGAACATATCGAAGTCTAGCGATTTATGATCCCGGATTCGGAGAAAGGCGCATAACTTCAATCAAGCTACCGACCGGTAAGCTGACTCAGGACTACGAGGACTCCATTTTAGGAGTGTCATCGGATGGGCTTTTGCAGTATGGTCAAAGTGGGAAGCTTGGATTGGAAACATGGGTTCTCTACAAGGAACAAGATGACTCCTCATCATCCTACACCATGGAATTGGACACTCATTACGAGTACCGGTGGATGCTACGACACAAATTAAGCTACAAAGACCTGTGGAAGCAGAACCCAAATTCAGGTCTTCGCTCTAAAGAAACTCAAATATTATCGTTTATTCGTCGAAACTCCGACTCTGTTTTCATTAGGTTGGGAACAAGCATCTACCAATGTAACATCAAAAGCAAAACACTGGAAGTGACTCCTTACCATCATGGTGATTTTTCTATTCCATGGGATTTTTGTAAAGTGGTGCCTTACTTTCAAAAGATTTGGCCCCAATCCCCTTTCCCTACCTCCCCAAACACAGGTACTCCAGTTAACATTATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGAAGTTGCTTGGCTTGATGGACAGGTGTCCAAGATTACAGGACAGGAAGCTGAGATCGAAGCCAGCAATGGAAAAAAAGTTGTTGCAAAATTATCCAAAATATACCCCAAAGATATGGAAGCTCCAGCTGGTGGCGTTGATGACATGACAAAGCTATCTTACTTGCATGAGCCTGGAGTTCTACAAAATTTAAAAATACGATACGAACTCAATGAAATTTATACATACACTGGAAATATTCTTATTGCTATTAATCCATTCCAAAGATTGCCTCATCTTTACGATGGTCACATGATGCAACAATACAAAGGAGCACCATTTGGAGAACTAAGTCCTCATGTTTTTGCTGTTGCTGATGTTGCATACAGGGCAATGATTAATGAGGGTAAAAGCAATTCAATTCTAGTCAGTGGTGAAAGTGGAGCAGGGAAAACTGAAACCACAAAAATGCTCATGAGGTACCTTGCATTTTTAGGTGGCCGGGCGGCCACTGAAGGACGAACAGTTGAGCAACAAGTGCTTGAGTCAAATCCAGTGCTCGAAGCTTTTGGAAATGCTAAAACTGTCAGAAATAACAATTCCAGTCGCTTTGGTAAATTCGTTGAAATCCAGTTTGACAAGCATGGGAGAATCTCAGGAGCAGCTATCCGAACTTACCTCCTCGAGAGATCTCGTGTTTGCCAAGTTTCTGATCCTGAGCGCAATTATCATTGCTTTTACCTCCTTTGTGCTGCACCTCAGGAGGAAATTGAAAAGTACAAGTTGGGAAATCCCAGGTCATTTCATTATCTAAATCAATCAAATTGCTATGAGCTGGTTGATGTAAGTGATGCTCATGACTATCTTGCCACTAGAAGAGCTATGGATGTTGTTGGAATAAGTGCGAAGGAGCAGGAAGCAATCTTTAGGGTTGTTGCTGCAATTCTTCATCTAGGAAACATTGTATTTACTAAGGGAAAAGATGTTGATTCATCAATTCCAAAAGATGACAAGGCCAAGTTCCATCTTAAAATGACTTCAGAGCTTCTCATGTGTGATAATGCTGGCCTTGAAGATGCATTATGCAAGCGTGTCATGATCACCCCTGAAGAAGTGATAAAACGTAGCTTGGATCCTCAAAGTGCAGCTGTTAGTCGTGATGGTTTGGCTAAAACTATATATTCTCGGCTATTTGACTGGCTGGTTGATAAAATTAATGTCTCAATTGGACAAGATCCTAAATCGAAGTCCCTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTCAAAGCTAACAGTTTTGAGCAGTTCTGCATTAACTTCACAAACGAGAAGTTACAGCAACATTTCAATCAGCACGTTTTTAAAATGGAACAAGAAGAATATACAAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTCGACAACCAAGATGTGTTAGATCTTATTGAAAAGAAACCTGGTGGAATTGTGGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCCACACATGAGACATTTGCTAACAAACTCTATCAGACTTTCAAAGCACATAAGCGGTTTATAAAGCCAAAACTTTCTCGAACAGATTTTACCATTGCCCATTATGCTGGAGAGGTTTTGTATCAATCTGATCAGTTTTTGGACAAAAACAAAGATTATGTAGTTCCTGAATATCAGGATTTGTTGGGTGCATCCAAATGTCCATTTGTTGCTGGTCTTTTCCCCCCTCTAAAAGAAGAATCTGCAAAATCTTCCAAGTTTTCTTCAATTGGATCTCGCTTTAAGCTACAACTGCAACAGTTAATGGAGACACTAAATTCCACAGAACCTCACTACATCAGATGTGTGAAGCCAAACAACCTCTTGAAACCTGCCATATTTGAGAATGTCAACATTATGCAACAACTGCGTTGTGGTGGTGTCTTAGAGGCAATCAGAATCAGCTGTGCTGGGTACCCTACTCGCCGTGCGTTCTTTGAATTCATTAACCGATTTGGAATTCTAGCTCAAGAATCCTTAGAAGGAAACTACGATGAAAAGACTGTTTGCAAAAAGATATTAGAAAAGCAGGGACTCAAAGGGTTTCAGATAGGTAAGACAAAAGTATTCCTGAGGGCTGGTCAGATGGCTGAATTAGATGCTCGGAGAGCAGAGGTATTGAGTAATGCAGCAAAGACTATTCAACGACGCACACGAACCCATATTGCTCGTAAACAGTTCATTGCATTACGAAAGGCAACCATATACGTGCAATCTAGATGGAGAGGAAAACTGGCTTGCAAACTTTTCAAGAATTTGAAGAGAGAGGCAGCTGCTGTGAAAATTCAGAAAAGTGCTCGAAGATTTCATGCAAGAAAAACCTACAAAAAATTACAAGCCTCAGTGCTTTATGTGCAAACTGGATTAAGGGCAATGGCAGCTAGGAATGAATTCAGATTTAGGAAGCAGACTAAGGCGGCAATTATCATTCAGGCTCGATGGCGTTGCCATAAAGCTGCCTCATACTATAAGAAACTTCAGAGAGGCTCAATAGTTGCACAATGTAGATGGAGGGGAAAAGTTGCTAGAAAGGAACTTAGAAAACTCAAATTGGCTGCAAGGGAGACTGGTGCACTTAAAGAAGCAAAGGACAAGTTGGAAAAGAAAGTGGAGGAACTTACTTGGCGCATACAGTTAGAAAAACGCCTGAGGACGGACCTGGAAGAGGCAAAAGCTCAGGAGATAGGAAAGTTACAAAATTCTTTGCAAGAACTGCAGACTAAAGTTGATGAAACTAACTCATTGCTCGTAAAGGAGCGAGAGGCTGTAAAGAAGGCTGTTGAAGAAGCACCTCCTGTTATTCAAGAAACACAAGTTCTGGTTGAAGACACCAAGAAAATTGATGATTTGACAACAGAAGTAGAAAGCTTAAAGACCTCACTGGAGACAGAGAAAAACAGAGCTGATGAATCTGAGAAAAAATGTAGTGAAGTAGAAAAGTCTAGAGAAGAACAACGTAAAAAGTTAGAGGATACAGAGAAAAAAGCTCATCAGCTCCAGGAGTCATTGACCAGGCTAGAAGAGAAGCTTTCCAATTTGGAATCAGAGAATCAAGTTTTGCGCCAACAAGCTTTGTCTATGGCACCTAATAAAATCCTCTCAGGACGGTCTAGATCAATTCTTCAGAGAGGTGCTGAAAGTGGTCATTATGGAGGAGAAGGGAGAACACCTATGGATCTACACAGCCCCTCTATTAACCAAAGGGATTCAGAAGTAGAGGATAAACCTCAAAAATCACTTAATGATAAACAGCAAGAGAATCAAGATTTGCTCATTAGATGTATTGCGCAGCACCTTGGCTTTGCAGGAAACAGGCCAATTGCTGCTTGTATCATCTACAAGTGTCTGCTTCAGTGGAGGTCGTTTGAAGTCGAACGCACCAGTGTGTTTGATAAGATAATTCAAACTATAGGCCATGCAATTGAGTCTCAGGATAACAATGATGTCTTAGCCTATTGGTTATCCAACGCTTCAACGCTTCTCCTACTGCTTCAGCGTACATTGAAAGCAAGTGGTGCTGCTGGAATGGCTCCACAACGCCGAAGATCATCGTCAGCTACAATATTTGGGAGGATGACGCAAAGTTTCCGAGGAGCTCCACAAGGAGTCAATCTATCCTTAATCAATGGTGGAACAAGTGGTGGAGTGGACACTTTAAGGCAAGTTGAAGCGAAGTACCCTGCTCTGCTTTTCAAGCAGCAGCTGACAGCTTATGTAGAGAAAATTTATGGAATGATAAGAGATAATCTGAAGAAAGAAATTTCTCCATTGCTAGGATTGTGCATCCAGGCACCAAGAACATCAAGGGCAAGTTTGGTGAAGGGATCTTCTCGTTCTGTTGCCAACACCGAGGCCCAGCGTGCCTTAATTGCTCACTGGCAAGGAATCGTGAAGAGCCTTGGAAACTTCTTAAACACCTTAAAAGCAAATCATGTACCCCCATTTTTGGTTCGCAAAGTCTTCATACAAATATTTTCTTTCATCAACGTTCAACTGTTTAACAGTCTTCTATTACGACGAGAATGTTGTTCATTTAGCAATGGTGAATACGTCAAAGCTGGGCTGTCCGAATTAGAGCATTGGTGTTATAAAGCTACTGATGAGTATGCAGGTTCTGCTTGGGATGAGCTAAAGCATATTAGACAAGCGATCGGATTTCTGGTTATTCATCAGAAGCCAAAGAAGACATTAGATGAAATAAGTCACGATCTGTGTCCGGTACTTAGTATACAGCAGCTGTATCGTATAAGTACGATGTACTGGGACGACAAATATGGCACCCATAGTGTTTCACCCGATGTTATATCCAATATGAGGGTGTTAATGACCGAAGATTCGAACCATGCAATTAGCAATTCATTTCTATTGGACGACGATTCAAGCATTCCATTCTCAGTTGATGATTTATCAAAGTCTATGGAACAAATAGACATCGGAGACATCGAACCACCACCGCTGATTCGGGAAAACTCTGGCTTTAGTTTCTTGTTACCACGAACAGACTAA 5919 41.38 MDYAKNSPTSPSVSASNRLPGNTGNLHSLECFPSHRGKRMVSDSIHSALACDDILTEILLRLPEKSIFKLILVSKRWLSLICNFSFRRSYEKQWGAHTRLFGFFVCNFLYIDRPQDGVRRPRSEPALPLLSTCQESDDLVSSGILRKLGYFIDYSDGLLLCGRHPKHYYVWDSVTKYRRQLPQPQKHYKYLCTAFITEDPGSDCGDIVYRVVRANCECRVDVINTISIETFSSRTWTWKQSTLVCSSDFALSPWTVGTVIKGIIHWFGTYRSLAIYDPGFGERRITSIKLPTGKLTQDYEDSILGVSSDGLLQYGQSGKLGLETWVLYKEQDDSSSSYTMELDTHYEYRWMLRHKLSYKDLWKQNPNSGLRSKETQILSFIRRNSDSVFIRLGTSIYQCNIKSKTLEVTPYHHGDFSIPWDFCKVVPYFQKIWPQSPFPTSPNTGTPVNIIVGSHVWIEDPEVAWLDGQVSKITGQEAEIEASNGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQVSDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSNCYELVDVSDAHDYLATRRAMDVVGISAKEQEAIFRVVAAILHLGNIVFTKGKDVDSSIPKDDKAKFHLKMTSELLMCDNAGLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINVSIGQDPKSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKAHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEYQDLLGASKCPFVAGLFPPLKEESAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGILAQESLEGNYDEKTVCKKILEKQGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKTIQRRTRTHIARKQFIALRKATIYVQSRWRGKLACKLFKNLKREAAAVKIQKSARRFHARKTYKKLQASVLYVQTGLRAMAARNEFRFRKQTKAAIIIQARWRCHKAASYYKKLQRGSIVAQCRWRGKVARKELRKLKLAARETGALKEAKDKLEKKVEELTWRIQLEKRLRTDLEEAKAQEIGKLQNSLQELQTKVDETNSLLVKEREAVKKAVEEAPPVIQETQVLVEDTKKIDDLTTEVESLKTSLETEKNRADESEKKCSEVEKSREEQRKKLEDTEKKAHQLQESLTRLEEKLSNLESENQVLRQQALSMAPNKILSGRSRSILQRGAESGHYGGEGRTPMDLHSPSINQRDSEVEDKPQKSLNDKQQENQDLLIRCIAQHLGFAGNRPIAACIIYKCLLQWRSFEVERTSVFDKIIQTIGHAIESQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATIFGRMTQSFRGAPQGVNLSLINGGTSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFIQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNHAISNSFLLDDDSSIPFSVDDLSKSMEQIDIGDIEPPPLIRENSGFSFLLPRTD* 1973
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 16631061 16648214 - Chy5G102680.1 Chy05g01222 227449
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01222 1972 Gene3D - 1110 1173 - -
Chy05g01222 1972 ProSiteProfiles Dilute domain profile. 1602 1915 IPR002710 -
Chy05g01222 1972 ProSiteProfiles IQ motif profile. 1201 1230 IPR000048 GO:0005515
Chy05g01222 1972 SMART MYSc_2a 500 1176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 Pfam F-box domain 52 87 IPR001810 GO:0005515
Chy05g01222 1972 PANTHER MYOSIN 448 1969 - -
Chy05g01222 1972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1326 IPR027417 -
Chy05g01222 1972 SMART DIL_2 1790 1897 IPR002710 -
Chy05g01222 1972 Gene3D - 1228 1275 - -
Chy05g01222 1972 Gene3D - 1276 1325 - -
Chy05g01222 1972 Gene3D - 1176 1227 - -
Chy05g01222 1972 PANTHER MYOSIN-9 448 1969 - -
Chy05g01222 1972 Coils Coil 1418 1494 - -
Chy05g01222 1972 MobiDBLite consensus disorder prediction 1 21 - -
Chy05g01222 1972 Gene3D Myosin VI head, motor domain, U50 subdomain 755 1044 - -
Chy05g01222 1972 MobiDBLite consensus disorder prediction 1537 1553 - -
Chy05g01222 1972 ProSiteProfiles IQ motif profile. 1297 1326 IPR000048 GO:0005515
Chy05g01222 1972 Pfam DIL domain 1791 1894 IPR002710 -
Chy05g01222 1972 ProSiteProfiles IQ motif profile. 1226 1253 IPR000048 GO:0005515
Chy05g01222 1972 ProSiteProfiles IQ motif profile. 1178 1205 IPR000048 GO:0005515
Chy05g01222 1972 Gene3D - 882 1066 - -
Chy05g01222 1972 Pfam Myosin head (motor domain) 507 1163 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 CDD MYSc_Myo11 519 1163 IPR036018 -
Chy05g01222 1972 Gene3D Kinesin motor domain 508 1105 IPR036961 -
Chy05g01222 1972 MobiDBLite consensus disorder prediction 1516 1554 - -
Chy05g01222 1972 MobiDBLite consensus disorder prediction 1429 1471 - -
Chy05g01222 1972 PRINTS Myosin heavy chain signature 639 666 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 PRINTS Myosin heavy chain signature 925 953 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 PRINTS Myosin heavy chain signature 872 900 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 PRINTS Myosin heavy chain signature 592 617 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 PRINTS Myosin heavy chain signature 535 554 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 Pfam IQ calmodulin-binding motif 1302 1318 IPR000048 GO:0005515
Chy05g01222 1972 Pfam IQ calmodulin-binding motif 1275 1295 IPR000048 GO:0005515
Chy05g01222 1972 Pfam IQ calmodulin-binding motif 1228 1247 IPR000048 GO:0005515
Chy05g01222 1972 Pfam IQ calmodulin-binding motif 1180 1198 IPR000048 GO:0005515
Chy05g01222 1972 Pfam Myosin N-terminal SH3-like domain 452 494 IPR004009 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 ProSiteProfiles Myosin motor domain profile. 505 1175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy05g01222 1972 SUPERFAMILY F-box domain 52 103 IPR036047 GO:0005515
Chy05g01222 1972 Coils Coil 1359 1393 - -
Chy05g01222 1972 ProSiteProfiles IQ motif profile. 1249 1278 IPR000048 GO:0005515
Chy05g01222 1972 SMART iq_5 1177 1199 IPR000048 GO:0005515
Chy05g01222 1972 SMART iq_5 1225 1247 IPR000048 GO:0005515
Chy05g01222 1972 SMART iq_5 1248 1270 IPR000048 GO:0005515
Chy05g01222 1972 SMART iq_5 1296 1318 IPR000048 GO:0005515
Chy05g01222 1972 SMART iq_5 1273 1295 IPR000048 GO:0005515
Chy05g01222 1972 SMART iq_5 1200 1222 IPR000048 GO:0005515
Chy05g01222 1972 SMART fbox_2 50 90 IPR001810 GO:0005515
Chy05g01222 1972 CDD MyosinXI_CBD 1553 1938 IPR037975 GO:0007015
Chy05g01222 1972 Coils Coil 1320 1354 - -
Chy05g01222 1972 Gene3D - 695 753 - -
Chy05g01222 1972 ProSiteProfiles IQ motif profile. 1274 1301 IPR000048 GO:0005515
Chy05g01222 1972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 481 1228 IPR027417 -
Chy05g01222 1972 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 451 500 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01470 Chy-Chr1:20409567 Chy05g01222 Chy-Chr5:16631061 0 dispersed
Chy02g01252 Chy-Chr2:9133332 Chy05g01222 Chy-Chr5:16631061 0 dispersed
Chy03g00654 Chy-Chr3:9086185 Chy05g01222 Chy-Chr5:16631061 0 dispersed
Chy05g01222 Chy-Chr5:16631061 Chy11g01878 Chy-Chr11:24995218 0 dispersed
Chy09g01027 Chy-Chr9:12811101 Chy05g01222 Chy-Chr5:16631061 5.37E-13 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01222 K10357 - csv:101206606 2954.08