Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01223 ATGGCAAACCGGTGGTGGACCTCCGGCCAGATGGGTCTTCCCGGAATTGATCATACTTCGACAAGCTCCTCTGCTATGAGAAAACCAGATCTGGGAATCTCCATGAACGACAACGGTGGTCCTGTTCACAGTGGTGGTGATGACGATGACGATAGGGATAACGGTGGGGATGAACCTAAAGAAGGAGCAGTTGAGGTTCCAACGCGTCGTCCCCGTGGCCGACCGCCGGGATCCAAGAATAAGCCTAAGCCACCTATCTTTGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATTTCTAATGGAGCTGATATTGCCGAGAGCGTTGCTCAATTCGCTCGACGGCGACAGAGAGGTGTTTCTGTGCTTAGTGGTAGCGGTACGGTGACAAATGTCACACTCCGACAACCGTCTGCGCCTGGTGCAGTCTTAGCCCTCCAGGGACGATTCGAGATACTTTCTTTAACTGGAACTTTCCTCCCTGGACCAGCCCCACCTGGCTCAACCGGACTAACGATCTACTTGGCTGGTGGACAAGGGCAAGTGGTGGGTGGCAGCGTCGTCGGGCCACTCACCGCTGCTGGCCCAGTGATGGTGATTGCTGCAACATTTTCCAACGCAACATACGAAAGATTACCCTTAGAAGAGGAAGAAGAAGGCGGCGGAGTAGGAGCACAAGGGCACACATCGGCAGGCGGTGGCGGCGCAGGCGAAGGTTCACCACAAGGCATCGGAGGCGGAGTCGGGGATCCATCAGCTATGACTCCACTGTACAATTTACCACCAAATTTACTACCGAATGGCGGCGGAGGGCAGATGAACCAAGAGGCTTATTCTTGGGCTCACGGTGGCCGGCCGTCATTTTAA 879 54.27 MANRWWTSGQMGLPGIDHTSTSSSAMRKPDLGISMNDNGGPVHSGGDDDDDRDNGGDEPKEGAVEVPTRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAQFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLALQGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGVGAQGHTSAGGGGAGEGSPQGIGGGVGDPSAMTPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPSF* 293
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 16655920 16656975 + Chy5G102690.1 Chy05g01223 227450
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01223 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 210 IPR005175 -
Chy05g01223 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 291 IPR014476 GO:0003680
Chy05g01223 292 Gene3D - 97 223 - -
Chy05g01223 292 MobiDBLite consensus disorder prediction 43 68 - -
Chy05g01223 292 CDD DUF296 97 180 IPR005175 -
Chy05g01223 292 PIRSF ESCAROLA 10 292 IPR014476 GO:0003680
Chy05g01223 292 ProSiteProfiles PPC domain profile profile. 93 231 IPR005175 -
Chy05g01223 292 MobiDBLite consensus disorder prediction 13 29 - -
Chy05g01223 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 7 291 - -
Chy05g01223 292 MobiDBLite consensus disorder prediction 1 93 - -
Chy05g01223 292 MobiDBLite consensus disorder prediction 219 292 - -
Chy05g01223 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 221 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01223 Chy-Chr5:16655920 Chy10g00525 Chy-Chr10:11822713 7.79E-79 dispersed
Chy05g01223 Chy-Chr5:16655920 Chy06g00491 Chy-Chr6:3305545 1.49E-87 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01223 - - csv:101220902 468.388