Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy05g01226 | ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCATCAACACCACCATCAAACTCCCACCACCACATCGCCGACCAATGGCCTTCTTCCACCTACCCACCACCTCTCCGCCGCCGCTGCCTCCTCCGACGCCGGTCCTCATGTTGTATACCCTCACTCCGTCCCTTCCGCCGCCGTCTCTTCTTCTCCTCTTGAGCCCGCACGTCGGAAGAGAGGTCGGCCGAGGAAGTACGGAACGCCGGAGGAAGCTTTAGCGGCTAAGAAAGCTGCTACGGCCTCGTCTCACTCTTCGTCTTCTAAGGCTAAGAAGGAACTCGCTTCTTCTTCTTCTCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCAACGCCTTCTAAGAAATCTCAGTTGGCTGCACTTGGTAATGCAGGCCAAGGTTTTGCGCCACATGTTATTAATGTTGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGCAGTTTATGCAACAATGTAAGCGGGAAATTTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCGCATCAGGAGGCAATATTGCATATGAGGGACGTTTTGAGATTGTTTCATTATGCGGATCTTATGTACGAACTGACCTTGGAGGAAAGACTGGTGGTCTTAGTGTATGTCTATCAAGTGCTGAAGGGCATATCATAGGAGGGGGAGTTGGTGGACCATTGAAGGCCGCTGGACCCGTGCAGGTTATTGTTGGAACCTTTGTAATCGACCCAAAGAAAGAATTTGGTCGTGGTAAAGGTGATGGATCTGCTGGCAAGTTGCCCTCACCTATTGGTGGGACATCGATGTCAAATCTACGCTATGGCTCCAACATTGACTCTGGAGGTAATCAAATAAGGGGAAATGATGAACATCAAGGTCTTGGGGAGAGTCATTTTTTGCTTCAGCCACGGGGAGTGAATCTGACATCACCACGATCAACGGATTGGAGGACGGGTCTGGATGCCACAAACACTGCTTATGATTTGTCAGGAAGAACAGGCCATCATTCTCCTGAAAACGGAGATTACGATCAGATTCCTGATTGA | 1089 | 49.77 | MEPNENQLSSYFHHHQHHHQTPTTTSPTNGLLPPTHHLSAAAASSDAGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASSSFSTPSKKSQLAALGNAGQGFAPHVINVAAGEDVGQKIMQFMQQCKREICILSASGSISNASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGGKTGGLSVCLSSAEGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEFGRGKGDGSAGKLPSPIGGTSMSNLRYGSNIDSGGNQIRGNDEHQGLGESHFLLQPRGVNLTSPRSTDWRTGLDATNTAYDLSGRTGHHSPENGDYDQIPD* | 363 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 16689179 | 16694729 | - | Chy5G102720.1 | Chy05g01226 | 227453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy05g01226 | 362 | CDD | DUF296 | 144 | 254 | IPR005175 | - | |
Chy05g01226 | 362 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 1 | 353 | IPR039605 | GO:0003680 | |
Chy05g01226 | 362 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 141 | 255 | - | - | |
Chy05g01226 | 362 | MobiDBLite | consensus disorder prediction | 264 | 305 | - | - | |
Chy05g01226 | 362 | MobiDBLite | consensus disorder prediction | 1 | 106 | - | - | |
Chy05g01226 | 362 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 144 | 255 | IPR005175 | - | |
Chy05g01226 | 362 | MobiDBLite | consensus disorder prediction | 340 | 362 | - | - | |
Chy05g01226 | 362 | ProSiteProfiles | PPC domain profile profile. | 138 | 276 | IPR005175 | - | |
Chy05g01226 | 362 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 | 1 | 353 | - | - | |
Chy05g01226 | 362 | MobiDBLite | consensus disorder prediction | 277 | 301 | - | - | |
Chy05g01226 | 362 | Gene3D | - | 144 | 265 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g01226 | Chy-Chr5:16689179 | Chy03g01005 | Chy-Chr3:13564868 | 1.36E-48 | dispersed | |
Chy05g01226 | Chy-Chr5:16689179 | Chy06g00871 | Chy-Chr6:6294210 | 4.00E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy05g01226 | - | - | csv:101221844 | 582.022 |