Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01239 ATGGCGGGTAATGGGGTTTTTGCAGACATTTTCGACGGTGAAGTCTACAAATACTATTCAGAAGGTGAATGGAAGAAATCCTCCTCAGGGAAATCTGTTGCCATCATCAACCCCACTACTAGGAAGACCCAGTACAGAGTTCAAGCTTGTAACCAAGAGGAGGTTAATAAAGTGATGGAAATAGCCAAATCTGCTCAGAAATTATGGGCAAAGACTCCATTGTGGAAGAGAGCAGAGCTTCTTCATAAAGCTGCTGCAATTTTGAAAGAACACAAAGCTCCAATTGCTGAGTGTTTGGTGAAGGAAATTGCTAAACCAGCCAAAGATGCAGTCACTGAGGTTGTGAGGTCGGGGGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGATTTTGGGTGAAGGGAAGTTCTTGGTTTCTGATAGTTTCCCTGGAAATGAAAGGACCAAATATTGCCTTACTTCCAAGATCCCTCTTGGTGTGATTTTAGCCATTCCTCCATTCAACTATCCTGTCAATCTGGCTGTTTCAAAAATTGCCCCGGCTTTAATTGCTGGAAATTCTATTGTACTCAAGCCTCCAACTCAGGGCGCTGTTTCTGCTCTCCACATGGTACATTGCTTCCATCTAGCTGGTTTTCCTAAAGGCCTTATTAGTTGTGTCACGGGAAAAGGTTCCGAGATTGGTGATTTCCTCACAATGCATCCGGGTGTCGACTGTATAAGCTTTACTGGTGGGGATACCGGTGTTGCAATTTCAAAGAAGGCAGGCATGATACCTCTTCAGATGGAACTGGGGGGCAAAGACGCCTGCATTGTGCTCGAGGATGCAGATCTTGATTTAGTTGCCGCTAACATCATAAAGGGAGGCTTTTCTTACAGTGGCCAAAGGTGTACTGCCGTCAAGGTTGTTTTGGTAATGGAATCTGTCGCAGATGCTTTAGTCGAGAAAGTAAAGGCACGAGTGGCTAAATTAACTGTTGGTGCTCCTGAAGACGACTCAGACATTACTCCAGTTGTGACTGAGTCATCGGCAAACTTCATTGAAGGACTGGTTATGGATGCAAAGGAAAAGGGTGCAACATTTTGCCAAGAGTACAAAAGAGAGGGCAACCTAATTTGGCCCTTGTTATTAGATAATGTTAGGCCTGATATGAGGATTGCTTGGGAGGAACCTTTTGGCCCAGTTTTGCCAGTCATTAGGATCAATTCTGTTGAAGAAGGAATCCACCATTGTAATGCTAGCAATTTTGGACTTCAGGGATGTGTCTTCACGAAGGACATCAACAAGGCGATATTGATAAGCGACGCAATGGAAACCGGAACAGTTCAAATCAACTCAGCACCTGCTCGAGGACCCGATCATTTCCCATTCCAGGGAATCAAGGACAGTGGAATTGGTTCCCAAGGTGTTACTAACAGCATCAACATGATGACCAAAGTGAAGACCACAGTTATCAACTTGCCTACACCGTCCTACACCATGGGTTAG 1491 44.6 MAGNGVFADIFDGEVYKYYSEGEWKKSSSGKSVAIINPTTRKTQYRVQACNQEEVNKVMEIAKSAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVDCISFTGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVKARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTTVINLPTPSYTMG* 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16782046 16785345 - Chy5G102850.1 Chy05g01239 227466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01239 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Chy05g01239 496 CDD ALDH_F11_NP-GAPDH 15 487 - -
Chy05g01239 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 457 IPR016163 GO:0016620
Chy05g01239 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 483 IPR016162 GO:0016491
Chy05g01239 496 PANTHER ALDEHYDE DEHYDROGENASE 1 496 - -
Chy05g01239 496 SUPERFAMILY ALDH-like 15 487 IPR016161 GO:0016491
Chy05g01239 496 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 496 - -
Chy05g01239 496 Pfam Aldehyde dehydrogenase family 24 483 IPR015590 GO:0016491
Chy05g01239 496 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01239 Chy-Chr5:16782046 Chy11g01046 Chy-Chr11:14923094 1.83E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01239 K00131 - csv:101208699 971.074