Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01330 ATGGCCGGAAGTATAGGAAGAGACGAGTGGTCGGACTACGACAGCAGTTGCTCCTCCTCCATAACCGTCCCAGACTCAACCCGTAGCTGGATGAGCAACCTCAGTTTCGGGAGTAGGCGTCGCAGCAGCAGCTCAGCCGCAGACGGGGGTGGGCTTGAGAACATTACAAGCGGTACGATGATGGTGAAGCCACACAAGGCAAATGAAGTGGGGTGGGAGGCGATGCGGTGGCTACGGCGAGCGAAAGGGGAAGTGGGGTTAGAGGATTTCCGGCTAATACGGCGGGTGGGGAGCGGAGATATTGGGAATGTATATTTATGTGAGATAAGGAATCCAATGGTGGGATTACCAAAGTGGTTTTACGCCATGAAAGTGGTTGATAGAGAAGCTGTTTGTGTAAGGAATAAAGAGAGAAGGGCAGATATGGAAAAGGAAATATTGAAATTGCTAGATCACCCTTTTTTGCCAACTCTTTATGCTCATTTTGAAGCTTCTCATTATTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTGCCAGGTTACGTCTTCCCAATAAACGCTTCTCCATTCCTTCTGCTAAGTTTTATGCGGCCGAGATAATTTTAGCTCTTGAGTATCTACACATGATGGGCATAATTTATAGAGATTTAAAACCGGAAAACGTTTTAGTTAGAGAAGACGGCCATATTATGCTCTCCGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAAGCTCCTCCGTTCCCGTACCACCGCTTCCGACCGCCACGTCAGATCCTCCTCCTACAGCTTCTCCACTTCCTCCTCCTCCTGCGCTGCCGCACCCATCCAACCCGTCCTCTCTTGTTTCTCCCTCTCCCGTCGCCAAAAATCCACCACCGTCACCACCATCACCGAACACGCCTCCGACTCCATCTACGGCGGCGAGGAATTTGACCCAGAACCAGAATTAATAGCGGAACCGATAAATGCCCGGTCGAAGTCGTTCGTGGGAACCCACGAGTATTTGGCGCCGGAGGTGATTTCCGGGCAGGGACACGGCAGCGGAGTGGATTGGTGGACGTTGGGGATATTCTTATACGAAATGTTGTATGGGAAAACGCCGTTTAAAGGGGAAAACAATGAGAAGACGTTGATGAATATATTGAAGCAGCCATTGAAATTTCCAAGAATTGGGATTAGTAGCAGCAAAGAATATGAAGAAATGGTGAAAGTTGAGGATTTAATTAAGAAACTTTTGGTGAAAAATCCAAAAAAAAGAATTGGGAGTTTAAAAGGATCAGTTGAGATTAAAAGACATGAATTTTTCAAAGGAATTAATTGGGCTTTAATTAGATCCGTACGACCTCCACAAATCCCCAACAACAATATTATTAACAACCTTAATTACTCTAAATACCCTTCTAATTATTTACCCAAATTAAGTAAGAAACAAAGACAACAACCTTACCAAATCCCTAATCACCATTTTGATTATTTCTAA 1500 45.4 MAGSIGRDEWSDYDSSCSSSITVPDSTRSWMSNLSFGSRRRSSSSAADGGGLENITSGTMMVKPHKANEVGWEAMRWLRRAKGEVGLEDFRLIRRVGSGDIGNVYLCEIRNPMVGLPKWFYAMKVVDREAVCVRNKERRADMEKEILKLLDHPFLPTLYAHFEASHYSCLVMEFCPGGDLYAARLRLPNKRFSIPSAKFYAAEIILALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLLRSRTTASDRHVRSSSYSFSTSSSSCAAAPIQPVLSCFSLSRRQKSTTVTTITEHASDSIYGGEEFDPEPELIAEPINARSKSFVGTHEYLAPEVISGQGHGSGVDWWTLGIFLYEMLYGKTPFKGENNEKTLMNILKQPLKFPRIGISSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSVRPPQIPNNNIINNLNYSKYPSNYLPKLSKKQRQQPYQIPNHHFDYF* 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17433069 17435409 + Chy5G103760.1 Chy05g01330 227557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01330 499 PANTHER PROTEIN KINASE PINOID 2 7 499 - -
Chy05g01330 499 Gene3D Phosphorylase Kinase; domain 1 87 178 - -
Chy05g01330 499 MobiDBLite consensus disorder prediction 38 60 - -
Chy05g01330 499 ProSiteProfiles Protein kinase domain profile. 90 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01330 499 Pfam Protein kinase domain 332 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01330 499 Pfam Protein kinase domain 91 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01330 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Chy05g01330 499 Gene3D Transferase(Phosphotransferase) domain 1 330 460 - -
Chy05g01330 499 ProSiteProfiles AGC-kinase C-terminal domain profile. 443 499 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy05g01330 499 SUPERFAMILY Protein kinase-like (PK-like) 70 474 IPR011009 -
Chy05g01330 499 MobiDBLite consensus disorder prediction 1 23 - -
Chy05g01330 499 PANTHER FLIPPASE KINASE 1-RELATED 7 499 - -
Chy05g01330 499 Gene3D Transferase(Phosphotransferase) domain 1 179 246 - -
Chy05g01330 499 SMART serkin_6 90 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01330 499 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01330 Chy-Chr5:17433069 Chy12g00620 Chy-Chr12:8912134 1.69E-144 dispersed
Chy05g01330 Chy-Chr5:17433069 Chy08g00920 Chy-Chr8:16632692 2.21E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71285 PF00069 Pkinase 7.50E-31 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01330 K08286 - csv:101202905 954.896