Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01336 ATGGTGGTCGGTTGGATTTTTTGTTGGTTTTTGTTCGTGCTGGTTCTAAGGGCGGTGGTGGTTCTCTGGTGGCGGCCCAGAAGAATAGAACAGCATTTCTTTCGTCAAGGAATTCGTGGCCCTCCCTATCGTTTCTTCATTGGAAATGTTAAGGAACTCGTCGGCATGATGATTAAAGCTTCTTCCGATCATTCTTTTCCTAATTCTTCTCATAATATTCTCCCTCGTGTTCTTCCTTTTTATCATCATTGGAAGAAAATTTATGGGTCAAAATTTCTAGTGTGGTTTGGACCGACGGTTAGATTGGCGGTGTCTGATCCAGATTTGATAAGAGAAATATTCACATCGAAATCAGAATTTTGTGAGAAAAATGAACCACACCCACTTGTTAAACAGCTAGAAGGTGATGGACTTCTTAGCCTCAAAGGCCAAAAATGGGCGCTTCATCGAAAGATCATCTCTCCTTCCTTTCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTTGTGGACATGTTGGAGAAATGGTCAGCATTAATGGCGTCAGCAGATTCCGATGAGGTGGAAATTGAAGTATCCGAATGGTTCCAAACCCTAACCGAAGATGTCATCACTAGAACAGCATTTGGCTCAAGCTATGAAGATGGAAAAGCCATTTTCCGGTTACAAGCCCAACAAATGGTCCTTGCTTCTCAAGCCTTTGAAAAAGTTTTCATCCCCGGCTACCGATTCTTACCTACGAGAACGAACGTGAATTCGTGGAGATTGGATAAAGAAATAAGGAAATCGTTGATGAAATTGATCGACCGACGACGAGAGAATTCGATTGAGACGAGCTCAAAGGATTTACTAGGGTTAATGATTAGGGCATCAAAGTCATCTCCATCATCAACAATCACTGTTAATGACATTGTTGAAGAGTGCAAAGGGTTTTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGATGAAGTACTAAGGGAGTGTGGAGCACGTGACATACCCTCCAAAGATGATGTTACAAAGCTCAAAATGTTGAGTATGATCATCAACGAATCGTTACGGTTATATCCGCCGACAGTGGCAACTATTCGACAAGCGAAAGTTGATGTGGAGCTTGGTGGTTACATGCTTCCACGTGGCACTGAGTTGTTGATACCGATTTTGGCAGTTCACCATGATCAAACGATATGGGGGAATGATGTGAATGAGTTCAATCCAGCGCGATTTGCTGAAGGTGTTGCAAAGGCAGCCAATCATCGAGTCGGGTTCATTCCGTTCGGGTTAGGAGCTCGAACCTGTATTGGCCAAAACTTAGCTATATTGCAAGCTAAGTTGGCTCTTGCACTCATACTCCAAAGATTCTCTTTTCGATTGGGACCCTCTTATCAACACTCACCAGCAGTTCAAATGTTACTTTATCCACGACATGGTGCACCTATTATCTTCAAGAAATTATCCACTCCGTTAGTTCATCAAGATCAACAGTCATGA 1563 42.99 MVVGWIFCWFLFVLVLRAVVVLWWRPRRIEQHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDHSFPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVDMLEKWSALMASADSDEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDKEIRKSLMKLIDRRRENSIETSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVQARDEVLRECGARDIPSKDDVTKLKMLSMIINESLRLYPPTVATIRQAKVDVELGGYMLPRGTELLIPILAVHHDQTIWGNDVNEFNPARFAEGVAKAANHRVGFIPFGLGARTCIGQNLAILQAKLALALILQRFSFRLGPSYQHSPAVQMLLYPRHGAPIIFKKLSTPLVHQDQQS* 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17483442 17486121 - Chy5G103820.1 Chy05g01336 227563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01336 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 SUPERFAMILY Cytochrome P450 72 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Chy05g01336 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 504 - -
Chy05g01336 520 Pfam Cytochrome P450 80 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy05g01336 520 PANTHER CYTOCHROMEA2 6 504 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01966 Chy05g01336 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00528 Chy-Chr4:5255009 Chy05g01336 Chy-Chr5:17483442 4.84E-145 dispersed
Chy04g00529 Chy-Chr4:5281153 Chy05g01336 Chy-Chr5:17483442 2.34E-150 dispersed
Chy05g01336 Chy-Chr5:17483442 Chy07g00477 Chy-Chr7:3804152 1.24E-131 dispersed
Chy02g01141 Chy-Chr2:8080039 Chy05g01336 Chy-Chr5:17483442 3.73E-139 transposed
Chy02g01262 Chy-Chr2:9217345 Chy05g01336 Chy-Chr5:17483442 1.91E-137 transposed
Chy04g01546 Chy-Chr4:22097947 Chy05g01336 Chy-Chr5:17483442 4.73E-128 transposed
Chy05g00574 Chy-Chr5:6476778 Chy05g01336 Chy-Chr5:17483442 2.84E-105 transposed
Chy05g00632 Chy-Chr5:7795881 Chy05g01336 Chy-Chr5:17483442 1.82E-105 transposed
Chy06g01378 Chy-Chr6:14138848 Chy05g01336 Chy-Chr5:17483442 7.27E-110 transposed
Chy07g00251 Chy-Chr7:1984094 Chy05g01336 Chy-Chr5:17483442 1.86E-31 transposed
Chy08g00890 Chy-Chr8:16316270 Chy05g01336 Chy-Chr5:17483442 1.03E-36 transposed
Chy09g00128 Chy-Chr9:1042262 Chy05g01336 Chy-Chr5:17483442 1.63E-110 transposed
Chy10g00708 Chy-Chr10:13419370 Chy05g01336 Chy-Chr5:17483442 1.14E-15 transposed
Chy02g01966 Chy-Chr2:23410514 Chy05g01336 Chy-Chr5:17483442 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01336 K15639 - csv:101208789 1014.99