Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy05g01360 | ATGAAGAGCGATACCCATTTCAACATTCATCTTTTCTTACATTTTTTCTTCTTCTTTGGCACTTTTCTTTTGTGCCTTTCTTCTTCTTCTTCTGCACTTGAAGAGTTTCGTCAAGCTTCTAGCCATGGAGGACGTGGTCTGACTGATGCTGAAGCTCATTACATCCGTCAACGGCAACTCCTTTACTACAGAGATGAATTTGGTGACCGTGGTGAAGAAGTCGTCGTCGATCGTAAACTTGTTTTTGAAAACGACAGAATTAGAAATGCTTACATAGCATTACAAGCTTGGAAGCAAGCGATTCTGTCTGACCCTTTAAATCTTACTAAGAATTGGGTTGGATCTGATGTTTGTCACTACAAAGGGGTTTTCTGCGCTCCGGCGCCGGATAATTCGTTGATCCGTACAGTCGCCGGAATTGACCTTAACCACGGCGACATTGCCGGGTACTTGCCGGAGGAGCTTGGTCTTCTTGTGGATCTTGCATTGTTTCATATAAACTCCAATCGGTTCTGTGGGACTGTTCCTCACAAGTTCAAGAACTTGAAGTTGTTGTTCGAGTTGGATCTGAGTAATAATCGCTTCGCCGGGAAGTTCCCTCGGGTGGTTCTTGAGTTGCCGGAGCTGAAGTTTTTGGATCTGAGGTTCAACGAGTTCGAAGGGACGGTTCCTAAGGAGCTTTTTGACAAGGATTTGGACGCCATTTTCATCAACCACAATAGATTCCGGTTTGACTTGCCGGAAAATTTCGGTAACTCGCCGGTTTCGGTTATTGTTCTTGCTAATAACAAATTTCATGGGTGTGTGCCGGGGAGCATTGGGAATATGACGAGATTGAATGAGATTATTCTTATGAATAATGGCTTTCGATCGTGTTTGCCGTCGGAGATTGGGTTTCTGAAAAATTTGACGGTGTTTGATGTGAGTAACAATGAGTTTTTTGGGAAGTTGCCGGAGACGATCGGTGGAATGGTGAGTTTGGAGCAGCTGAATGTTGCGCATAATTTCTTGTCTGGGAAGATTCCGGACAGTATTTGTAAATTGCCGAATCTGCAGAACTTTACTTACTCTTATAATTTCTTTACGGGAGAAGCACCGTCGTGCTTGGCGTTGCCGGACTTTGATGATCGGAGGAACTGTATACCAGAACGACCGGTTCAACGCTCTGAGAGGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGCAGTTCTTTTGGATGTCCTTCTTTTGTTGCTCCGTCGCCACCTGTGGTGGTGCCATCGCCGCCACCTGTGGTGGTCCCTTCTCCGCCACCTGTTGTTGTACCAACACCATCGCCACCTGTTTACCCTCCACCGCCACCAAAATCCGAGTCACATCCCATTTACCGACCCCTCCCTCCGCCGCCGCCTCCACCACCATCCCCATCTCCCCCTCCCCCGCCTGTTTACTCCCCCCCTCCACCTCCACCATCCCCACCTCCACCGTCCCCACCTCCACCGTCCCCACCACCGCCAGTTTACTCTCCACCCCCACCTCCACCATCTCCTCCACCGCCTTCTCCACCACCACCATCACCCCCACCGCCGCCCCCACCAGTTTACTCTCCACCCCCACCTCCACCTTCACCGCCCCCGCCATCTCCACCACCTCCACCCTCTCCTCCCCCGCCATCTCCTCCCCCACCATCGCCGCCGCCACCGGCACCGGTGTATTGCGTCCGACCATCACCCCCACCTCCACCACCAAACTCTCCCCCACCTCCTCCTCCCTTGTTCTCTCCACCCCCACCTGTTTACTACTACAATTCACCGCCACCTCCCAACTCTCCACCACCCCCACCAATGTACTCACCTCCACCACCGCCGCACTCGCCGCCTCCTCCTCCACATTCACCTCCACCACCAATCTATCCTTACTTATCTCCCCCACCTCCTCCACCTGTCTATTCTCCACCTCCCCCTCCACCGGTCTATTCACCGCCTCCCCCACCGCCGTGTATAGAACCACCCCCACCTCCTCCTCCGCCGTGTATAGAACATCATGAACCCCCACCCCCACCATCACTCTCCCCACCTCCGCCCATCCAATACCTTCCTCCGCCGTCTCCTTCACTACCTCCACCCCCAGTTTACTATTCACCTCCTCCGCCAGTCTATTACTCTCCACCACCACCACCATCAGCATCGCCGCCTCCGCCACCTGTATCCCCACCACCATCACCTGTATACGAAGGCCCATTGCCACCAATCTATGGAGTTTCGTACGCTTCCCCTCCACCTCCACCCTTCTATTGA | 2280 | 52.63 | MKSDTHFNIHLFLHFFFFFGTFLLCLSSSSSALEEFRQASSHGGRGLTDAEAHYIRQRQLLYYRDEFGDRGEEVVVDRKLVFENDRIRNAYIALQAWKQAILSDPLNLTKNWVGSDVCHYKGVFCAPAPDNSLIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFKNLKLLFELDLSNNRFAGKFPRVVLELPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFDLPENFGNSPVSVIVLANNKFHGCVPGSIGNMTRLNEIILMNNGFRSCLPSEIGFLKNLTVFDVSNNEFFGKLPETIGGMVSLEQLNVAHNFLSGKIPDSICKLPNLQNFTYSYNFFTGEAPSCLALPDFDDRRNCIPERPVQRSERQCKSFLSKPVDCSSFGCPSFVAPSPPVVVPSPPPVVVPSPPPVVVPTPSPPVYPPPPPKSESHPIYRPLPPPPPPPPSPSPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPPSPPPPSPPPPSPPPPAPVYCVRPSPPPPPPNSPPPPPPLFSPPPPVYYYNSPPPPNSPPPPPMYSPPPPPHSPPPPPHSPPPPIYPYLSPPPPPPVYSPPPPPPVYSPPPPPPCIEPPPPPPPPCIEHHEPPPPPSLSPPPPIQYLPPPSPSLPPPPVYYSPPPPVYYSPPPPPSASPPPPPVSPPPSPVYEGPLPPIYGVSYASPPPPPFY* | 760 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 17717964 | 17720243 | - | Chy5G104060.1 | Chy05g01360 | 227587 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy05g01360 | 759 | MobiDBLite | consensus disorder prediction | 602 | 625 | - | - | |
Chy05g01360 | 759 | PRINTS | Proline rich extensin signature | 469 | 485 | - | - | |
Chy05g01360 | 759 | PRINTS | Proline rich extensin signature | 430 | 442 | - | - | |
Chy05g01360 | 759 | PRINTS | Proline rich extensin signature | 443 | 464 | - | - | |
Chy05g01360 | 759 | PRINTS | Proline rich extensin signature | 409 | 425 | - | - | |
Chy05g01360 | 759 | Pfam | Leucine Rich Repeat | 326 | 348 | IPR001611 | GO:0005515 | |
Chy05g01360 | 759 | MobiDBLite | consensus disorder prediction | 668 | 696 | - | - | |
Chy05g01360 | 759 | MobiDBLite | consensus disorder prediction | 443 | 583 | - | - | |
Chy05g01360 | 759 | SUPERFAMILY | L domain-like | 91 | 371 | - | - | |
Chy05g01360 | 759 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 | 13 | 450 | - | - | |
Chy05g01360 | 759 | Gene3D | Ribonuclease Inhibitor | 253 | 394 | IPR032675 | - | |
Chy05g01360 | 759 | Pfam | Leucine rich repeat | 163 | 218 | IPR001611 | GO:0005515 | |
Chy05g01360 | 759 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 13 | 450 | - | - | |
Chy05g01360 | 759 | Pfam | Leucine rich repeat N-terminal domain | 93 | 125 | IPR013210 | - | |
Chy05g01360 | 759 | Gene3D | Ribonuclease Inhibitor | 91 | 252 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01907 | Chy-Chr2:22139730 | Chy05g01360 | Chy-Chr5:17717964 | 0 | dispersed | |
Chy05g01360 | Chy-Chr5:17717964 | Chy06g00552 | Chy-Chr6:3765008 | 3.82E-153 | dispersed | |
Chy05g01360 | Chy-Chr5:17717964 | Chy02g01174 | Chy-Chr2:8415487 | 4.98E-96 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy05g01360 | - | - | csv:101210261 | 791.956 |