Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01369 ATGTCAACACCTACTCCGGCGCCCACGTCTCCGCCGGCGACCAATACGACATCCCCACCGCCACCAACCCCTACTGCTCCGCCCCCATCAACTCCAGCACAACCGCCGCCGTCTACTACACCGCCACCAACTACCACTCCGTCGCCACCTCCGCCTACCGCTGCATCGCCGCCAGCTCCTTCGCAGCCTCCGCCAACTTCCGCGCCACCTCCTGCCACCCCATCACGGCCTTCGCCGTCTACTCCAGAGCCCGCCCCGCCCACTGCAACTCCCTCACCACCGGCTTCCACTCCTCCGCCGTCCAGACCTTCGAGTTCTCCACCTCCTCCGTCTTCTACTACCTCTCCGTCTCCCCCAACTGGCCGTAGTCCGCCGCCTCCGACTTCTCATACGCCGTCTACTCCGTCCAGAACTCCTCCTCCTCCTCCCTCAACGCCGTCCTCCTCCTCGTCTAATATATCAACCGGACTTGTCGTCGGAATAGCAATTGGTGGAGTGGTAATTGTTCTTCTGCTGAGTATATTATGCCTTTGTTGTACAAAGAAAAGAAGAAGACGACGCGATGAAGAGGGATTTTATCCACACCCTCCGCATGACCCTAAAGTTGACCCTTATGCTGGTCAGCAGCAATGGCAGAACAATGCTCCTCTACCGCCTGATCCTTTAGTTGGGATGGTGCCAAAGCCATCTCCTCCACCGGTAGTTGCATCCCGACCCCCGCATTCACCAACCGGCGTTCGTCCTCCACTTCCACCTCCGCTCTATATGAGTAGCAGTGGAGGTTCGGGCTCTATGTATTCTGGGCCTGAAACGCCGCTCCCTCCGCCGCCTCCCCCTCATATGGCCTATGGTTTCTCAAAGAGTACTTTTACTTACGAGGAATTGGCAATGGCCACGGACGGCTTCTCGGATGCGAATCTCCTTGGACAAGGTGGATTTGGATATGTGCATAGGGGAGTTCTTCCTAATGGTAAGGAAGTTGCTGTCAAGCAGTTGAAAGCTGGGAGTGGGCAGGGCGAACGAGAATTTCAAGCCGAAGTTGATATCATCAGCCGAGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAGTTTGTTGCTAACAACACTTTGGAGTTCCATTTACATGGTAAAGGGCGGCCGACCATGGATTGGCAGACTAGACTTAAAATCGCTTTAGGATCAGCAAAAGGACTAGCTTATATTCATGAGGATTGTCACCCAAAAATCATTCATCGCGACATTAAAGCTGCTAACATATTGTTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTTGCAAAGTTTACCTCTGATGTCAATACCCATGTATCAACTCGAGTGATGGGTACTTTTGGGTATCTTGCTCCAGAGTATGCCTCTAGTGGCAAACTAACTGAAAAATCAGACGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCAGTCGATATGAGTAATACTGCTATGGAAGATAGCCTTGTAGACTGGGCTAGGCCGCTAATGAACCGAGCTTTAGAAGATGGAAACTTCGATGTTTTAGTCGATCCAAGGCTGCAGAACAACTACAACCACAATGAAATGGCTCGCCTGGTTGTCTGTGCTGCTGCTTGTGTTCGTCATTCTGCCAAGCGTCGACCACGAATGAGTCAGGTAGTACGAGCGCTCGAAGGAGACTCTTCGCTATCGGATCTCAACGAAGGAGTGAAACTCGGGCAGAGCTCAATGTACAGTTCTCATGGAAGCACAGACTACGACACCCATCAGTACAACGAGGATTTGAGAAAGTTTAGAAAGATGGCATTGGGAAGCACAGAATATGGAGCGAGCAGCGAGTACAGCGGACCGACAAGCGAGTATGGGCTGTATCCGTCAGGATCAAGCAGCGAAGGGCAAACCACAAGAGAAATGGAGACGAGAACAGCAAAGAAAGAGAGTGGAGGCTTTAGTGGACGCTCTTGA 2019 51.36 MSTPTPAPTSPPATNTTSPPPPTPTAPPPSTPAQPPPSTTPPPTTTPSPPPPTAASPPAPSQPPPTSAPPPATPSRPSPSTPEPAPPTATPSPPASTPPPSRPSSSPPPPSSTTSPSPPTGRSPPPPTSHTPSTPSRTPPPPPSTPSSSSSNISTGLVVGIAIGGVVIVLLLSILCLCCTKKRRRRRDEEGFYPHPPHDPKVDPYAGQQQWQNNAPLPPDPLVGMVPKPSPPPVVASRPPHSPTGVRPPLPPPLYMSSSGGSGSMYSGPETPLPPPPPPHMAYGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVANNTLEFHLHGKGRPTMDWQTRLKIALGSAKGLAYIHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMSNTAMEDSLVDWARPLMNRALEDGNFDVLVDPRLQNNYNHNEMARLVVCAAACVRHSAKRRPRMSQVVRALEGDSSLSDLNEGVKLGQSSMYSSHGSTDYDTHQYNEDLRKFRKMALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMETRTAKKESGGFSGRS* 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17799292 17802480 + Chy5G104150.1 Chy05g01369 227596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01369 672 SMART serkin_6 302 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01369 672 MobiDBLite consensus disorder prediction 220 255 - -
Chy05g01369 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 70 658 - -
Chy05g01369 672 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 70 658 - -
Chy05g01369 672 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Chy05g01369 672 Gene3D Phosphorylase Kinase; domain 1 280 377 - -
Chy05g01369 672 SUPERFAMILY Protein kinase-like (PK-like) 277 575 IPR011009 -
Chy05g01369 672 Gene3D Transferase(Phosphotransferase) domain 1 378 589 - -
Chy05g01369 672 MobiDBLite consensus disorder prediction 626 654 - -
Chy05g01369 672 PRINTS Proline rich extensin signature 4 20 - -
Chy05g01369 672 PRINTS Proline rich extensin signature 24 41 - -
Chy05g01369 672 PRINTS Proline rich extensin signature 43 68 - -
Chy05g01369 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Chy05g01369 672 MobiDBLite consensus disorder prediction 185 276 - -
Chy05g01369 672 MobiDBLite consensus disorder prediction 625 672 - -
Chy05g01369 672 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Chy05g01369 672 MobiDBLite consensus disorder prediction 1 152 - -
Chy05g01369 672 MobiDBLite consensus disorder prediction 1 147 - -
Chy05g01369 672 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01869 Chy05g01369 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00545 Chy-Chr4:5499304 Chy05g01369 Chy-Chr5:17799292 1.93E-78 dispersed
Chy04g00641 Chy-Chr4:7348350 Chy05g01369 Chy-Chr5:17799292 1.72E-99 dispersed
Chy05g01369 Chy-Chr5:17799292 Chy07g01290 Chy-Chr7:17560875 0 dispersed
Chy11g01610 Chy-Chr11:22647691 Chy05g01369 Chy-Chr5:17799292 7.60E-93 dispersed
Chy01g00448 Chy-Chr1:3209329 Chy05g01369 Chy-Chr5:17799292 5.26E-73 transposed
Chy02g02190 Chy-Chr2:26072814 Chy05g01369 Chy-Chr5:17799292 3.71E-69 transposed
Chy02g02235 Chy-Chr2:26420623 Chy05g01369 Chy-Chr5:17799292 2.33E-77 transposed
Chy03g00749 Chy-Chr3:10012602 Chy05g01369 Chy-Chr5:17799292 2.94E-79 transposed
Chy04g00949 Chy-Chr4:13695507 Chy05g01369 Chy-Chr5:17799292 1.57E-63 transposed
Chy04g01231 Chy-Chr4:18839147 Chy05g01369 Chy-Chr5:17799292 2.46E-58 transposed
Chy05g00003 Chy-Chr5:31112 Chy05g01369 Chy-Chr5:17799292 4.36E-75 transposed
Chy05g00198 Chy-Chr5:1636607 Chy05g01369 Chy-Chr5:17799292 1.13E-31 transposed
Chy05g00917 Chy-Chr5:13712267 Chy05g01369 Chy-Chr5:17799292 8.22E-77 transposed
Chy05g01150 Chy-Chr5:15966648 Chy05g01369 Chy-Chr5:17799292 7.71E-74 transposed
Chy06g01078 Chy-Chr6:8908168 Chy05g01369 Chy-Chr5:17799292 1.23E-71 transposed
Chy07g01446 Chy-Chr7:18912106 Chy05g01369 Chy-Chr5:17799292 7.38E-70 transposed
Chy11g00026 Chy-Chr11:363731 Chy05g01369 Chy-Chr5:17799292 1.78E-80 transposed
Chy11g00254 Chy-Chr11:2389548 Chy05g01369 Chy-Chr5:17799292 2.03E-74 transposed
Chy11g01778 Chy-Chr11:24144464 Chy05g01369 Chy-Chr5:17799292 1.63E-30 transposed
Chy12g01128 Chy-Chr12:16253161 Chy05g01369 Chy-Chr5:17799292 4.90E-61 transposed
Chy02g01869 Chy-Chr2:21220644 Chy05g01369 Chy-Chr5:17799292 0 wgd
Chy04g00919 Chy-Chr4:13055727 Chy05g01369 Chy-Chr5:17799292 6.70E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71287 PF07714 PK_Tyr_Ser-Thr 3.40E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01369 - - csv:101208385 927.161