Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy05g01377 | ATGGAACCTTCATCGGCCAAGAGCTGGAGCATCCACTCTCGGCCAGATATCATCCACAAGTACGGGATCCTCGAGCGCGTCGGATCCGGCGCTTATTCCGATGTCTACCGTGCACGGCGGCTCTCCGATGGAGTCATCGTTGCCTTGAAGGAGATCCACGATTATCAGTCGGCGTTCCGCGAAATCGAGGCTCTTCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTTTGCACGAGTACTTTTGGCGGGAGGATGAGGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCAAAGAAGAGAGGATCGGATGGTGTAGAATCTGGACGTGGGCTTGCGGTTGGGGAGTTGAAGCGATGGATGATCCAGATTTTGAGTGGTCTTGATGCTTGTCATAGGAACATGATCGTTCATAGGGATTTGAAACCTAGCAATTTGTTGATCTCTGATGATGGCATGCTCAAACTTGCCGATTTTGGACAGGCAAGGATACTCATGTATCCTGATTATGTTGAATCGAATGAGATCTCTCAACCATGTGAGATCAACTCTTCAGATCAAGTACCTTCTTCTCAGCCATCTGCAGTTCTTCCTGGAACAGAAAGCTCTGTTCGAGAGGGTAATAGAACTGAAGAGCAAGAAACAATTAGCAAAGAGGAATATTTTAGAGTTTTAGATGAGTTGAAAGCAAAAAATTCAGGAAATGAATTTGACAAAGAAACATGTACTTATGATGGAGATACTTCTTGCTTAGCAACATGTACCACGAGTGATCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAATGGAAGGGGGAGTTCCAGCAGATGATGGACACGGTCCTCTCACTTCATGCGTCGGTACTCGCTGGTTCAGAGCCCCTGAATTACTCTATGGCTCTACAAGCTACGGTTTGGAGATCGATTTGTGGTCATTGGGCTGTATTTTTGCAGAACTTTTAACATTGGAACCCCTTTTTCCAGGAACTGCTGATATAGATCAAATGAGCAGAATTTTTGCTACTCTAGGCAACTTGACTGAAGAGTCATGGCCAGGTTGTTCCGAACTTCCTGATTTTCAGATTATATCATTCAACACAATCGAAAAGCCAATTGGTTTAGAAGCATGTCTTCCCAACTGTTCTGATGAAATTTCTATTGTCAAAAGACTTCTTTGTTACAACCCGGCTAATCGAGCAACTGCTATGGAATTGCTACAAGATAAGTATTTCACTGAGGAGCCACTTCCCGTTCCCTTGTCCGAGCTTCACGTTCCTTCGACCAAAAGTGGACAGGACGAAGATTCTCCTGCAGGATGGTACGATTACAACGAGTCAGATTCTGATATGGATGAACTCGGCCCGTTGAATGTTACCACCAATGCCACTGGTTACTCCATACAATTTGATTGA | 1446 | 44.67 | MEPSSAKSWSIHSRPDIIHKYGILERVGSGAYSDVYRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGELKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGMLKLADFGQARILMYPDYVESNEISQPCEINSSDQVPSSQPSAVLPGTESSVREGNRTEEQETISKEEYFRVLDELKAKNSGNEFDKETCTYDGDTSCLATCTTSDLEDDPFKGSSYSYEMEGGVPADDGHGPLTSCVGTRWFRAPELLYGSTSYGLEIDLWSLGCIFAELLTLEPLFPGTADIDQMSRIFATLGNLTEESWPGCSELPDFQIISFNTIEKPIGLEACLPNCSDEISIVKRLLCYNPANRATAMELLQDKYFTEEPLPVPLSELHVPSTKSGQDEDSPAGWYDYNESDSDMDELGPLNVTTNATGYSIQFD* | 482 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 17852764 | 17854649 | - | Chy5G104230.1 | Chy05g01377 | 227604 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy05g01377 | 481 | Pfam | Protein kinase domain | 292 | 422 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy05g01377 | 481 | Pfam | Protein kinase domain | 23 | 176 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy05g01377 | 481 | PANTHER | CELL DIVISION PROTEIN KINASE | 18 | 446 | - | - | |
Chy05g01377 | 481 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 439 | IPR011009 | - | |
Chy05g01377 | 481 | ProSiteProfiles | Protein kinase domain profile. | 21 | 422 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy05g01377 | 481 | SMART | serkin_6 | 21 | 422 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy05g01377 | 481 | MobiDBLite | consensus disorder prediction | 190 | 212 | - | - | |
Chy05g01377 | 481 | MobiDBLite | consensus disorder prediction | 190 | 223 | - | - | |
Chy05g01377 | 481 | ProSitePatterns | Protein kinases ATP-binding region signature. | 27 | 50 | IPR017441 | GO:0005524 | |
Chy05g01377 | 481 | PANTHER | CYCLIN-DEPENDENT KINASE 10 | 18 | 446 | - | - | |
Chy05g01377 | 481 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 111 | - | - | |
Chy05g01377 | 481 | Gene3D | Transferase(Phosphotransferase) domain 1 | 114 | 203 | - | - | |
Chy05g01377 | 481 | Gene3D | Transferase(Phosphotransferase) domain 1 | 264 | 433 | - | - | |
Chy05g01377 | 481 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 144 | 156 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g01377 | Chy-Chr5:17852764 | Chy02g02329 | Chy-Chr2:27266747 | 5.13E-21 | dispersed | |
Chy05g01377 | Chy-Chr5:17852764 | Chy03g01669 | Chy-Chr3:18451766 | 8.80E-16 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71288 | PF00069 | Pkinase | 2.30E-32 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy05g01377 | - | - | csv:101209606 | 947.192 |