Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01451 ATGACATCCGTGGCGGTTGCCGTTAACGGCGTCCGCGGCGGCAAAGGCGGTGGAGGAAGCCGCCGCGCTGTCAGATGGGCCGTCGAGAATCTCTTGCCGACCGCCGATCGTTTCATATTGGTTCACGTTATGCCCAAAATCACCTCCATCCCAACCCCAATGGGGGATCTTGTGGCTGTCTCAGAACTTGATGCAGATGTGGTAGCTCTTTATGTTCATGATGTGAAACAGAAATATGAACAAGTTTTTGTCCCTTTTAAGAAGTTATGTAGAAGAGAAAAGTTTCTTATTTTGGTAGAAACTTTGATTTTGGAGGATGATAATCCTGCCACTGCACTTTTGAGATATGCATCTGAATCTGGGATTAAAAGCTTGGTTTTGGGTTCTTGTTTTAGAACTTGCATAGCAAGGAAACTAAAAGGTGATTCAGTACCCTCTGCTATTATGAGAACTGCTTCTAGTTCTTTTGATGTTTATGTTAAATATAAGAGAAGAGTTATCACAAGAAAGGCTAGTACTGCTCCATCTACTGAAACTGACTCGAGGCAGTGGATGCTTGGTGACACTGATTACTACAGGGGTTCCAGTGCTGCCAGTGAAAAATCATTGGGAACTGATCTGTCTTCGTCTTACTTGTCGATTGTTCATCAAAGGGTTGACAGCATCGGAGTTGACTCTACTGAGCAACTGCATACTCTTACTGTGGAGGAAGATATGCAGTCTGAAGTTGAATCTCTGCAGCTAGAACTAGAGACCACTGTTTCCTTGTACAAACAAGCTTGTGAAGAACTAGTACGCACTCAGAAGAAGGTTCAGTCACTTGCATCAGAATACCTTGAAGAATCAAGAAAAGTGACTGATGCTGTGGAAAGGGAGCAAGCTTTGAGGAAAGTTGCTGCCAAGGAGAAAGCAAAGCACTTGGAAGCCATTAAAGAGCTCGAGGAGGCTAAAGACTTGCTGGCTAAAGAAGCTTATGAAAGACAGTTAGCGGAGCTTGATGCCTTGAAGGAGTCCGTGGAGAAGCAGAAAATTATCGATACTCTTCTGACTAATGATAGGAGATACAGAAGATATACCACTGCTGAAATAGAGGCTGCAACTAATTTCTTCAATGAAGTTAATGTGATCGGCGAGGGAGGATATGGGAAAGTCTATAAATGCAGTCTTGATCATACCCCTGTAGCCATTAAGGTTTATCAACACGACATATTCGAGAAAAAAGACGAGTTTCTAAAAGAGGTTGAAATTCTTAGCCAGATACGACATCCACACGTGGTTTTACTGCTTGGAGCTTGTCCCGAGCGAGGTTGCTTGATCTATGAATACATGGAAAATGGAAGCTTAGATGACCATATCTTGCTCCGGATTGGAAAAGCTCCCCTTCCTTGGTCTACTAGATTTAGAATAGTTTTTCAAGTAGCTTCTGGGCTTGCATTTTTACACAATTCAAAGCCAGAGCCTATTATTCATAGAGATCTCAAACCGGGTAATATCTTACTTGACAGAAACTTTGTAAGCAAAATCTCAGATGTTGGAATGGCTAAGATCATTGGCGATATCGTACCAGACAATGTGACGGAGTACCAGAACACCGTTCTTGCTGGTACTCTACATTACATGGATCCTGAATATCAGAGAACTGGCACACTCCGGCCGAAGTCGGATACTTATGCACTTGGAGTAACAATTCTGCAGTTATTGACTGGGCGACAGCCACACGGTCTTCTTCTCGCTATTGAAAATTCCATTGCAAGCGCTTCCCTTGCAGATATTCTAGACAAGTCAATTAGTGACTGGCCTCTAGCTAAAGCTGAAGAGCTAGCTCGACTTGCATTGAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGATCTTGAATCCGAAGTTCTTCCAATCCTTAAAAGACTTGTTGATTTTGCAGACACTTTTCAAAATGAAGACAAAGGTTTTGGCAACCCCCCCAGCCACTACTTCTGCCCAATCCTCCAGGAAGTCATGGAGGATCCTTATATAGCAGCTGATGGCTTTAGTTATGAGTATGTAGCCATTAAAGCATGGCTCGAGAAACACGACGTATCGCCGGTGACAAAGCTTAAGCTCCAGCATTCTTTTTTTATTCCAAACTACACTCTACGTTCTGCCATACGAGAGTGGAGGTCAAGAGTGACATTTTCGTCTTCCTAA 2184 43.27 MTSVAVAVNGVRGGKGGGGSRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLVAVSELDADVVALYVHDVKQKYEQVFVPFKKLCRREKFLILVETLILEDDNPATALLRYASESGIKSLVLGSCFRTCIARKLKGDSVPSAIMRTASSSFDVYVKYKRRVITRKASTAPSTETDSRQWMLGDTDYYRGSSAASEKSLGTDLSSSYLSIVHQRVDSIGVDSTEQLHTLTVEEDMQSEVESLQLELETTVSLYKQACEELVRTQKKVQSLASEYLEESRKVTDAVEREQALRKVAAKEKAKHLEAIKELEEAKDLLAKEAYERQLAELDALKESVEKQKIIDTLLTNDRRYRRYTTAEIEAATNFFNEVNVIGEGGYGKVYKCSLDHTPVAIKVYQHDIFEKKDEFLKEVEILSQIRHPHVVLLLGACPERGCLIYEYMENGSLDDHILLRIGKAPLPWSTRFRIVFQVASGLAFLHNSKPEPIIHRDLKPGNILLDRNFVSKISDVGMAKIIGDIVPDNVTEYQNTVLAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGRQPHGLLLAIENSIASASLADILDKSISDWPLAKAEELARLALKCLKLRCRDRPDLESEVLPILKRLVDFADTFQNEDKGFGNPPSHYFCPILQEVMEDPYIAADGFSYEYVAIKAWLEKHDVSPVTKLKLQHSFFIPNYTLRSAIREWRSRVTFSSS* 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18361498 18364709 + Chy5G104970.1 Chy05g01451 227678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01451 727 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 152 - -
Chy05g01451 727 CDD RING-Ubox_WDSUB1_like 657 697 - -
Chy05g01451 727 PANTHER OS02G0152300 PROTEIN 2 210 - -
Chy05g01451 727 PANTHER OS02G0152300 PROTEIN 225 721 - -
Chy05g01451 727 Pfam U-box domain 654 719 IPR003613 GO:0004842|GO:0016567
Chy05g01451 727 SMART Ubox_2 656 718 IPR003613 GO:0004842|GO:0016567
Chy05g01451 727 SUPERFAMILY Protein kinase-like (PK-like) 353 626 IPR011009 -
Chy05g01451 727 Coils Coil 296 342 - -
Chy05g01451 727 ProSitePatterns Protein kinases ATP-binding region signature. 376 397 IPR017441 GO:0005524
Chy05g01451 727 Gene3D Transferase(Phosphotransferase) domain 1 443 649 - -
Chy05g01451 727 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 652 724 IPR013083 -
Chy05g01451 727 Gene3D HUPs 2 159 IPR014729 -
Chy05g01451 727 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 2 210 - -
Chy05g01451 727 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 225 721 - -
Chy05g01451 727 Pfam Universal stress protein family 19 153 IPR006016 -
Chy05g01451 727 Coils Coil 257 277 - -
Chy05g01451 727 ProSiteProfiles U-box domain profile. 652 725 IPR003613 GO:0004842|GO:0016567
Chy05g01451 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Chy05g01451 727 SUPERFAMILY RING/U-box 643 721 - -
Chy05g01451 727 Gene3D Phosphorylase Kinase; domain 1 349 442 - -
Chy05g01451 727 CDD STK_N 3 160 - -
Chy05g01451 727 Pfam Protein kinase domain 371 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01451 727 SMART serkin_6 370 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01451 727 ProSiteProfiles Protein kinase domain profile. 370 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00834 Chy-Chr5:11953629 Chy05g01451 Chy-Chr5:18361498 1.52E-09 dispersed
Chy05g01451 Chy-Chr5:18361498 Chy09g01031 Chy-Chr9:12833155 1.19E-17 dispersed
Chy11g01644 Chy-Chr11:22933805 Chy05g01451 Chy-Chr5:18361498 3.95E-76 dispersed
Chy05g01451 Chy-Chr5:18361498 Chy04g00284 Chy-Chr4:2522498 9.24E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71292 PF00069 Pkinase 6.60E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01451 - - csv:101213999 1297.72