Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01452 ATGAAGAAGGACACCTCCATGAATTCTAACTTAAAGCTTATTCTACCTCCTCCCGACGAACTTACCTTTGGCTTCATAACTCGAAGCGGTACTTTCACCGATGGCGATTTGCTTGTTAATAAGGACGGCGTGCGGATTGTTTCTCAAACAGACGACGAAAGTCCTCCACCAATAAAGCCCTCAGACACCCATTTGTCTTTAGCAGATTTAGACTCGATAAAAGTCATTGGGAAAGGAAATGGTGGAATTGTTCAATTAGTCCGACATAAATGGACCAACCAGTTTTTTGCTCTAAAGGTGATTCAGATGAATGCCGAGGAATCTTATTGTCGGTTGGTTGCTAAGGAGCTAAAAATTAATCAGTTGGCACAAAACCCTTACATCGTTGTCTGTTATCAAATCTTCTATGACAATGGTGCCATTTTCATTATCTTGGAATACATGGATGGTGGATCGCTTGCAGATCTTCTGAAAAAAGTTGAAACAGTCCTTGAGCCGTATCTTGCAGCCATTTGTTACCAGGTACTAAACGGGTTAATATACCTTCACCATGAAAAACATGTCATCCACAGAGACCTTAAGCCTTCAAATTTATTGATAAATCATAGAGGGGAAGTTAAGATTACTGACTTTGGTGTAAGCGCTATACTGGCGAATACGGCCGATCAAGCAAATTCTTTTGTTGGCACATATGCTTACATGTCTCCGGAGAGACTCAATGGGGACAAATACGACAACAAAAGTGACATATGGAGTTTGGGTTTGATTTTGCTCGAATGTGCGACGGGTCAATTTCCATATGCTCCACCAGATAAAGAAAAAGGATGGGAAGGCTTTTTTGATGTTATGGTGGCCGTAGTAGAACTAGCATCGCCTTCTGCGCCTGAACAATTTTCTCCAGAGTTTTGCTCTTTCATTTCTTCATGCTTACAGAAAGACCCACAGAAGAGAAGCTCTGCACGTGAACTTCTGGTGCATCCTTTCATAAAAAAGTTCGAGAACTTCGATGTAGATCTTGCAGCTTACTTCAAAGATGCTGGTTCTCCATTGGCAACCTTCTAA 1062 41.43 MKKDTSMNSNLKLILPPPDELTFGFITRSGTFTDGDLLVNKDGVRIVSQTDDESPPPIKPSDTHLSLADLDSIKVIGKGNGGIVQLVRHKWTNQFFALKVIQMNAEESYCRLVAKELKINQLAQNPYIVVCYQIFYDNGAIFIILEYMDGGSLADLLKKVETVLEPYLAAICYQVLNGLIYLHHEKHVIHRDLKPSNLLINHRGEVKITDFGVSAILANTADQANSFVGTYAYMSPERLNGDKYDNKSDIWSLGLILLECATGQFPYAPPDKEKGWEGFFDVMVAVVELASPSAPEQFSPEFCSFISSCLQKDPQKRSSARELLVHPFIKKFENFDVDLAAYFKDAGSPLATF* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18365650 18368016 - Chy5G104980.1 Chy05g01452 227679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01452 353 SUPERFAMILY Protein kinase-like (PK-like) 55 334 IPR011009 -
Chy05g01452 353 Gene3D Transferase(Phosphotransferase) domain 1 150 348 - -
Chy05g01452 353 CDD PKc_MAPKK_plant_like 68 334 - -
Chy05g01452 353 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Chy05g01452 353 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 5 352 - -
Chy05g01452 353 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Chy05g01452 353 SMART serkin_6 70 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01452 353 PANTHER MAP KINASE KINASE 5 352 - -
Chy05g01452 353 Pfam Protein kinase domain 72 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01452 353 ProSiteProfiles Protein kinase domain profile. 70 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g01452 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01249 Chy05g01452 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01452 Chy-Chr5:18365650 Chy07g00059 Chy-Chr7:518162 3.22E-44 dispersed
Chy01g01557 Chy-Chr1:21538382 Chy05g01452 Chy-Chr5:18365650 1.94E-35 transposed
Chy01g02257 Chy-Chr1:26997923 Chy05g01452 Chy-Chr5:18365650 1.79E-28 transposed
Chy04g00712 Chy-Chr4:8666146 Chy05g01452 Chy-Chr5:18365650 8.39E-67 transposed
Chy04g01430 Chy-Chr4:20944512 Chy05g01452 Chy-Chr5:18365650 1.43E-73 transposed
Chy05g01408 Chy-Chr5:18086590 Chy05g01452 Chy-Chr5:18365650 6.07E-150 transposed
Chy08g00040 Chy-Chr8:1427312 Chy05g01452 Chy-Chr5:18365650 1.54E-34 transposed
Chy12g01379 Chy-Chr12:17994198 Chy05g01452 Chy-Chr5:18365650 1.11E-79 transposed
Chy02g01249 Chy-Chr2:9102360 Chy05g01452 Chy-Chr5:18365650 4.19E-165 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71293 PF00069 Pkinase 1.40E-69 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01452 K20603 - csv:101206374 707.983