Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g01469 ATGGATAAGAACGAAGAGACGGGGAGCCCTGGTTGGGGTGCTTCACTTTTCCTCCAGACGACTGAAGATGTTGCAAGAGCCGTGGCTGCTGCAGCTGCTGCCGCAACCGATGCTCGCTCTCCTCGTCCTTCTGTCATATATTCTTCAAAAGACGACGAGGGCGGCAGTCCACTACAGAGATTGCAGCGTCAAGTTAATAAAGTGCTCAAAGGGTTTTCTAGTCCTCCTCAAGTCAAAACTGCAGGAACTTACAATCCTGAAGTTCTCACTACCCAAAAGCGTCAGTGGGCCAATTTCCAGTTGCAGTACTTGGACCATCGATCTCAGAAGGAGCCAACTAGGATTTTTGAGAGCATGGTTGTTGTTGGCCTTCATCCTAATTGTGATATTCAGGCACTTCAGAGACAGTATGCTGCAAAGAGGTCAGAAGGTTCCGGGAGACTCCGAACTGCTCTTAATAATAGTCAGAATCAATCCCGGGTGGAACCTCATCTTGAACCACAGGTCCTATTTGTTTACCCTCCCGAGAAACAGTTACCACTCAAGTACAAGGACCTTCTTTCGTTCTGCTTTCCAGGAGGTGTGGAGGTTCACGCTGTTGAAAAAACTCCTTCCATGAGTGAGTTGAATGAGATTCTTCTTGGGCAGGAACACTTTAAGCAAAGTGATCTCTCATTTGTATTCCGCTTACAGGTTGCTGATGATTCAACATTGTATGGATGCTGTGTTTTAGTTGAAGAATTAGTGCAGAAACCATCTGGGTTGCTTTCTGTTTCTGAAAAACCATCTTCCCACTCATCCTTGAGCCGTTACTTACTAACCACACGCAGATGCTACTGCATCCTTTCTCGGTTGCCATTCTTCGAATTACATTTTGGTGTGTTGAATAGCATCTTCACCGAAGAAAGGCTGCAAAGATTAACAAAAGGTATTGGTGTTTTGAATTTGGAATCCACAGAGAATTTGAGCAATGATGAAGATTTGGTGGAAGACATGGGTTCCATGACTTTAGATCAGAGTGCAGCTGAAGACATGGATGAGGGAAAAGAGGAATATTCTCAAAGAATGGGTGATGAAAATCATGTTGACCATCAAGTGCTAGATGGAAATTTTCAATGTCTGAGAAAGGGTGTTAGCAACGATATAGTTGCCAAACTTGATCCAGAACCAGAGGTAGTTACAGCCAAAATAGAATCTGTTACTGTACATAAGGAAAATCATGATATTGAAGTTGATGATTTTACAAGCAACAAGCAGGCAATTGACAGGCGTTTACCGAATGCTGTTCTACCTCTCTTCCGTTATTATCAATATGAAAGCTCTGAATCATCGTCAAGTTTTCAGGGGTCTCCGAGTGAAGATAGAAATTTCAGAAGTGACGCCGATGACACAGAGACAGAGGAGGCATCTTTCTCTGGCCAGGATGATTCCACGGACCTACTTGACATTCTTGAATGGGCCAAGGAAAATAAGAATGGTTCATTACAAATCATATGCGAGTATTACCAGTTGCATTACCCTGCGAGAGGCTGTTCTGTTAAGTTTCATCCTTTGGAGCACCTGCATCTGATGGAGTATTATAGATCAGGCAAAACAGTTCTACATGTTGCTGGCTCGACCATTGATCCAAGATCATGCAGTACAAGTCTCGAATTAGCAGAGGCACACGGTGCTCTCATGGTAGAGGAGGAAGCAAATGCCTTGTCAATATGGACTGTTGCAAGCATTTGTGGTTCTTTGCGCCTTGAGCATATTTTATCAATTTTAGCTGGAGCGCTGCTGGAGAAGCAGATTGTGGTTGTTTGTTCCAATCTGGGTATCCTATCAGCTTCGGTTTTATCGATTATTCCTATGATTCGTCCCTACCAGTGGCAAAGCTTGTTGATGCCAGTGTTACCGAATGACATGCTGGACTTTTTGGATGCTCCTGTTCCTTACATAGTTGGTGTGAAAAATAAAACCAGTGAAGTACAGTCAAAGTTAACCAATGCCGTTTTGGTTGATGTGAACAAGAACCAGGTCAAGGCCCCAACAATACCTCAGTTGCCAAAACAAAAGGAGTTATTCTCATCATTAAGACCGTATCATGCAGAGCTAGTTGGAGAGAGCTTTTTAGGGAGAAAGAGGCCAGTGCATGAATGCACTGATGTGCAGGTTGAGGCCGCCAAGGGTTTCCTAAAAGTGCTAAGATTATACTTGGACTCCCTCTGCTCTAACCTCCGTTCACATACAATTACTAATGTACAATCGAATGATGATAAGGTATCATTACTCTTGAAGGAGAGCTTCATTGAGTCGTTCCCAAGCCGTGATCGGCCATTTTTGAAGTTGCCTTTATTTTTTATGGATTTCCGTAGAGATGTCAGAGACAAGGGGTGGCAGGCAGAAGCAGAAAATGCAAAGAAGATTCTGCAGCTCAATGGTCCCTCAAATAAATATACCTATTCTACTCTGAACTCTCCCTCTAATAAAACTAAAAACCATTTCTCCACTCTCCTCTGGAAAAAAACAATGAGCGCACGAAACAGGTTTCCGTTCACTGCAGCTCAATGGCAAGAGCTTGAGCACCAAGCTCTGATCTTCAAGTACATGGTCTCCGGCGTCCCTATCCCTCCTGAACTGCTTTACAGCATTAAGGCAACCTCTTTGGACACTCCTTTCATTTCCAGGCTCTTTCCTCACCAATATCCACAAGTTTCAGCAGTTGGATGGAACTACTTGCAGATGGGTTCTGGGAGGAAAATTGATCCTGAGCCTGGAAGGTGCAGAAGAACAGACGGTAAGAAATGGAGATGCTCCAAAGAGGCATACCCAGATTCTAAATACTGTGAGAGACATATGCACAGAGGTAAAAAACGTTCAAGAAAGCCTGTGGAACAAGTTTTGAAAACAACTCCCCTAAACTCTTCTAATCCATCCACCCCAGCCATCTCATCCATCACCCACAACTCTGAAACCCATCCCCATCCCCACCCTTTTCACTATCAAAATCCCTCTGCTTCTTCTCATCCATCCTTACTTCCAGATTACAGAAGAAACAGGTATGTTTATGGGGAGAAGGAAGAAGATTCCTTTGTGAGGGAACAACATTCTGGAAACATGAGAGGTTTCTCTGGTTCGTCTATGGATGATTCGTGGCAGTTAACTCCTCTGACAATGAGTTGCTCTTCCTCGTCCTCCAGATACAAGAACTGCTCTGCTTTGCAAGGTGATTACTCTTCTTACTTGCAGCTGCAGAGCTTTGGAAAATATAATGAGATGCAGAGTAAGATGGACAGAGATCAAGAACCACAGAAGACAGTGCATCATTTTTTTGATGAATGGTCTCCTAAACATAGAGAGTCTTGGGATGATTTGGATGATAAGTCATCTAATACTGGCTCAGTTTCTGCAACTCGGCTTTCAATGTCTACTCCTAACACAGACTCCTCCATCTTCAGTTCCAATAAGCGTAATGAAAACTGA 3465 43.61 MDKNEETGSPGWGASLFLQTTEDVARAVAAAAAAATDARSPRPSVIYSSKDDEGGSPLQRLQRQVNKVLKGFSSPPQVKTAGTYNPEVLTTQKRQWANFQLQYLDHRSQKEPTRIFESMVVVGLHPNCDIQALQRQYAAKRSEGSGRLRTALNNSQNQSRVEPHLEPQVLFVYPPEKQLPLKYKDLLSFCFPGGVEVHAVEKTPSMSELNEILLGQEHFKQSDLSFVFRLQVADDSTLYGCCVLVEELVQKPSGLLSVSEKPSSHSSLSRYLLTTRRCYCILSRLPFFELHFGVLNSIFTEERLQRLTKGIGVLNLESTENLSNDEDLVEDMGSMTLDQSAAEDMDEGKEEYSQRMGDENHVDHQVLDGNFQCLRKGVSNDIVAKLDPEPEVVTAKIESVTVHKENHDIEVDDFTSNKQAIDRRLPNAVLPLFRYYQYESSESSSSFQGSPSEDRNFRSDADDTETEEASFSGQDDSTDLLDILEWAKENKNGSLQIICEYYQLHYPARGCSVKFHPLEHLHLMEYYRSGKTVLHVAGSTIDPRSCSTSLELAEAHGALMVEEEANALSIWTVASICGSLRLEHILSILAGALLEKQIVVVCSNLGILSASVLSIIPMIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVKNKTSEVQSKLTNAVLVDVNKNQVKAPTIPQLPKQKELFSSLRPYHAELVGESFLGRKRPVHECTDVQVEAAKGFLKVLRLYLDSLCSNLRSHTITNVQSNDDKVSLLLKESFIESFPSRDRPFLKLPLFFMDFRRDVRDKGWQAEAENAKKILQLNGPSNKYTYSTLNSPSNKTKNHFSTLLWKKTMSARNRFPFTAAQWQELEHQALIFKYMVSGVPIPPELLYSIKATSLDTPFISRLFPHQYPQVSAVGWNYLQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKKRSRKPVEQVLKTTPLNSSNPSTPAISSITHNSETHPHPHPFHYQNPSASSHPSLLPDYRRNRYVYGEKEEDSFVREQHSGNMRGFSGSSMDDSWQLTPLTMSCSSSSSRYKNCSALQGDYSSYLQLQSFGKYNEMQSKMDRDQEPQKTVHHFFDEWSPKHRESWDDLDDKSSNTGSVSATRLSMSTPNTDSSIFSSNKRNEN* 1155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18431800 18440612 - Chy5G105150.1 Chy05g01469 227696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g01469 1154 Pfam DENN (AEX-3) domain 574 672 IPR001194 -
Chy05g01469 1154 MobiDBLite consensus disorder prediction 1112 1154 - -
Chy05g01469 1154 SMART QLQ_2 844 880 IPR014978 GO:0005524|GO:0005634|GO:0006355
Chy05g01469 1154 MobiDBLite consensus disorder prediction 944 989 - -
Chy05g01469 1154 Gene3D - 569 735 IPR043153 -
Chy05g01469 1154 MobiDBLite consensus disorder prediction 442 475 - -
Chy05g01469 1154 ProSiteProfiles WRC domain profile. 916 960 IPR014977 -
Chy05g01469 1154 MobiDBLite consensus disorder prediction 961 986 - -
Chy05g01469 1154 ProSiteProfiles Tripartite DENN domain profile. 149 800 IPR037516 -
Chy05g01469 1154 Pfam QLQ 845 878 IPR014978 GO:0005524|GO:0005634|GO:0006355
Chy05g01469 1154 MobiDBLite consensus disorder prediction 1122 1154 - -
Chy05g01469 1154 Pfam uDENN domain 167 244 IPR005113 -
Chy05g01469 1154 Gene3D - 104 310 - -
Chy05g01469 1154 PANTHER DENN (AEX-3) DOMAIN-CONTAINING PROTEIN 1 777 - -
Chy05g01469 1154 SMART DENN_cls 274 672 IPR001194 -
Chy05g01469 1154 ProSiteProfiles QLQ domain profile. 845 880 IPR014978 GO:0005524|GO:0005634|GO:0006355
Chy05g01469 1154 MobiDBLite consensus disorder prediction 32 57 - -
Chy05g01469 1154 Pfam WRC 917 959 IPR014977 -
Chy05g01469 1154 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 777 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00818 Chy-Chr2:5174256 Chy05g01469 Chy-Chr5:18431800 3.67E-35 dispersed
Chy04g00698 Chy-Chr4:8385309 Chy05g01469 Chy-Chr5:18431800 1.98E-46 dispersed
Chy05g01469 Chy-Chr5:18431800 Chy06g00228 Chy-Chr6:1494583 1.50E-14 dispersed
Chy05g01088 Chy-Chr5:15363709 Chy05g01469 Chy-Chr5:18431800 8.41E-06 transposed
Chy11g00519 Chy-Chr11:5699392 Chy05g01469 Chy-Chr5:18431800 7.31E-52 transposed
Chy11g01874 Chy-Chr11:24946179 Chy05g01469 Chy-Chr5:18431800 5.26E-65 transposed
Chy02g01265 Chy-Chr2:9244498 Chy05g01469 Chy-Chr5:18431800 7.99E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18052 PF02141 DENN 7.30E-23 CL0330 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g01469 - - csv:101208952 1495.33