Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy05g01469 | ATGGATAAGAACGAAGAGACGGGGAGCCCTGGTTGGGGTGCTTCACTTTTCCTCCAGACGACTGAAGATGTTGCAAGAGCCGTGGCTGCTGCAGCTGCTGCCGCAACCGATGCTCGCTCTCCTCGTCCTTCTGTCATATATTCTTCAAAAGACGACGAGGGCGGCAGTCCACTACAGAGATTGCAGCGTCAAGTTAATAAAGTGCTCAAAGGGTTTTCTAGTCCTCCTCAAGTCAAAACTGCAGGAACTTACAATCCTGAAGTTCTCACTACCCAAAAGCGTCAGTGGGCCAATTTCCAGTTGCAGTACTTGGACCATCGATCTCAGAAGGAGCCAACTAGGATTTTTGAGAGCATGGTTGTTGTTGGCCTTCATCCTAATTGTGATATTCAGGCACTTCAGAGACAGTATGCTGCAAAGAGGTCAGAAGGTTCCGGGAGACTCCGAACTGCTCTTAATAATAGTCAGAATCAATCCCGGGTGGAACCTCATCTTGAACCACAGGTCCTATTTGTTTACCCTCCCGAGAAACAGTTACCACTCAAGTACAAGGACCTTCTTTCGTTCTGCTTTCCAGGAGGTGTGGAGGTTCACGCTGTTGAAAAAACTCCTTCCATGAGTGAGTTGAATGAGATTCTTCTTGGGCAGGAACACTTTAAGCAAAGTGATCTCTCATTTGTATTCCGCTTACAGGTTGCTGATGATTCAACATTGTATGGATGCTGTGTTTTAGTTGAAGAATTAGTGCAGAAACCATCTGGGTTGCTTTCTGTTTCTGAAAAACCATCTTCCCACTCATCCTTGAGCCGTTACTTACTAACCACACGCAGATGCTACTGCATCCTTTCTCGGTTGCCATTCTTCGAATTACATTTTGGTGTGTTGAATAGCATCTTCACCGAAGAAAGGCTGCAAAGATTAACAAAAGGTATTGGTGTTTTGAATTTGGAATCCACAGAGAATTTGAGCAATGATGAAGATTTGGTGGAAGACATGGGTTCCATGACTTTAGATCAGAGTGCAGCTGAAGACATGGATGAGGGAAAAGAGGAATATTCTCAAAGAATGGGTGATGAAAATCATGTTGACCATCAAGTGCTAGATGGAAATTTTCAATGTCTGAGAAAGGGTGTTAGCAACGATATAGTTGCCAAACTTGATCCAGAACCAGAGGTAGTTACAGCCAAAATAGAATCTGTTACTGTACATAAGGAAAATCATGATATTGAAGTTGATGATTTTACAAGCAACAAGCAGGCAATTGACAGGCGTTTACCGAATGCTGTTCTACCTCTCTTCCGTTATTATCAATATGAAAGCTCTGAATCATCGTCAAGTTTTCAGGGGTCTCCGAGTGAAGATAGAAATTTCAGAAGTGACGCCGATGACACAGAGACAGAGGAGGCATCTTTCTCTGGCCAGGATGATTCCACGGACCTACTTGACATTCTTGAATGGGCCAAGGAAAATAAGAATGGTTCATTACAAATCATATGCGAGTATTACCAGTTGCATTACCCTGCGAGAGGCTGTTCTGTTAAGTTTCATCCTTTGGAGCACCTGCATCTGATGGAGTATTATAGATCAGGCAAAACAGTTCTACATGTTGCTGGCTCGACCATTGATCCAAGATCATGCAGTACAAGTCTCGAATTAGCAGAGGCACACGGTGCTCTCATGGTAGAGGAGGAAGCAAATGCCTTGTCAATATGGACTGTTGCAAGCATTTGTGGTTCTTTGCGCCTTGAGCATATTTTATCAATTTTAGCTGGAGCGCTGCTGGAGAAGCAGATTGTGGTTGTTTGTTCCAATCTGGGTATCCTATCAGCTTCGGTTTTATCGATTATTCCTATGATTCGTCCCTACCAGTGGCAAAGCTTGTTGATGCCAGTGTTACCGAATGACATGCTGGACTTTTTGGATGCTCCTGTTCCTTACATAGTTGGTGTGAAAAATAAAACCAGTGAAGTACAGTCAAAGTTAACCAATGCCGTTTTGGTTGATGTGAACAAGAACCAGGTCAAGGCCCCAACAATACCTCAGTTGCCAAAACAAAAGGAGTTATTCTCATCATTAAGACCGTATCATGCAGAGCTAGTTGGAGAGAGCTTTTTAGGGAGAAAGAGGCCAGTGCATGAATGCACTGATGTGCAGGTTGAGGCCGCCAAGGGTTTCCTAAAAGTGCTAAGATTATACTTGGACTCCCTCTGCTCTAACCTCCGTTCACATACAATTACTAATGTACAATCGAATGATGATAAGGTATCATTACTCTTGAAGGAGAGCTTCATTGAGTCGTTCCCAAGCCGTGATCGGCCATTTTTGAAGTTGCCTTTATTTTTTATGGATTTCCGTAGAGATGTCAGAGACAAGGGGTGGCAGGCAGAAGCAGAAAATGCAAAGAAGATTCTGCAGCTCAATGGTCCCTCAAATAAATATACCTATTCTACTCTGAACTCTCCCTCTAATAAAACTAAAAACCATTTCTCCACTCTCCTCTGGAAAAAAACAATGAGCGCACGAAACAGGTTTCCGTTCACTGCAGCTCAATGGCAAGAGCTTGAGCACCAAGCTCTGATCTTCAAGTACATGGTCTCCGGCGTCCCTATCCCTCCTGAACTGCTTTACAGCATTAAGGCAACCTCTTTGGACACTCCTTTCATTTCCAGGCTCTTTCCTCACCAATATCCACAAGTTTCAGCAGTTGGATGGAACTACTTGCAGATGGGTTCTGGGAGGAAAATTGATCCTGAGCCTGGAAGGTGCAGAAGAACAGACGGTAAGAAATGGAGATGCTCCAAAGAGGCATACCCAGATTCTAAATACTGTGAGAGACATATGCACAGAGGTAAAAAACGTTCAAGAAAGCCTGTGGAACAAGTTTTGAAAACAACTCCCCTAAACTCTTCTAATCCATCCACCCCAGCCATCTCATCCATCACCCACAACTCTGAAACCCATCCCCATCCCCACCCTTTTCACTATCAAAATCCCTCTGCTTCTTCTCATCCATCCTTACTTCCAGATTACAGAAGAAACAGGTATGTTTATGGGGAGAAGGAAGAAGATTCCTTTGTGAGGGAACAACATTCTGGAAACATGAGAGGTTTCTCTGGTTCGTCTATGGATGATTCGTGGCAGTTAACTCCTCTGACAATGAGTTGCTCTTCCTCGTCCTCCAGATACAAGAACTGCTCTGCTTTGCAAGGTGATTACTCTTCTTACTTGCAGCTGCAGAGCTTTGGAAAATATAATGAGATGCAGAGTAAGATGGACAGAGATCAAGAACCACAGAAGACAGTGCATCATTTTTTTGATGAATGGTCTCCTAAACATAGAGAGTCTTGGGATGATTTGGATGATAAGTCATCTAATACTGGCTCAGTTTCTGCAACTCGGCTTTCAATGTCTACTCCTAACACAGACTCCTCCATCTTCAGTTCCAATAAGCGTAATGAAAACTGA | 3465 | 43.61 | MDKNEETGSPGWGASLFLQTTEDVARAVAAAAAAATDARSPRPSVIYSSKDDEGGSPLQRLQRQVNKVLKGFSSPPQVKTAGTYNPEVLTTQKRQWANFQLQYLDHRSQKEPTRIFESMVVVGLHPNCDIQALQRQYAAKRSEGSGRLRTALNNSQNQSRVEPHLEPQVLFVYPPEKQLPLKYKDLLSFCFPGGVEVHAVEKTPSMSELNEILLGQEHFKQSDLSFVFRLQVADDSTLYGCCVLVEELVQKPSGLLSVSEKPSSHSSLSRYLLTTRRCYCILSRLPFFELHFGVLNSIFTEERLQRLTKGIGVLNLESTENLSNDEDLVEDMGSMTLDQSAAEDMDEGKEEYSQRMGDENHVDHQVLDGNFQCLRKGVSNDIVAKLDPEPEVVTAKIESVTVHKENHDIEVDDFTSNKQAIDRRLPNAVLPLFRYYQYESSESSSSFQGSPSEDRNFRSDADDTETEEASFSGQDDSTDLLDILEWAKENKNGSLQIICEYYQLHYPARGCSVKFHPLEHLHLMEYYRSGKTVLHVAGSTIDPRSCSTSLELAEAHGALMVEEEANALSIWTVASICGSLRLEHILSILAGALLEKQIVVVCSNLGILSASVLSIIPMIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVKNKTSEVQSKLTNAVLVDVNKNQVKAPTIPQLPKQKELFSSLRPYHAELVGESFLGRKRPVHECTDVQVEAAKGFLKVLRLYLDSLCSNLRSHTITNVQSNDDKVSLLLKESFIESFPSRDRPFLKLPLFFMDFRRDVRDKGWQAEAENAKKILQLNGPSNKYTYSTLNSPSNKTKNHFSTLLWKKTMSARNRFPFTAAQWQELEHQALIFKYMVSGVPIPPELLYSIKATSLDTPFISRLFPHQYPQVSAVGWNYLQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKKRSRKPVEQVLKTTPLNSSNPSTPAISSITHNSETHPHPHPFHYQNPSASSHPSLLPDYRRNRYVYGEKEEDSFVREQHSGNMRGFSGSSMDDSWQLTPLTMSCSSSSSRYKNCSALQGDYSSYLQLQSFGKYNEMQSKMDRDQEPQKTVHHFFDEWSPKHRESWDDLDDKSSNTGSVSATRLSMSTPNTDSSIFSSNKRNEN* | 1155 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 18431800 | 18440612 | - | Chy5G105150.1 | Chy05g01469 | 227696 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy05g01469 | 1154 | Pfam | DENN (AEX-3) domain | 574 | 672 | IPR001194 | - | |
Chy05g01469 | 1154 | MobiDBLite | consensus disorder prediction | 1112 | 1154 | - | - | |
Chy05g01469 | 1154 | SMART | QLQ_2 | 844 | 880 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Chy05g01469 | 1154 | MobiDBLite | consensus disorder prediction | 944 | 989 | - | - | |
Chy05g01469 | 1154 | Gene3D | - | 569 | 735 | IPR043153 | - | |
Chy05g01469 | 1154 | MobiDBLite | consensus disorder prediction | 442 | 475 | - | - | |
Chy05g01469 | 1154 | ProSiteProfiles | WRC domain profile. | 916 | 960 | IPR014977 | - | |
Chy05g01469 | 1154 | MobiDBLite | consensus disorder prediction | 961 | 986 | - | - | |
Chy05g01469 | 1154 | ProSiteProfiles | Tripartite DENN domain profile. | 149 | 800 | IPR037516 | - | |
Chy05g01469 | 1154 | Pfam | QLQ | 845 | 878 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Chy05g01469 | 1154 | MobiDBLite | consensus disorder prediction | 1122 | 1154 | - | - | |
Chy05g01469 | 1154 | Pfam | uDENN domain | 167 | 244 | IPR005113 | - | |
Chy05g01469 | 1154 | Gene3D | - | 104 | 310 | - | - | |
Chy05g01469 | 1154 | PANTHER | DENN (AEX-3) DOMAIN-CONTAINING PROTEIN | 1 | 777 | - | - | |
Chy05g01469 | 1154 | SMART | DENN_cls | 274 | 672 | IPR001194 | - | |
Chy05g01469 | 1154 | ProSiteProfiles | QLQ domain profile. | 845 | 880 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Chy05g01469 | 1154 | MobiDBLite | consensus disorder prediction | 32 | 57 | - | - | |
Chy05g01469 | 1154 | Pfam | WRC | 917 | 959 | IPR014977 | - | |
Chy05g01469 | 1154 | PANTHER | SUPPRESSION OF TUMORIGENICITY 5 ST5 | 1 | 777 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g00818 | Chy-Chr2:5174256 | Chy05g01469 | Chy-Chr5:18431800 | 3.67E-35 | dispersed | |
Chy04g00698 | Chy-Chr4:8385309 | Chy05g01469 | Chy-Chr5:18431800 | 1.98E-46 | dispersed | |
Chy05g01469 | Chy-Chr5:18431800 | Chy06g00228 | Chy-Chr6:1494583 | 1.50E-14 | dispersed | |
Chy05g01088 | Chy-Chr5:15363709 | Chy05g01469 | Chy-Chr5:18431800 | 8.41E-06 | transposed | |
Chy11g00519 | Chy-Chr11:5699392 | Chy05g01469 | Chy-Chr5:18431800 | 7.31E-52 | transposed | |
Chy11g01874 | Chy-Chr11:24946179 | Chy05g01469 | Chy-Chr5:18431800 | 5.26E-65 | transposed | |
Chy02g01265 | Chy-Chr2:9244498 | Chy05g01469 | Chy-Chr5:18431800 | 7.99E-98 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18052 | PF02141 | DENN | 7.30E-23 | CL0330 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy05g01469 | - | - | csv:101208952 | 1495.33 |