Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy05g01472 | ATGAAGTGGAGATCCATATTCTCCAGCTGCTGCGAGGTGGAGTCCCAGTCGTCGGAGGTGATGAAAGTAGTGGCCGCCAATAAGCCTAGTTCCTTCCAGAGGTTTTCCAAACTCGATTTCACTAACCCTAACTCAACCATCTCCGAGGATCTTTCAATCTCTCTTGCCGGATCTGACATCCACGTCTTCACCCTCGCCGAGTTGAAGCTCATCTCTCAGGCCTTTTCTTCCTCGAACTTCCTTGGAGAGGGTGGCTTCGGCCCCGTCTACAAAGGCTTCCTCGATGACAATCTCAGGCCTGGCTTGCTCCCTCAGCCCGTTGCCATTAAACTCCTCGATTTGGATGGAACCCAAGGCCACAGGGAGTGGCTGACGGAGGTCATTTTTCTAGGGCAACTTAAGCACGCCCATCTTGTCAAGCTAATTGGATATTGCTGCGAAGACGAACATAGGATGCTCGTGTACGAGTATATGCCCAGAGGAAGCTTGGAGAATCAACTTTTCAAAAAATATTCAATCCCATTGCCGTGGTCCACGAGAATGAAGATCGCTCTTGGAGCTGCGGAGGGTCTCGCCTTCCTACACGAAGCAGACAAACCAGTCATTTACAGAGATTTCAAAGCCTCCAACGTTCTGCTTGATTCTGATTACACTGCGAAGCTATCTGATTTTGGTCTGGCCAAAGACGGTCCAGAAGGAGACAACACTCACGTCTCCACCCGAGTAATGGGTACACATGGATATGCAGCGCCGGAGTATATAATGACTGGGCATTTGACGGCGATGAGTGATGTGTATAGCTTTGGAGTAGTGCTTTTGGAGCTGCTGACAGGGCGGAGGTCGGTGGAGAAGAGCAGCCGTAAGAGACAGCAGAATTTGGCCGAATGGGCGAGGCCGATGCTGAATGATCCCAGGAAGCTAAGCCGTATAATAGATCCCAGACTTGAAGGCCAATACTCCGAAATGGGAGCTCAGAAAGCAGCCTCGTTGGCTTACCAATGCTTAAGCCACCGCCCAAAGCAGAGGCCCACCATGAGCGCCGTCGTCAAGGTATTAGAGCCACTCAAGGATTTCGATGATATTTCATCAGGCACCTTTGTGTACACGGTTATGGATCAGCCAAATTCAAATCAAGCCTGA | 1140 | 50.44 | MKWRSIFSSCCEVESQSSEVMKVVAANKPSSFQRFSKLDFTNPNSTISEDLSISLAGSDIHVFTLAELKLISQAFSSSNFLGEGGFGPVYKGFLDDNLRPGLLPQPVAIKLLDLDGTQGHREWLTEVIFLGQLKHAHLVKLIGYCCEDEHRMLVYEYMPRGSLENQLFKKYSIPLPWSTRMKIALGAAEGLAFLHEADKPVIYRDFKASNVLLDSDYTAKLSDFGLAKDGPEGDNTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVEKSSRKRQQNLAEWARPMLNDPRKLSRIIDPRLEGQYSEMGAQKAASLAYQCLSHRPKQRPTMSAVVKVLEPLKDFDDISSGTFVYTVMDQPNSNQA* | 380 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 18455181 | 18456702 | + | Chy5G105180.1 | Chy05g01472 | 227699 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy05g01472 | 379 | PANTHER | OS01G0588500 PROTEIN-RELATED | 23 | 374 | - | - | |
| Chy05g01472 | 379 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 364 | IPR011009 | - | |
| Chy05g01472 | 379 | Gene3D | Phosphorylase Kinase; domain 1 | 39 | 157 | - | - | |
| Chy05g01472 | 379 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 201 | 213 | IPR008271 | GO:0004672|GO:0006468 | |
| Chy05g01472 | 379 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 23 | 374 | - | - | |
| Chy05g01472 | 379 | ProSiteProfiles | Protein kinase domain profile. | 75 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Chy05g01472 | 379 | CDD | STKc_IRAK | 81 | 355 | - | - | |
| Chy05g01472 | 379 | Gene3D | Transferase(Phosphotransferase) domain 1 | 158 | 366 | - | - | |
| Chy05g01472 | 379 | Pfam | Protein tyrosine and serine/threonine kinase | 79 | 352 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Chy02g01277 | Chy05g01472 | CCT | |
| Chy02g01277 | Chy05g01472 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy01g02167 | Chy-Chr1:26286929 | Chy05g01472 | Chy-Chr5:18455181 | 2.74E-151 | dispersed | |
| Chy04g02327 | Chy-Chr4:27652424 | Chy05g01472 | Chy-Chr5:18455181 | 3.15E-66 | dispersed | |
| Chy05g01472 | Chy-Chr5:18455181 | Chy07g00286 | Chy-Chr7:2330110 | 3.58E-160 | dispersed | |
| Chy02g01319 | Chy-Chr2:9766783 | Chy05g01472 | Chy-Chr5:18455181 | 1.44E-149 | transposed | |
| Chy07g01112 | Chy-Chr7:16064848 | Chy05g01472 | Chy-Chr5:18455181 | 7.26E-157 | transposed | |
| Chy02g01277 | Chy-Chr2:9367399 | Chy05g01472 | Chy-Chr5:18455181 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 71294 | PF07714 | PK_Tyr_Ser-Thr | 4.10E-47 | CL0016 | Chy | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy05g01472 | - | - | csv:101209441 | 746.888 |