Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00017 ATGCTTGGAGTGGTCTATAGGGACTTAAAACCAGAGAATGTATTGGTTCGCGATGATGGCCACATAATGCTCTCGGATTTCGACCTTTCACTAAGATGTGCAGTGTCACCCACCCTGATAAAAACTTCATACGATTCTGACCCATCAAAACGAGCTGCATTCTGTGTCCAACCTGCCTGTATTGAGCCATCATCAGTTTGCATCCAACCTGCATGTTTTATTCCTCGACTCTTCCCTCAGAAAAGCAAAAAGAAAAGTTCCAAGCCTCGAAGTGATTTGGGGTTGCAATCCAGTACTCTTCCTGAGCTGGTAGCAGAGCCTACTGCCGCCCGCTCCATGTCTTTTGTTGGCACCCATGAATACCTAGCCCCTGAAATCATCAAAGGAGAGGGTCATGGAAGTGCTGTTGACTGGTGGACTTTTGGCATTTTCTTGCATGAACTATTGTATGGAAAGACCCCCTTCAAGGGATCGGGAAACAGAGCCACACTATTCAATGTAGTAGGGCAGCAGCTGAAGTTCCCAGAGTCTCCGGCAACTAGTTATGCCAGCCGAGATCTTATTCGAGGTTTGCTAGTAAAGGAGCCCCAGCATCGACTTGGAGTGAAGAGGGGAGCAACGGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATACGATGCAGCACACCCCCAGAAGTGCCAAGACCAATGGAGGCCGAGCTGCCCAAGTTTGGGGTAGTTGACACAACAGGGGTTGGCAGCAGCAGTAAGAGGATGGTAGGTACAGATGTTGTTAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA 828 47.95 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSYDSDPSKRAAFCVQPACIEPSSVCIQPACFIPRLFPQKSKKKSSKPRSDLGLQSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVVDTTGVGSSSKRMVGTDVVKSGGQYLDFEFF* 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 112249 113076 - Chy6G105450.1 Chy06g00017 227726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00017 275 Pfam Protein kinase domain 112 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00017 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Chy06g00017 275 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 275 - -
Chy06g00017 275 SMART serkin_6 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00017 275 Gene3D Transferase(Phosphotransferase) domain 1 110 232 - -
Chy06g00017 275 Gene3D Transferase(Phosphotransferase) domain 1 1 92 - -
Chy06g00017 275 PANTHER FLIPPASE KINASE 1-RELATED 1 275 - -
Chy06g00017 275 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00017 275 SUPERFAMILY Protein kinase-like (PK-like) 3 242 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00017 Chy-Chr6:112249 Chy12g00620 Chy-Chr12:8912134 5.96E-137 dispersed
Chy06g00017 Chy-Chr6:112249 Chy08g00920 Chy-Chr8:16632692 4.69E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71296 PF00069 Pkinase 8.70E-21 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00017 - K08286 csv:101217551 543.888