Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00123 ATGGGAACTAGTGAAGAGGCGAAGTCTGTGAAGACTGAAAAACCATCCTCACCAATGCCGCTGGATCAGAATGGTGTACCAAATTCAGCCAGTATTCATGTTTTTCCTGATTGGGCAGCCATGCAGGCATATTATGGTCCTAGAGTTGCAGTTCCACCATACTACAACTCTGCTGTGGCTTCAGGTCATGCACCTCACCCTTATATGTGGGGTCCACCACAGATGATTCCTCCATATGGTACTCCTTATGCAGCAATCTATTCTCATGGAGGTGTTTATGCCCATCCTGCAGTTTCTATGGGACCACACTCACATGCCCCTGGTGTTCCTTCATCACCTGCGCAGGCTGCAACTCCTTTGAGCATTGAAACACCTTCAAAGGTATCTGGAAATAGTAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTTGATGGCCTGGCAATGTCCATAGGCAATGTTAGCACTGAGAGTGCTGAAGGGGGAGCTGAGCATGGGCAATCAGAGAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCTGGGGCAAATCACAACAAAAGGAAACGAAGCCGTGAGGGAACACCTACCACTGGTGGTAAGGATGCAAAAATTGAGCCACAAGCAAGTCCTGTTACTGCTGCTGAAATGAATGAAAGCTCTAGCAAGTTATTGGGCACAACCAAAGCAACTAATGCTACTGGAAAACTTGGATCTGTGATTTCTCCTGGAATGTCGACTGCATTGGAACTGAGAAATCCTTCCAGTATGAACGCTATGACAAGTCCAACTACAGTTCCACCTTGTTCAGTGTTGCCTTCTGAAGTTTGGCTCCAGAATGAAAAAGAACTAAAACGGGAAAGGAGAAAACAGTCTAACAGAGAATCCGCTAGGAGGTCAAGGCTAAGGAAGCAGGCTGAAACAGAAGAACTAGCTCGTAAAGTTGATTCGCTGACTGCAGAGAATGTCGCTATTCGATCTGAAATAAGTAGATTGTCAGAGAATTCCGAGAAACTTAAGAAAGAGAACTCTACACTCATGGAAAAACTAAAAAACTCTCAATCAGGACGATCAGAAGCATTAGACATGAATGAAAAGAAAATGCAACAACCTGTAAGCGCAGAAATGAAAGGACCTGTGAATAAAAGCATTAGCGAAGAAAGTATCATCTGCAAGAAAAACTCGAGTTCGGGTGCAAAACTGCGCCAGCTCTTGGACACGAGTCCAAGGGCGGATGCAGTTGCTGCTAGCTAA 1263 44.89 MGTSEEAKSVKTEKPSSPMPLDQNGVPNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVASGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHAPGVPSSPAQAATPLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVSTESAEGGAEHGQSESMETEGSSDGSDGTTAGANHNKRKRSREGTPTTGGKDAKIEPQASPVTAAEMNESSSKLLGTTKATNATGKLGSVISPGMSTALELRNPSSMNAMTSPTTVPPCSVLPSEVWLQNEKELKRERRKQSNRESARRSRLRKQAETEELARKVDSLTAENVAIRSEISRLSENSEKLKKENSTLMEKLKNSQSGRSEALDMNEKKMQQPVSAEMKGPVNKSISEESIICKKNSSSGAKLRQLLDTSPRADAVAAS* 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 815385 818638 + Chy6G106510.1 Chy06g00123 227832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00123 420 SUPERFAMILY Leucine zipper domain 287 343 IPR046347 GO:0003700|GO:0006355
Chy06g00123 420 Coils Coil 304 352 - -
Chy06g00123 420 MobiDBLite consensus disorder prediction 155 185 - -
Chy06g00123 420 MobiDBLite consensus disorder prediction 216 246 - -
Chy06g00123 420 CDD bZIP_plant_GBF1 289 337 IPR045314 GO:0003700|GO:0006355
Chy06g00123 420 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 420 IPR044827 GO:0003700|GO:0006355|GO:0043565
Chy06g00123 420 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Chy06g00123 420 MobiDBLite consensus disorder prediction 285 315 - -
Chy06g00123 420 PANTHER G-BOX-BINDING FACTOR 3 1 420 - -
Chy06g00123 420 MobiDBLite consensus disorder prediction 186 202 - -
Chy06g00123 420 MobiDBLite consensus disorder prediction 1 28 - -
Chy06g00123 420 Pfam bZIP transcription factor 284 346 IPR004827 GO:0003700|GO:0006355
Chy06g00123 420 Gene3D - 287 360 - -
Chy06g00123 420 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 291 306 IPR004827 GO:0003700|GO:0006355
Chy06g00123 420 MobiDBLite consensus disorder prediction 337 384 - -
Chy06g00123 420 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 286 349 IPR004827 GO:0003700|GO:0006355
Chy06g00123 420 MobiDBLite consensus disorder prediction 155 246 - -
Chy06g00123 420 SMART brlzneu 284 348 IPR004827 GO:0003700|GO:0006355
Chy06g00123 420 MobiDBLite consensus disorder prediction 399 420 - -
Chy06g00123 420 Pfam Disordered region downstream of MFMR 134 266 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00123 Chy-Chr6:815385 Chy06g02175 Chy-Chr6:26032096 5.37E-44 dispersed
Chy06g00123 Chy-Chr6:815385 Chy04g00130 Chy-Chr4:1169547 2.48E-45 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18070 PF16596 MFMR_assoc 5.40E-21 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00123 K09060 - csv:101213720 791.186