Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00152 ATGTCAGTTTATGATGCTGCATTTGTGAACACGGAGCTCTCTAAACCCACTTCGATTTTCGGCCTTCGGCTTTGGGTTGTTATCGGAATCTTTGTTGGAGCTCTAATAGTTCTTGCACTGTTTCTTCTTTCGCTTTGCCTCACTTCTCGCAAGCGGAACCGCCATAAGAATCAAATCGGTTTCCCTAAGTCCACTACTCCCCATTCTCCTCCTGCCGTTTCGAAAGAGATCCAGGAGATTGTACACCATGCCGTGCCGGATCATCACCACCATGTTCAGCCGGAAATTCATGTCGAGATCGGGAAATTGGAGCATCGAGTTGTTTTTTCTGATAGACCTTCTAGTGGTGAGAGTAGAGGTACTGTGAGTGAAACTGCTTCTTTTGGATCTGGTACTGTTGGGCCTGAGGTTTCACACCTCGGTTGGGGAAGATGGTATACTCTGAGAGAGCTTGAGGCGGCTACTAATGGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGTTATGGGATCGTGTATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAATCTCTTGAATAACAGGGGTCAAGCTGAAAGGGAATTCAAAGTGGAAGTGGAAGCAATTGGACGGGTAAGACACAAGAATCTCGTCAGGTTACTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACGTTAACAATGGTAATTTAGACCAATGGCTTCATGGCGATGTTGGGGATGTGAGCCCTTTGACGTGGGAGATTCGTGTTAACATCATACTTGGAACAGCAAAGGGATTAGCTTATCTTCATGAGGGTCTTGAACCAAAGGTTGTGCACCGTGATGTAAAATCAAGCAATATACTGCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGACTGGCCAAGCTTCTCTGTTCTGAAAGAAGTTATGTGACAACTCGTGTAATGGGCACATTTGGCTATGTTGCACCTGAGTACGCCTGCACTGGAATGTTGAATGAAAAGAGTGATGTTTATAGCTTTGGAATTCTGATTATGGAGATAATTTCTGGGCGGAGCCCTGTTGATTACAGTAGACCTCAAGGAGAGGTAAATTTGGTGGATTGGTTGAAAGCTATGGTTGGAGACAGAAAATCTGAGGAGGTGGTTGATCTGAAGTTACGCGAGAAGCCACCTTCCAAAGGTCTCAAACGCGTTTTGCTGGTTGCTCTTCGTTGTGTCGACCCTGATGCCACGAAGAGGCCGAAAATGGGACATGTCATCCACATGCTTGAGGCAGATAATTTGTTATCTCACGATGAACACCGGGTTGGCAAGGATTCTACTCATTCAATTCAAGGCCATCAACATGAGAACCGAGCCGTTTCAAGACGAGTTAACAATCAGAAAGATGAAGGAGCATCTTCTAATATAAGTGAAGGTGACAGTGATGGAAACATTCACCATCCAAGTAGGTGGAGATAA 1479 44.69 MSVYDAAFVNTELSKPTSIFGLRLWVVIGIFVGALIVLALFLLSLCLTSRKRNRHKNQIGFPKSTTPHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGTVSETASFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLDQWLHGDVGDVSPLTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVDWLKAMVGDRKSEEVVDLKLREKPPSKGLKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRVGKDSTHSIQGHQHENRAVSRRVNNQKDEGASSNISEGDSDGNIHHPSRWR* 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1007186 1009431 + Chy6G106800.1 Chy06g00152 227861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00152 492 Coils Coil 450 470 - -
Chy06g00152 492 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00152 492 Pfam Protein tyrosine and serine/threonine kinase 161 429 IPR001245 GO:0004672|GO:0006468
Chy06g00152 492 ProSiteProfiles Protein kinase domain profile. 158 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00152 492 CDD STKc_IRAK 164 430 - -
Chy06g00152 492 MobiDBLite consensus disorder prediction 466 482 - -
Chy06g00152 492 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Chy06g00152 492 Gene3D Phosphorylase Kinase; domain 1 140 233 - -
Chy06g00152 492 MobiDBLite consensus disorder prediction 114 130 - -
Chy06g00152 492 SUPERFAMILY Protein kinase-like (PK-like) 137 430 IPR011009 -
Chy06g00152 492 MobiDBLite consensus disorder prediction 111 130 - -
Chy06g00152 492 MobiDBLite consensus disorder prediction 441 492 - -
Chy06g00152 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Chy06g00152 492 Gene3D Transferase(Phosphotransferase) domain 1 234 446 - -
Chy06g00152 492 MobiDBLite consensus disorder prediction 441 465 - -
Chy06g00152 492 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 446 - -
Chy06g00152 492 PANTHER OS01G0323000 PROTEIN 2 446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00904 Chy-Chr2:5874875 Chy06g00152 Chy-Chr6:1007186 0 dispersed
Chy03g01555 Chy-Chr3:17717842 Chy06g00152 Chy-Chr6:1007186 0 dispersed
Chy06g00152 Chy-Chr6:1007186 Chy11g01010 Chy-Chr11:14271081 1.01E-169 dispersed
Chy01g00791 Chy-Chr1:6342088 Chy06g00152 Chy-Chr6:1007186 3.76E-178 transposed
Chy06g00152 Chy-Chr6:1007186 Chy06g00975 Chy-Chr6:7208470 1.48E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71301 PF07714 PK_Tyr_Ser-Thr 1.40E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00152 - - csv:101219288 947.577