Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00156 ATGGCATGCAGAAGGTTTGCTGCGTGCTCATTTCAATCTTTCAAGCCTTACACAAGGATTTCCGAATACTTTGACCGAGTTCTTAGACCGAATGTTGTTCTAAATAAAAGATACTATAAAGATGAATCTCACAGTTTCAAAAGAGCCACTGTACGTGGTTTACATAGCCCAAGTTATGGTACACATCGCATTGATACATTTCTGCCCGCATCGTCAATGAAATACTGGAACACTATCCCTCTTACTTGTTTTGGGAACTTGTCAAATTATCGGAATTATTCATCAGCTTCTGGTAGAAAAGCTGATATAAGTGGAGATACTGGTGTGCCAGCAGCTTCTTCGGGTGTTGAACCGGATATCAGTAACTCCCCTGATGTTGGAAGGGACTTGCTTGAAAAGGTTAAGGATGTCTGGCAAAGTGCTGTTGATGCAGCATCTTTCACGGGACAGAAGGCTAAAGAAGTTTCGGATGAATTATCTCCGCATGTAGATAAACTACTCGATTCACATCCGTATCTAAAAAATGTGATTGTTCCTGTGAGTATGACCTTGGGTGCTACTCTTTTGGCTTGGCTGGTAATGCCTAGGCTTTTGAAGAGATTTCATAAGTATTCAATGCGAAGTCCTGTTGCCATAATATCTGGATCCTTACCTAGTGAGGAAATTCCATATGAGAAAAGTTTTTGGGGTGCACTCGAGGATCCTTTGCGATATCTTGTTACCTTCTTTGCATTTTCTCAAATTGGCGTGATAGTTGCACCAACTGCAGTAGCACAGGAGTTTGTTTCACAGGCATGCAGGGGGGCTGTAATCCTTTCCCTTGTCTGGTTTATTTATCGCTGGAAAACAAATGTGTTATCTCGAGCCTTGGCCACCAAGACTTTTGCAGGGCTTGATCGTGACAGGTTACTTACCCTTGACAAAGTTTCATCTGTTGCCCTATTTGCTATTGGATTGATGGCTTTGGCCGAGGCATCTGGTGTGGCTGTTCAATCCATGTTGACGGTTGGTGGTATTGGAGGAGTGGCCACTGCTTTTGCTGCGAGGGATATACTTGGGAATATTTTGAGTGGCTTAACGATGCAGTTTTCACAGCCCTTCTCACTTGGAGATACAATTAAGGCTGGTGCTATTGAAGGTCAAGTTGTGGAAATGGGACTCATGACAACATCGCTATTAAGTGCTGAAAAATTTCCAGTCGTTGTTCCAAATTCTCTGTTTTCTAGCCAGGTAATTATAAATAAGTCGAGGGCACAGTGGCGTGCAATCGTGAAGAGGGTTCCTTTGCAAGTTGATGATATTAGTACAGTTTCTCAGATAACAGATGATATTAAGAATATGCTCACGTCTCATCCTAAGGTGTTCTTGGGCAAGGAGGCTCCTTATTGTTTTCTCTCTCAAATTGAAAGTACATATGCAGAATTGACATTAGGTTGTAACCTTAAAAAAATGGGTAAAGATGAATCGTTCTCTACAGAGCAAGATATTCTCCTTCAGTCAGTACAAATCATTAAGGCAAAAGCTTGGAATATGTTCGACAGGCCAAGAATGCCAGATCGGAATGTTCGAACTTGCTGCTCGGCATGGGTTGCTGGCATTTCTGTAAAGCCTCACAAAATGGAAAATTGTTTTGATATGAAAATAGCTACAGGTTTCGCCATGGTTGGAACTAATAGAGGGGATGAGAGAGTAAAGATGCTGCTCATAACAATGGCGGAAAATAAAGGTCTTCACGTCGTTGTATTTCCATGGTCAGCCTTTGGCCATTTAATTCCCCATTTTCAACTCTCCATAGCTTTAGCCAAAGCAGGTGTCCATGTCTCCTTCATCTCCACCCCCAAAAATCTGCAAAGACTTCCCCCAATTCCTCCTTCCCTCTCCTCCTTCATAACTCTGGTCCCGATTCCACTCCCAAAACTCCCCGGCGACCCTCTGCCGGAAGGTGCAGAGGCCACCGTCGACATTCCGTTCGACAAAATCCCCTTCCTTAAAGTAGCTCTAGATCTCGCCGAGCCACCGTTTCGAAAGTTCATCGCCGATCATGTACATCCGCCGGATTGGTTCATCGTCGATTTCAACGTTAGTTGGATCGGTGACATTGCTCGAGAATTTCGAATTCCGATCGTTTTCTTTCGCGTTCTGTCCCCCGGATTTCTCGCTTTCTACGCCCATCTTCTTGGGACTAGGTTGCCTCTGACGGAGATCGGAAGCCTGATCTCGCCACCGCCGATCGAAGGCTCTACAGTGGCGTACCGGCGTCATGAAGCGGTGGGAATTCGCGCTGGTTTTTTTGAGAAGAACGATTCCGGGTTGAGTGATTACGAGAGGGTTACGAAGATTAATACCGCGTGTCGAGTAATTGCAGTTCGTAGTTGTTATGAATTTGATGTTGATTATTTGAAGTTGTACTCGAATTATTGCGGAAAGAAAGTGATTCCTCTAGGATTTCTTCCTCCAGAAAAGCCACCAAAAACAGAGTTCGAGGCCAATTCGCCATGGAAATCGACCTTCGAGTGGCTCGATCAACAAAACCCGAAATCGGTGGTGTTCGTCGGATTCGGAAGCGAATGCAAGCTCACAAAGGATCAAATTCACGAGATAGCACGTGGAGTGGAGCTCTCGGAGTTGCCATTTTTGTGGTCTCTGAGAAAGCCAGACTGGGTGGAGGATTCCGACGTGCTTCCATCGGGGTTCCGTGTTCGAACGGCGGAGAGAGGGATGGTGAGTATGGGGTGGGCGCCGCAGATGGAGATTTTGGGGCATCCGGCGATCGGAGGGAGTTTTTTTCACGGAGGATGGGGATCGGCCATTGAAGCTCTGGAATTTGGAAGTTGTCTCATTCTGTTGCCGTTCATCGTTGATCAGCCGCTGAATGCGAGGCTTTTAGTGGAGAAGGGAGTTGCAATTGAAGTTGAAAGAAACGAAGATGATGGGTGTTTCAGTGGAGAAGCCATAGCCAAAGCTTTGAGAGAAGCCATGGTTTCAGAAGAAGGGGGGAAGATTAGGAAGCGAGCGAAAGAAGTTGCCGCTATTTTTGGGGACACTAAGCTTCATCAACGATATATTGAAGAATTTGTAGAATTCCTCAAACATAGGGATCCGATTCCAAATCAGTAG 3117 45.2 MACRRFAACSFQSFKPYTRISEYFDRVLRPNVVLNKRYYKDESHSFKRATVRGLHSPSYGTHRIDTFLPASSMKYWNTIPLTCFGNLSNYRNYSSASGRKADISGDTGVPAASSGVEPDISNSPDVGRDLLEKVKDVWQSAVDAASFTGQKAKEVSDELSPHVDKLLDSHPYLKNVIVPVSMTLGATLLAWLVMPRLLKRFHKYSMRSPVAIISGSLPSEEIPYEKSFWGALEDPLRYLVTFFAFSQIGVIVAPTAVAQEFVSQACRGAVILSLVWFIYRWKTNVLSRALATKTFAGLDRDRLLTLDKVSSVALFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNILSGLTMQFSQPFSLGDTIKAGAIEGQVVEMGLMTTSLLSAEKFPVVVPNSLFSSQVIINKSRAQWRAIVKRVPLQVDDISTVSQITDDIKNMLTSHPKVFLGKEAPYCFLSQIESTYAELTLGCNLKKMGKDESFSTEQDILLQSVQIIKAKAWNMFDRPRMPDRNVRTCCSAWVAGISVKPHKMENCFDMKIATGFAMVGTNRGDERVKMLLITMAENKGLHVVVFPWSAFGHLIPHFQLSIALAKAGVHVSFISTPKNLQRLPPIPPSLSSFITLVPIPLPKLPGDPLPEGAEATVDIPFDKIPFLKVALDLAEPPFRKFIADHVHPPDWFIVDFNVSWIGDIAREFRIPIVFFRVLSPGFLAFYAHLLGTRLPLTEIGSLISPPPIEGSTVAYRRHEAVGIRAGFFEKNDSGLSDYERVTKINTACRVIAVRSCYEFDVDYLKLYSNYCGKKVIPLGFLPPEKPPKTEFEANSPWKSTFEWLDQQNPKSVVFVGFGSECKLTKDQIHEIARGVELSELPFLWSLRKPDWVEDSDVLPSGFRVRTAERGMVSMGWAPQMEILGHPAIGGSFFHGGWGSAIEALEFGSCLILLPFIVDQPLNARLLVEKGVAIEVERNEDDGCFSGEAIAKALREAMVSEEGGKIRKRAKEVAAIFGDTKLHQRYIEEFVEFLKHRDPIPNQ* 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1021185 1026511 - Chy6G106840.1 Chy06g00156 227865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00156 1038 CDD GT1_Gtf-like 577 1019 IPR002213 GO:0008194
Chy06g00156 1038 Gene3D - 262 364 - -
Chy06g00156 1038 Gene3D - 366 414 IPR023408 -
Chy06g00156 1038 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 267 349 IPR011014 GO:0016020
Chy06g00156 1038 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 844 990 IPR002213 GO:0008194
Chy06g00156 1038 PANTHER GLYCOSYLTRANSFERASE 575 1030 - -
Chy06g00156 1038 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 574 1015 - -
Chy06g00156 1038 Pfam Mechanosensitive ion channel 308 505 IPR006685 GO:0016020|GO:0055085
Chy06g00156 1038 Gene3D Glycogen Phosphorylase B; 836 1014 - -
Chy06g00156 1038 SUPERFAMILY Sm-like ribonucleoproteins 350 415 IPR010920 -
Chy06g00156 1038 MobiDBLite consensus disorder prediction 98 119 - -
Chy06g00156 1038 PANTHER UDP-GLYCOSYLTRANSFERASE 91A1-LIKE 575 1030 - -
Chy06g00156 1038 Gene3D Glycogen Phosphorylase B; 568 835 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00156 Chy-Chr6:1021185 Chy06g01167 Chy-Chr6:10359210 3.82E-54 dispersed
Chy06g01600 Chy-Chr6:18425693 Chy06g00156 Chy-Chr6:1021185 1.60E-12 dispersed
Chy06g00156 Chy-Chr6:1021185 Chy04g00199 Chy-Chr4:1765724 2.26E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00156 K22047 - csv:101220483 985.711