Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g00167 | ATGGCGGTCGTGAGTGCTATGCAAGCAACTACTCCTCGAGTTGGTCCAATTAATTATGCCGAAGCTTCACCAATTATGATCAGCTCAAGCAGAGAAATTGTAGAAGAGCCTGTGGGAGCTATTAGTGAAGATATAATTTATGTTGCTGTTGGGAAAGATGTGAAAGAGTGCTTATCAGTTTTGAGATATGCACTAAATTCCTCACGTGGGAAGAAGATTTGCCTCCTTCATGTTCATGTACCTGCACAGATGATTCCATTAATGGGAACCAAGTTTCCCGCAAATTCATTGGAGAAAGAGGAGGTGAAAGCATATCACGAGTTTGAGAAGCAAAATTTGCCGAGGGTCATGAACGAGTATATTCTTTACTGTCTTCAAGAAGGGGTTCATGCTGACAAACTATGTGGTGAAGCCGAGTATATTGAAAAGGGAATAGTTGATATGATTTCCCTTCACAGGATCGATAAGCTTGTTATGGGAGCAGCTGTGGACAAGTGTTATTCAAGGAAAATGGTGGATTTGAAGTCTAAGAAAGCCATCTACGTACGTTCACAGGCACCGGCTTTCTGTCACATTGAGTTTATTTGCAAGGGTAACCGCATCTGCACCAGGGAGGGTATATCAGATGAAGCTCAAGTGGAAACCATCATCTCATCTCCACAAATAAGTCCAGACGCTGAATCCTCAGAAGTTACCCACCGGAGATCTCAGTCATTGCCACTGGGACAGGTTAATAGCAGGGAAGTGGGAAGCCCGTCTTCCAGTTTACGTCCTAAAAGGAGATCATTGCTTCTTGACCATTTTCGAGGGAACATACTCGATCCTTCTTCTCCAGATACTAGGAATGGGGTCCATGATGCAAAAAACTTGGATGTTGACGAGGCTATGGATGAATGGGGTTTATTAACAAGGAGAAGTCCTTCTGAAAGGTCAGAAAATTCCATACGCTCTCCTCGTGGTGTGATTGATATGGCTCCATCCCCATTTTTTAGGGTTGAATTATGTGCAAATGGGCTGGAGGATGGGAAAACCAGTGACAACCTTTACAATCAATGTGAGCGGGTGATGATGGAAGCTGCAAATGCAAGGCGTGAAGCATTTCTAGAGGCAATTGCACGTAGGAAATCCGAGAAAGAAACTGTTAACGCTCTACACAGGGTCAGAGCTGCAGAAGGGTTATATGCTGAAGAACTGAAACAAAGGAAGGAGGTTGAACAAGAGCTAGCGAAGGAAAAGGGAAAACTTGAAAGTATAAAGACACAATTGAATGAAGAGATGGAAATGCTCCGGATAGCCCAAGATGAGAAGGCAAGTCTAGAGAGAGATCTTTTAGAATCCGATCTAACCACAAAGGAGTTGGAGCAAAAGATTCTTTCTGCTGTTGAGTTGTTACAGAGTTACAAAAGAGAGCGAGAGGAGTTGCAAATTCATCGCGACAGTGCACTTAGAGAAGCAGAGGAGCTTAGAAAAAATCAATCCACAGGCCGAGACCTTACACAGTTCTTCACTGAGTTCCCTTTTCGGGAGATCGAGGAAGCAACTAAAAACTTTGATCCCTCCCTGAAGATTGGAGAAGGGGGATATGGAAGTATATTCCGAGCTAACTTGCGTCATACCATGGTGGCTATAAAAATCCTACATTCTGATAGCTCTCAAGGCCCCTCTGAATTTCAACAAGAGGTTAATGTATTGAGTAAGATGAGACATCCCAATCTTGTCACGCTCATTGGCGCCTGTCCGGAAGCTTGGGTTCTCATCTACGAATACCTCTGTAATGGAAGCCTCGAAGATAGGCTAAGCTGCAAGGATAATACTCCACCTTTATCTTGGCAAACACGAATACGCATTGCCACTGAGTTATGCTCAGCCCTTATGTTTCTTCACTCGAGTAAGCCCCACAGCATCATTCATGGTGACTTGAAACCTGCAAATCTATTACTTGATGCAAATTTTGTATGCAAGCTTGGTGACTTTGGAATTAGTCGCTTATTGTCTCGGGATGAAATGCTAAACAGCGAAACCCTTGTTTGGAGAACTGACAACCCCAAGGGGACTTTTGCTTACATGGATCCTGAGTTCCTTTCATCTGGAGAGCTAACAACAAAGTCAGATGTTTATTCATTTGGGATAATACTTTTGCGGTTATTGACCGGTAGGTCTGCAGTCAGGATAGCAAAGGAAGTGCAATATGCAATGGGAAATGGAAAGTTAGAATCCATTTTGGATCCTTTAGCAGGAGATTGGCCATTTGTGCAGGCCGAACAGCTCGCTCGATTGGCATTAAGGTGTTGTGATATGAAGCGAAAGAACCGCCCCGATCTCATTACTGATGTCTGGAGGGTGCTTGGACCAATGAGGGCTTCCTGTGGGGGCCGATTGTCCATCCAGCTTGGTTCTGCAGAACACTCTCAACCTCCCTCTTATTTTATCTGTCCCATCTTTCAGGAAATTATGCAAGATCCACATGTAGCTGCAGATGGTTATACATACGAAGCAGAGGCTATAAGAGGATGGCTAGACAGTGGACACGAAACTTCGCCAATGACGAATCTTAGGCTTGAGAACCGCAACCTCGTCCCAAACCGTGCTCTTCGTTCTGCCATCCAGGAGTGGCTCCATCATAACTGA | 2628 | 44.33 | MAVVSAMQATTPRVGPINYAEASPIMISSSREIVEEPVGAISEDIIYVAVGKDVKECLSVLRYALNSSRGKKICLLHVHVPAQMIPLMGTKFPANSLEKEEVKAYHEFEKQNLPRVMNEYILYCLQEGVHADKLCGEAEYIEKGIVDMISLHRIDKLVMGAAVDKCYSRKMVDLKSKKAIYVRSQAPAFCHIEFICKGNRICTREGISDEAQVETIISSPQISPDAESSEVTHRRSQSLPLGQVNSREVGSPSSSLRPKRRSLLLDHFRGNILDPSSPDTRNGVHDAKNLDVDEAMDEWGLLTRRSPSERSENSIRSPRGVIDMAPSPFFRVELCANGLEDGKTSDNLYNQCERVMMEAANARREAFLEAIARRKSEKETVNALHRVRAAEGLYAEELKQRKEVEQELAKEKGKLESIKTQLNEEMEMLRIAQDEKASLERDLLESDLTTKELEQKILSAVELLQSYKREREELQIHRDSALREAEELRKNQSTGRDLTQFFTEFPFREIEEATKNFDPSLKIGEGGYGSIFRANLRHTMVAIKILHSDSSQGPSEFQQEVNVLSKMRHPNLVTLIGACPEAWVLIYEYLCNGSLEDRLSCKDNTPPLSWQTRIRIATELCSALMFLHSSKPHSIIHGDLKPANLLLDANFVCKLGDFGISRLLSRDEMLNSETLVWRTDNPKGTFAYMDPEFLSSGELTTKSDVYSFGIILLRLLTGRSAVRIAKEVQYAMGNGKLESILDPLAGDWPFVQAEQLARLALRCCDMKRKNRPDLITDVWRVLGPMRASCGGRLSIQLGSAEHSQPPSYFICPIFQEIMQDPHVAADGYTYEAEAIRGWLDSGHETSPMTNLRLENRNLVPNRALRSAIQEWLHHN* | 876 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1087735 | 1092668 | - | Chy6G106950.1 | Chy06g00167 | 227876 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g00167 | 875 | Gene3D | Transferase(Phosphotransferase) domain 1 | 590 | 790 | - | - | |
Chy06g00167 | 875 | SMART | Ubox_2 | 808 | 871 | IPR003613 | GO:0004842|GO:0016567 | |
Chy06g00167 | 875 | ProSiteProfiles | U-box domain profile. | 804 | 875 | IPR003613 | GO:0004842|GO:0016567 | |
Chy06g00167 | 875 | CDD | RING-Ubox_WDSUB1_like | 809 | 850 | - | - | |
Chy06g00167 | 875 | Coils | Coil | 345 | 365 | - | - | |
Chy06g00167 | 875 | ProSiteProfiles | Protein kinase domain profile. | 517 | 786 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy06g00167 | 875 | Gene3D | Phosphorylase Kinase; domain 1 | 496 | 589 | - | - | |
Chy06g00167 | 875 | Coils | Coil | 387 | 442 | - | - | |
Chy06g00167 | 875 | CDD | STK_N | 45 | 198 | - | - | |
Chy06g00167 | 875 | SUPERFAMILY | Protein kinase-like (PK-like) | 495 | 774 | IPR011009 | - | |
Chy06g00167 | 875 | Coils | Coil | 450 | 491 | - | - | |
Chy06g00167 | 875 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 803 | 875 | IPR013083 | - | |
Chy06g00167 | 875 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 635 | 647 | IPR008271 | GO:0004672|GO:0006468 | |
Chy06g00167 | 875 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 33 | 41 | 871 | - | - | |
Chy06g00167 | 875 | SMART | serkin_6 | 517 | 782 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy06g00167 | 875 | Pfam | U-box domain | 806 | 874 | IPR003613 | GO:0004842|GO:0016567 | |
Chy06g00167 | 875 | ProSitePatterns | Protein kinases ATP-binding region signature. | 523 | 544 | IPR017441 | GO:0005524 | |
Chy06g00167 | 875 | Pfam | Protein kinase domain | 522 | 772 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy06g00167 | 875 | MobiDBLite | consensus disorder prediction | 217 | 258 | - | - | |
Chy06g00167 | 875 | SUPERFAMILY | RING/U-box | 800 | 873 | - | - | |
Chy06g00167 | 875 | PANTHER | OS02G0152300 PROTEIN | 41 | 871 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy06g00167 | Chy11g01644 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00167 | Chy-Chr6:1087735 | Chy11g01234 | Chy-Chr11:18463723 | 3.18E-28 | dispersed | |
Chy02g00474 | Chy-Chr2:2922348 | Chy06g00167 | Chy-Chr6:1087735 | 8.78E-13 | transposed | |
Chy02g00762 | Chy-Chr2:4717292 | Chy06g00167 | Chy-Chr6:1087735 | 3.38E-84 | transposed | |
Chy09g01031 | Chy-Chr9:12833155 | Chy06g00167 | Chy-Chr6:1087735 | 5.57E-120 | transposed | |
Chy11g01809 | Chy-Chr11:24432506 | Chy06g00167 | Chy-Chr6:1087735 | 4.50E-13 | transposed | |
Chy11g01644 | Chy-Chr11:22933805 | Chy06g00167 | Chy-Chr6:1087735 | 0 | wgd | |
Chy06g00167 | Chy-Chr6:1087735 | Chy06g00955 | Chy-Chr6:7021445 | 1.18E-28 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71303 | PF00069 | Pkinase | 9.40E-42 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g00167 | - | - | csv:101211387 | 1697.18 |