Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00189 ATGGATTTATCTTGTAGTACTTGGAAGCAAAATGTGTTACGTGGTAGTGAAAGAACATATTGCAAGACGTTGGACCAGTTTGGTCCCAGCAGTGTGCTTAGAAATAGAATTTTTGATGCTAAGTTGACTGGTGGTTCAAGATTGAGTTATAAAGTGCCTAAGAAGAGAAACAGAATTGAAGCTTCTAGTGATTCCAATCATCTGAGTCTGGTTTGTGCCACCAAGTTCGACAGGGCTTTGCAAATTTTTACGCACAAAAGATTTTTGACCTGGAACAATAAGATAAGTGGACGGGGGATGCGTATGGTTCATTTAGAGTGTCAAAACAATGATTCTTTAGCATTTATTGATGGAAATGGCAGAAATATTGAATATGTAAATTCTGGTGATGAGGGGTCCAGTTCTGGGCCTACTGATGGTGTAGGGTCAGCTGGTTCCAGAGAAGTGGGTGGAGAAGCAGAAATAGTTGAAACAAACATACCAACTGTTGATGAGCTCAGAGAATTGCTGCAAAAGGCCATGAAAGAACTGGAAGTTGCGAGACTTAACAGCACAATGTTTGAGGAGAGAGCCCAAAAAATTTCAGAAGCAGCAATAGCTTTGCAAGATGAAGCAACCATTGCTTGGAATGATGTGAACTCTACTCTTGATTCTGTACAACTGATAGTGAACGAAGAATATGCTGCCAAAGAAGCGGTTCAAAAGGCAACCATGGCTCTTTCATTAGCAGAGGCAAGGCTTCAGGTGGCAATCGAGTCACTGGAGCTGGCAAAAAGAGGAAGCGATTTTCCAGAAACATCAATGGATATTGATGGGGTGATTGATGGCAACGAAGATCAAGAATCATTGTTAGTTGCTCAAGAGGACATCACAGAATGCCGAGCAAATTTAGAAATCTGTAATGCAGAATTGAAGCGCTTACAGAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACAAGTTGAACGAGTTAGCTGAAAAAGCACAATTGAATGCATTGAAAGCTGAAGAAGATGTAGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTCGAGGCTGCCCAAAGGGTCAATGATGCTGAAAGAGCATTACAGAAAATGGAGAAATCTTTATCAAGTTCTTTTGTTGACACTTCAGACACCACTCAGGGGTCAAATGTAATTGAAGAAGTTGAGAACGAGGATAACAAGGCAGTTCTAGAATTCTCTGGTGATAATGCTGTTGAAATGGATAGAGAGTTGCCACTTAATGGTGATTCCTTAGCAATCAAGTCTCTGCCAGGTAGCCTTTCAGATTCTGAAGGCTCTGATCAACCATATTACTTAAGCGACAGCGAGATTGGAAAATTAAGTTCAGACTCTGCAAAGGAGGTTGAATCTGGAGCAGAGAAGTCTATTTTGAGTCAAACAAAAAAGCAGGAAACACAGAAGGATTTGACAAGAGAAGGCTCACCTTTAAACTCCCCCAAGGCTCTATTGAAAAAGTCTTCTCGCTTTTTTTCAGCATCATTCTTTTCGTTTACAGTTGATGGGACAGAGTTCACTCCAGCATTAGTTTTCCAGGGTCTCCTGGATTCCACCAAAAAGCAATTGCCGAAGCTAATTGTTGGAGCAGTACTATTAGGAGCAGGGATTGCTATCTTTGCAAATCGACCAGACAGGAGTTCTCAGATGATTCTGCAGCCTGATGTTGTCACTATTAGCACCGATGATGTTTCCTTGGACACAAAGCCCTTATTTCAACAATTGAGGAAACTTCCTAAAAGAGTGAAGAAGTTAATTTCACAGATTCCCCATCAAGAGGTGAATGAAGAGGAGGCTTCACTGTTAGACATGTTATGGCTGTTGCTTGCCAGTGTCATATTTGTGCCAACATTTCAGAAACTTCCTGGAGGAAGTCCTGTCCTTGGGTACTTGGCTGCTGGTATTTTAATTGGGCCATATGGTCTCTCCATAATCCGTCATGTGCATGGAACCAAAGCAATTGCTGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGACTGGAGTTATCAGTTGAGAGGCTAAGTTCCATGAAGAAATATGTTTTTGGGTTAGGGTCTGCACAGGTTTTGGTTACAGCTGTAGTGGTTGGCCTGGTAGCTCACATGGTCTGTGGCCAGGCTGGCCCAGCTGCTATTGTCATTGGAAATGGATTGGCTTTGTCATCCACTGCTGTTGTCCTTCAGGTGTTGCAAGAGCGAGGTGAGAGTACTTCACGACATGGGCGTGCCACATTTTCTGTCTTACTATTCCAGGATTTGGCTGTTGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCTAATTCATCCAAAGGAGGGATTGGTTTTCAAGCCATCGCCGAAGCTCTTGGCCTGGCTGCTGTTAAGGCAATTGTTGCCATTTCTGCCATAATAGCTGGTGGGCGTCTGCTACTACGACCAATTTATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCTGCCAACACACTACTTGTCATTCTGGGAACTAGTCTACTTACTGCCAGGGCCGGACTATCAATGGCGCTGGGTGCTTTTCTAGCAGGTTTACTTCTAGCAGAAACAGAATTCTCCTTGCAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTGTTGGGTCTCTTCTTCATGACGGTCGGGATGTCTATCGATCCAAAACTTCTTTTTTCTAACTTTCCAGTTATCATGGGGTCTTTGGGACTTCTTATTGGTGGCAAGACTATATTGGTTGCGCTGGTTGGTAGATTTTTTGGTATCTCAATCATATCTGCGATAAGAGTTGGGTTACTTCTTGCTCCTGGTGGAGAATTTGCTTTTGTGGCATTTGGTGAAGCTGTCAATCAGGGTATAATGTCTTCTCAACTATCCTCTTTACTGTTTCTTGTTGTGGGAATTTCAATGGCCCTTACACCATGGCTGGCTGCTGGTGGTCAGTTAATTGCTTCCCGGTTTGAGCAGCATGATGTTCGGAGTTTATTGCCTGTTGAAAGTGAGACAGATGATTTACAAGATCATATTATTATTTGTGGATTTGGACGAGTTGGTCAGATAATAGCCCAGCTTCTGTCAGAGCGACTGATTCCCTTTGTTGCCCTTGATGTGAGGAGTGATAGAGTGGCCGTAGGACGTGCCTTAGACCTTCCGGTGTATTTTGGAGATGCAGGAAGTCGAGAGGTTTTACACAAAGTCGGTGCTGAAAGGGCGTGTGCTGCTGCAATAACACTGGATACACCGGGTGCAAATTACAGAACTGTTTGGGCTCTGAGCAAATATTTCCCTAACGTTAAGACTTTTGTTCGAGCTCATGATGTTGATCACGGTCTTAATTTAGAGAAGGCTGGTGCTACTGCGGTAGTTCCCGAGACGTTGGAACCGAGTTTACAGTTGGCTGCCGCTGTTCTTGCTCAGGCTAAACTACCCATGTCAGAAATTGCTGCAACAATTAATGAGTTTAGGTCCCGACATTTATCCGAGCTTACCGAGCTATGTGAAGCCAGTGGAAGTTCGCTCGGATACGGGTTTTCTCGAATCATGAGTAAACCAAAAATCCAAACCTCTGATTCTTCAGATGAGAATCAAGTCACTGAAGGAACACTGGCCATATGA 3651 42.97 MDLSCSTWKQNVLRGSERTYCKTLDQFGPSSVLRNRIFDAKLTGGSRLSYKVPKKRNRIEASSDSNHLSLVCATKFDRALQIFTHKRFLTWNNKISGRGMRMVHLECQNNDSLAFIDGNGRNIEYVNSGDEGSSSGPTDGVGSAGSREVGGEAEIVETNIPTVDELRELLQKAMKELEVARLNSTMFEERAQKISEAAIALQDEATIAWNDVNSTLDSVQLIVNEEYAAKEAVQKATMALSLAEARLQVAIESLELAKRGSDFPETSMDIDGVIDGNEDQESLLVAQEDITECRANLEICNAELKRLQSKKEELQKEVDKLNELAEKAQLNALKAEEDVANIMLLAEQAVAFELEAAQRVNDAERALQKMEKSLSSSFVDTSDTTQGSNVIEEVENEDNKAVLEFSGDNAVEMDRELPLNGDSLAIKSLPGSLSDSEGSDQPYYLSDSEIGKLSSDSAKEVESGAEKSILSQTKKQETQKDLTREGSPLNSPKALLKKSSRFFSASFFSFTVDGTEFTPALVFQGLLDSTKKQLPKLIVGAVLLGAGIAIFANRPDRSSQMILQPDVVTISTDDVSLDTKPLFQQLRKLPKRVKKLISQIPHQEVNEEEASLLDMLWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHMVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAIVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLFSNFPVIMGSLGLLIGGKTILVALVGRFFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPMSEIAATINEFRSRHLSELTELCEASGSSLGYGFSRIMSKPKIQTSDSSDENQVTEGTLAI* 1217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1238433 1250475 + Chy6G107170.1 Chy06g00189 227898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00189 1216 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 619 899 IPR004771 GO:0006812|GO:0008324|GO:0016021
Chy06g00189 1216 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1216 - -
Chy06g00189 1216 MobiDBLite consensus disorder prediction 126 141 - -
Chy06g00189 1216 Pfam Sodium/hydrogen exchanger family 618 988 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Chy06g00189 1216 ProSiteProfiles RCK N-terminal domain profile. 1020 1142 IPR003148 GO:0006813
Chy06g00189 1216 MobiDBLite consensus disorder prediction 126 151 - -
Chy06g00189 1216 Coils Coil 163 183 - -
Chy06g00189 1216 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1216 - -
Chy06g00189 1216 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1017 1159 IPR036291 -
Chy06g00189 1216 Coils Coil 290 338 - -
Chy06g00189 1216 MobiDBLite consensus disorder prediction 373 392 - -
Chy06g00189 1216 Coils Coil 353 373 - -
Chy06g00189 1216 MobiDBLite consensus disorder prediction 455 490 - -
Chy06g00189 1216 Gene3D - 1016 1180 - -
Chy06g00189 1216 Gene3D - 608 996 IPR038770 -
Chy06g00189 1216 Pfam TrkA-N domain 1021 1134 IPR003148 GO:0006813
Chy06g00189 1216 MobiDBLite consensus disorder prediction 373 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01644 Chy-Chr3:18293432 Chy06g00189 Chy-Chr6:1238433 5.73E-33 dispersed
Chy06g00189 Chy-Chr6:1238433 Chy06g00880 Chy-Chr6:6348128 9.74E-42 dispersed
Chy06g00189 Chy-Chr6:1238433 Chy01g00181 Chy-Chr1:1221375 9.64E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00189 - - csv:101213081 2189.85