Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00227 ATGGAACTGATCAATTTCAATATCATCACCTTCTTCTCCATCCTTCTCTGCCTCTTCCTCCTCTCCTTCTTCATTCTCCTCCTCAAAACCCTATCCGGAAAGTCCATAACCAACTCCGACTACTCACCGGTGTACGGCACCATATACGGTCAGGCTTTCTACTTCAACAACCTGTACGATCATCTGACGGCGGTGGCGAAGCGGCACAGAACCTTCCGACTGATCGGAGCGTCGTACAGCGAGATTTATACAGTGGATCCGAGAAACATCGAGCATATATTGAAGACGAAATTCGAGAAGTATATGAAAGGAAGTAAGGATCAAGAACTGGGTGGGGATTTGTTCGGAGAAGGAATATTTGTGGTGGATGGAGAAAAGTGGAAAGAGCAGAGGAAATTGGGTAGCTATGAATTCTCGACGAAGATTCTTAGGGATTTTAGCTGCTCTGTTTTTAGAAGAAATGCCGAAAAGCTCGTCGGAATTCTTTCGGAGTTCCCCACCATGGCGCGAGTCTTCGATGTGCAGGATCTTCTAATGCGATGCTCTTTGGACTCCATTTTCAAAGTTGGGTTCGGCGTCGATTTGAACTGCGTGGAGGAACCAAGCAAAGCTGCAGGCAGGCGCGGGTTCATGGAGGCTTTCGATAATGCAAGCGCTCAGGTTTTTTGGCGCTTCATCGATCCTTTCTGGAAATTGAAAAGATTTCTCAACATCGGTTCCGAAGCTTCGTTTAGGAACAACCTCAAAATAATTGATGCTTTTGTGCACCAGTTGATCAGTGCTAGGAGAAAATTGCTTCACCAACCAAATCTCAAGATTGACAAAGAGGACATACTTTCGAGGTTTCTGATGGAAAGTGAGAAGGATCCAACAAGAATGAATGATCAATATCTAAGAGATATAGTCCTGAATTTCATGTTGGCGGGCAGGGATACAAGTGCTGGAACTCTATCTTGGTTCTTCTATATGCTATGCAAGAACCCTTTAATACAGGAAAAAGTTGCAGAAGAAGTGAGCCAAATTGTTGGGGTTCAAGGGGAAGAAACTGACATACATTCGTTCATACAAAACTTAACTGATTCAGCTCTTGATAAAATGCACTATCTTCATGCAGCATTGACAGAGACTCTAAGGCTCTATCCTGCAGTCCCTGTTGATGGAAGGACTGCAGAAATAGACGACATTCTTCCTGATGGCTATAAACTAAGAAAAGGGGATGGAGTATACTACTTGGCCTATTCCATGGGCAGAATGCCTTGCCTTTGGGGAGAAGATGCTGAAGACTTTAAACCTGATAGATGGCTTGAAAATGGAACTTTTCGACCCGAATCACCTTTCAAATTCATCGCATTTCATGCGGGTCCTCGAATGTGTTTGGGGAAGGACTTTGCTTATCGACAAATGAAGATAGTATCCGCTGCACTGCTTCGATTTTTTCGATTCAAGCTAGCCGATCCAACGAGGAATGTAACTTATAGGATCATGCTTACCCTTCACATAGATGGAGGTCTCCCGCTTCTTGCACTCCCGAGAGTAAGAGAGACACAGTACAAGAAATTCAAATTCATTCAACGTTCCCATTTCCCTCGCATTGCTCCGTCTTCAGATTTCTTGCAACCGGAGTTCGACGGTGGCGATCCGATGAAATATTCGGCGAAGAACAATAACGAATCTCCAAAGCGGCAATGGTCCTTGAAAGATTTCGACGTAGGAAAACCCCTCGGCAAAGGAAAATTCGGCAGGGTTTATCTAGCTAGAGAAGTCAGGAGCAAGTATATAGTAGCACTGAAGGTGATTTTTAGGGAGCAGATGAAGAAGTACGGGATTCATCGTCAGTTAATGAGAGAGATGGAGATCCAGACCAGTCTTCGGCACCCCAACATCCTACGTCTCTATGGATGGTTTCATGATGCCGAACGGATTTTCATGATATTGGAATACGCTCACCGCGGTGAGCTTTATAGGGAACTTAGGAAAAATGGTCATCTCAGCGAGAAGCAAGCGGCCACTTACATGTTAAGCCTCACACAAGCATTGGCATACTGCCATGAGAAGGATGTAATTCACAGGGACATTAAGCCAGAAAATTTGCTGCTTGATCACGAGGGCCGGTTGAAAATTGGAGATTTTGGATGGGCTGTACAGTCAAGAAGCAAGAGATTTACCATGTGTGGAACTCTGGATTATTTAGCCCCAGAAATGGTGGAGAATAAAGGTCATGACTTTGCAATAGATAATTGGACGATGGGCATCCTTTGCTATGAATTCCTTTATGGAGCCCCTCCATTTGAAGCTGAGAGTCAAAGTGACACGTTTAAAAGGATAAGGAAGGTTGAATTAAATTTTCCTTCGACTCCTCATATTTCTACAGAAGCAAAGGATCTAATAGGCCGGCTCTTGGTGAAGGATTCGTCTAATAGACTTTCACTTCAGGAGATAAAGGAGCATCCATGGATAATTAAGAATGCAGATCCATCTGGTATTTGCAATACCAGGTAG 2499 44.06 MELINFNIITFFSILLCLFLLSFFILLLKTLSGKSITNSDYSPVYGTIYGQAFYFNNLYDHLTAVAKRHRTFRLIGASYSEIYTVDPRNIEHILKTKFEKYMKGSKDQELGGDLFGEGIFVVDGEKWKEQRKLGSYEFSTKILRDFSCSVFRRNAEKLVGILSEFPTMARVFDVQDLLMRCSLDSIFKVGFGVDLNCVEEPSKAAGRRGFMEAFDNASAQVFWRFIDPFWKLKRFLNIGSEASFRNNLKIIDAFVHQLISARRKLLHQPNLKIDKEDILSRFLMESEKDPTRMNDQYLRDIVLNFMLAGRDTSAGTLSWFFYMLCKNPLIQEKVAEEVSQIVGVQGEETDIHSFIQNLTDSALDKMHYLHAALTETLRLYPAVPVDGRTAEIDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPDRWLENGTFRPESPFKFIAFHAGPRMCLGKDFAYRQMKIVSAALLRFFRFKLADPTRNVTYRIMLTLHIDGGLPLLALPRVRETQYKKFKFIQRSHFPRIAPSSDFLQPEFDGGDPMKYSAKNNNESPKRQWSLKDFDVGKPLGKGKFGRVYLAREVRSKYIVALKVIFREQMKKYGIHRQLMREMEIQTSLRHPNILRLYGWFHDAERIFMILEYAHRGELYRELRKNGHLSEKQAATYMLSLTQALAYCHEKDVIHRDIKPENLLLDHEGRLKIGDFGWAVQSRSKRFTMCGTLDYLAPEMVENKGHDFAIDNWTMGILCYEFLYGAPPFEAESQSDTFKRIRKVELNFPSTPHISTEAKDLIGRLLVKDSSNRLSLQEIKEHPWIIKNADPSGICNTR* 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1485687 1493438 + Chy6G107550.1 Chy06g00227 227936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00227 832 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 6 513 - -
Chy06g00227 832 Gene3D Transferase(Phosphotransferase) domain 1 652 828 - -
Chy06g00227 832 SUPERFAMILY Cytochrome P450 43 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 SMART serkin_6 568 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00227 832 Pfam Cytochrome P450 55 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Chy06g00227 832 PANTHER CYTOCHROME P450 6 513 - -
Chy06g00227 832 CDD STKc_Aurora 567 819 - -
Chy06g00227 832 Gene3D Phosphorylase Kinase; domain 1 556 651 - -
Chy06g00227 832 Pfam Protein kinase domain 569 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00227 832 ProSiteProfiles Protein kinase domain profile. 568 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00227 832 Gene3D Cytochrome P450 42 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 SUPERFAMILY Protein kinase-like (PK-like) 557 823 IPR011009 -
Chy06g00227 832 ProSitePatterns Protein kinases ATP-binding region signature. 574 597 IPR017441 GO:0005524
Chy06g00227 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Chy06g00227 832 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g00227 832 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00166 Chy-Chr4:1462430 Chy06g00227 Chy-Chr6:1485687 2.14E-124 dispersed
Chy06g00227 Chy-Chr6:1485687 Chy01g01820 Chy-Chr1:23717694 2.99E-106 dispersed
Chy06g00223 Chy-Chr6:1444221 Chy06g00227 Chy-Chr6:1485687 5.23E-168 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71304 PF00067 p450 1.10E-72 No_clan Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00227 - - csv:101210732 987.638