Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00229 ATGATTTTATTTCTGTTTATCTCAGTTTCTCGAGGAAATCGGCCTAAGGCCATGGAGACCATTCCCGCCGCCTCCGCCGTCGTCGTTAGCAATACCCCACCCATCCCGCCTGAGAAACGTAACCGTTCCATCTTCGACGTTCCGGCCGACTTCTTCGATTCCTGCAAACTCCTTCGTTCTCCACACTCATACACATCACCAACCAGCGGCAGCAACAGGGACAGCCCAAGCGCTGTAAACACAGTCGATTTGGAGCAGAACTCTAGGGATTTCAAAGAAAGTTCCGTCGCCCACCGGTGGACCTGCAACATATGCAAGGCCGAGTTCGAGTCCCTCCTTGACCAGCGTGCGCACTTCAAATCCGACATTCACCGGTTCAATGTGAAACTAAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTTTGATGTGTCAAGTATTTCTGGATCAGAGGACGAAACGGAGAAAGAGAGAAATTCTCGGAACGAAGGGTCTAAGGGTATTAGTGATAATGTGAACAAGAAGAGGTTGTTTGTTCATCTTCGAACAGGCGAAAGAGCTTCGATATGGAAGTGTCTGATCATAAACGAGTCAGACAATATTTTGTATGAAGAAGATAAAACATCAGCCAGTGGTAATGGCGTTCATGCACAGTGCCTCAGAGAGAGTGATGTTATAGCAAGATTAAAATATTTAAACCATGAACCAAGAGATGGCTCCCACTTTCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTTGCGGGTTGTGTATTTGATGGGAACTCGGTTGTAGCTCATAAAACCTTTCACAGATACGTGGTGAGAGCCAAGTCTGGAAAGAAACAGTCATCAAAAGATGCAAGTGGCAAATCAATCAGTTCTGCGGGGGCTTCACTTCGTCGTCATAATGAGCTGGCATTGAAGAAGGAAATTCAAGATCTCCTTGCTGCTTGGAAGTCCTACTTTAATGCTTCATCTTGCGTTTATATTTATGCTCCTTCAAACAATCGACAATTGCTTTTTAATGGAGATAAGCCATACTTCAGTGATCAGCACTCTGCCGTGCGGAATATTCCTTTGACTGTTCGAAGGCCTACATTGAAAGAAGCTCGGCGTATTTATGAACAATTGGTGCAAGTAGTGTATGAAGTAGATGAGAAGGAAATATTGTCCACCAGTGAGCACGATGCACTGTTGAGTGCGACTGCAGATATAGCAGAAAAGGGCACCCAAGATATAAGTGGTCAGCAAGTCATTGGAGATTTGGAAAAGGATGCTTGTACTCATCTTGAAGAATCTGTTGAATACCCCAAAACTAGTGAGAGTGAAAGTGAAGTTATTTGTAGAACTACACCTTTGCATGAATCATCACAGTCTGGAAATGCAGATAGGGTTTTGGAACTGCTTGAACAGGGTTTTGATCCTTGCATCAAAGACGAAAGAGGACGTACTCCTTACATGCTAGCAAGTGAGAAGGAAGTCCGGAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGACTGGGATGCTGCTAAGGTGCCCAGTGCATTAACCAAGGATATGGAGGAATCTCAAGCAGCTAAGCAGGCTGAAAAAGATGCCAAACGAAAGGCAAGAGCAAAGGAGTTGAAAAAATTAAAGAAAGAAAAGGCCAAAAAAGCACAGGCCCAGGATGCTGAAGCTCAAAAAGCTGTGAAGACGGAACAGAGTAGAGGAGTCGGCTCTATTTTGAATTCTCGGGCTGACTCAACTAGTGGAAAACTGATTACCAAAGAGATGGCGCTGGCTTCTGAACGGGAAAAGAGAGCCGCAGCTGCTGAGAGAAGAATGGCAGCCATGGCTGCAGCTGCAGCCACCAACAATTCCTCGTCAACTACTTCTAGCAGCTCGCAGACTAAAAACGGATCAACAGGGGATGCCAACTGCTCTTGCTGCGGTACTTCGATGGCCGGTAAAGTTCCTTTCCACCGGTACAACTACAAATATTGCAGCTCGACTTGCATGCATGTACACAAAGAGAACTTTTTGGCATTGTGTGCAAGTGGTTACTATGACGGAACCATATTCCATCGCAATATCAAAGGTTTTATGATACAAGGTGGAGACCCAACCGGCACAGGAAAAGGAGGAACTAGCATATGGGGCAAGAAGTTTAATGACGAGATAAAAGAGTCACTCAAGCACAATGCTAGAGGGATATTATCAATGGCCAACAGTGGAGCAAATACAAACGGAAGCCAATTTTTTATAACGTATGCAAAGCAGCCGCATTTAAATGGATTATATACTGTTTTCGGCAGAGTGATTCATGGGTTTGAAGTCCTTGATATCATGGAAAAGACACAAACTGGACCAGGAGATCGTCCTCTCGCAGAGATCAGGCTGAATCGGGTGACGATACATGCTAATCCTCTTGCAGGCTAA 2469 44.84 MILFLFISVSRGNRPKAMETIPAASAVVVSNTPPIPPEKRNRSIFDVPADFFDSCKLLRSPHSYTSPTSGSNRDSPSAVNTVDLEQNSRDFKESSVAHRWTCNICKAEFESLLDQRAHFKSDIHRFNVKLSIAGKNIVKEDDFDELTSDSFRDFDVSSISGSEDETEKERNSRNEGSKGISDNVNKKRLFVHLRTGERASIWKCLIINESDNILYEEDKTSASGNGVHAQCLRESDVIARLKYLNHEPRDGSHFRIVLLASGGHFAGCVFDGNSVVAHKTFHRYVVRAKSGKKQSSKDASGKSISSAGASLRRHNELALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQHSAVRNIPLTVRRPTLKEARRIYEQLVQVVYEVDEKEILSTSEHDALLSATADIAEKGTQDISGQQVIGDLEKDACTHLEESVEYPKTSESESEVICRTTPLHESSQSGNADRVLELLEQGFDPCIKDERGRTPYMLASEKEVRNNFRRFMASNLDKWDWDAAKVPSALTKDMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAQDAEAQKAVKTEQSRGVGSILNSRADSTSGKLITKEMALASEREKRAAAAERRMAAMAAAAATNNSSSTTSSSSQTKNGSTGDANCSCCGTSMAGKVPFHRYNYKYCSSTCMHVHKENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIKESLKHNARGILSMANSGANTNGSQFFITYAKQPHLNGLYTVFGRVIHGFEVLDIMEKTQTGPGDRPLAEIRLNRVTIHANPLAG* 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1498008 1509803 + Chy6G107570.1 Chy06g00229 227938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00229 822 MobiDBLite consensus disorder prediction 534 594 - -
Chy06g00229 822 SUPERFAMILY Cyclophilin-like 686 819 IPR029000 -
Chy06g00229 822 MobiDBLite consensus disorder prediction 539 553 - -
Chy06g00229 822 MobiDBLite consensus disorder prediction 158 180 - -
Chy06g00229 822 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 686 814 IPR002130 GO:0000413|GO:0003755
Chy06g00229 822 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 762 774 IPR002130 GO:0000413|GO:0003755
Chy06g00229 822 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 747 762 IPR002130 GO:0000413|GO:0003755
Chy06g00229 822 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 775 790 IPR002130 GO:0000413|GO:0003755
Chy06g00229 822 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 704 716 IPR002130 GO:0000413|GO:0003755
Chy06g00229 822 Gene3D - 407 582 IPR036770 -
Chy06g00229 822 MobiDBLite consensus disorder prediction 631 654 - -
Chy06g00229 822 Coils Coil 536 575 - -
Chy06g00229 822 Pfam Bacteroidetes VLRF1 release factor 256 392 IPR041175 -
Chy06g00229 822 ProSitePatterns Zinc finger C2H2 type domain signature. 102 124 IPR013087 -
Chy06g00229 822 ProSiteProfiles Ankyrin repeat profile. 460 492 IPR002110 GO:0005515
Chy06g00229 822 Pfam Vms1-associating treble clef domain 656 688 IPR041540 -
Chy06g00229 822 MobiDBLite consensus disorder prediction 157 180 - -
Chy06g00229 822 MobiDBLite consensus disorder prediction 627 654 - -
Chy06g00229 822 Gene3D - 681 822 IPR029000 -
Chy06g00229 822 CDD Cyclophilin_PPIL3_like 678 815 - -
Chy06g00229 822 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 688 815 IPR002130 GO:0000413|GO:0003755
Chy06g00229 822 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 38 688 - -
Chy06g00229 822 SUPERFAMILY Ankyrin repeat 462 514 IPR036770 -
Chy06g00229 822 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 699 716 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00840 Chy-Chr2:5339778 Chy06g00229 Chy-Chr6:1498008 1.23E-47 dispersed
Chy06g00229 Chy-Chr6:1498008 Chy12g00717 Chy-Chr12:10735717 5.16E-39 dispersed
Chy06g00229 Chy-Chr6:1498008 Chy11g00439 Chy-Chr11:4303231 1.10E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00229 K26089 - csv:101216211 1160.98