Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00237 ATGAGCTCGAGGCGGAGTGGTGGAAGTTGCACAAAAGGCAAGGGTGGTGGCAGCAACGGCAGTGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAGTGTATGCCAGAGTGTATATTTGCACCCTACTTTGACTCCGAACAAGGTTCAACTCATTTTGCAGCTGTGCACAAGGTGTTTGGAGCAAGCAATGTGTCAAAGATGCTTCTACATATTCCTGAACATAAACGGCTTGATGCAGCTATAACTATATGTTACGAGGCACAAGCTCGAGTCAGAGAGCCAGTTTTGGGCTGTGTTTCTCATATCTTTGCCCTTCAACAACAGGCTGCAAGGTTGCAAATAGAGATCTCATATTTGCAAGCGTACCTAGCAACATCTGAGCTTCCAAGACCCGCACCCCATCTTCAGGCACAACCACCAGCTCTGGTCAAGAAGCCAACTCTATCCTCAATTGTAAGCCTTCCATCAGATTGCCCTTCTTTTCCTGCTGAATCAGATCTTTCTCTACTTTTCGATCCTGTCGAGCAAGTTTCACAGGAAAAATTGCAGTCTCCATTGGAAACATACCAAATTGGAAGCAGCAATTTCCCATCCATGGGCAGCATTGATCAACAAGTTGTCCAAAAACAACTGTCTTCGATGCAACACATTGGTGCCTCTCTATTTCCAAACATCCCTAAACGAGCTTAA 696 46.55 MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQIEISYLQAYLATSELPRPAPHLQAQPPALVKKPTLSSIVSLPSDCPSFPAESDLSLLFDPVEQVSQEKLQSPLETYQIGSSNFPSMGSIDQQVVQKQLSSMQHIGASLFPNIPKRA* 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1572197 1573152 - Chy6G107650.1 Chy06g00237 227946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00237 231 MobiDBLite consensus disorder prediction 1 16 - -
Chy06g00237 231 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
Chy06g00237 231 MobiDBLite consensus disorder prediction 1 22 - -
Chy06g00237 231 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Chy06g00237 231 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 205 - -
Chy06g00237 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 205 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00237 Chy11g01986 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01052 Chy-Chr4:15572778 Chy06g00237 Chy-Chr6:1572197 1.52E-46 dispersed
Chy06g00237 Chy-Chr6:1572197 Chy11g01987 Chy-Chr11:25787609 5.49E-62 dispersed
Chy01g01472 Chy-Chr1:20462152 Chy06g00237 Chy-Chr6:1572197 1.56E-43 transposed
Chy04g01614 Chy-Chr4:22594907 Chy06g00237 Chy-Chr6:1572197 1.45E-47 transposed
Chy10g00526 Chy-Chr10:11828124 Chy06g00237 Chy-Chr6:1572197 8.08E-43 transposed
Chy11g01986 Chy-Chr11:25775513 Chy06g00237 Chy-Chr6:1572197 1.09E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18081 PF03195 LOB 1.70E-36 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00237 K21994 - csv:101216934 414.075