Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00267 ATGCTCTCTTCACATCTAATACCTTCGAAAAACCCTCTTTCCACCAACCCCACTTCCCCTTTTTCCCCATTCTACCCAAACCTCCTCTCAACCGTCCGATCGAAATTCCCCCATCGCCCCCATATCTCCACCTTCGCCTCCATTTATGGCGTCTCTTCAAAACCCACCTCGCAGACTATCAATCCAATCCTCAAACCGAGGCAATTCTGCAAAATTCCTGTGAACCCATTTGGGTTTCTTCCTTCAAAGCCTAACTCCCATGTCCCCGCCGCCGCTGCCGCAGATGGCGGCGATACCACCGCTGATTCCGCCCCCAGCAGCAAAAAATTTCAGCTAGCCATCGTCTTTGGGCTCTGGTATTTTCAGAACATCGTCTTCAATATCTATAACAAGAAGGTTCTCAACATTTTTCCTTTCCCATGGCTTCTCGCTTCGTTTCAACTCTTCGCTGGATCTGTTTGGATGCTTGTTCTCTGGTCCTTTAAGCTTCAGCCGTGTCCTAAAATCTCCAAGCCCTTTCTCATCGCTCTCCTCGGCCCTGCTTTATTTCACACAATCGGCCATATCTCCGCTTGTGTTTCGTTCTCTAAAGTCGCTGTTTCTTTCACTCATGTCATTAAGTCGGCTGAACCAGTGTTTTCGGTTCTGTTCTCCTCGTTCCTTGGCGATTCGTACCCAATCCAGGTCTGGCTCTCGATTCTCCCCATTGTTTTTGGTTGCTCTCTAGCCGCCATTACTGAAGCTACCTTCAATTTCGAAGGTCTCTCAGGCGCTATGATCAGTAATGTAGGGTTTGTATTAAGAAACATTTACTCTAAAAGGAGCTTGCAGAACTTCAAAGAGGTTAATGGGTTGAATTTATATGGTTGGATTAGTATAATTTCTTTGTTGTATCTGTTTCCTGTGGCCATTTTCGTTGAAGGGTCAAAGTGGGTTCAAGGATATCATCAAGCAATTGCTTCCATTGGAAATGCTTCTACATTATATATCTGGGTTTTGATTTCTGGAATCTTTTATCATCTTTATAATCAATCTTCTTACCAAGCTTTAGATGAAATCAGTCCTTTGACATTCTCTGTTGGTAATACAATGAAGAGAGTGGTTGTGATTGTGGCTTCTGTGTTGGTTTTTAGAAATCCAGTTAGGCCTTTGAATGCTGTTGGTTCTGCCATTGCCATTTTTGGGACTTTTCTGTATTCTCAGGCAACAAGTAAAAAGAGTTCTAAGAAGATTGAGGATGGTGAAGAAAAGAAGGATTGA 1260 43.73 MLSSHLIPSKNPLSTNPTSPFSPFYPNLLSTVRSKFPHRPHISTFASIYGVSSKPTSQTINPILKPRQFCKIPVNPFGFLPSKPNSHVPAAAAADGGDTTADSAPSSKKFQLAIVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFAGSVWMLVLWSFKLQPCPKISKPFLIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPIQVWLSILPIVFGCSLAAITEATFNFEGLSGAMISNVGFVLRNIYSKRSLQNFKEVNGLNLYGWISIISLLYLFPVAIFVEGSKWVQGYHQAIASIGNASTLYIWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVASVLVFRNPVRPLNAVGSAIAIFGTFLYSQATSKKSSKKIEDGEEKKD* 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1792692 1793951 - Chy6G107950.1 Chy06g00267 227976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00267 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 402 - -
Chy06g00267 419 PANTHER SOLUTE CARRIER FAMILY 35 71 413 - -
Chy06g00267 419 Pfam Triose-phosphate Transporter family 111 400 IPR004853 -
Chy06g00267 419 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 71 413 - -
Chy06g00267 419 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 111 410 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01687 Chy-Chr2:16869224 Chy06g00267 Chy-Chr6:1792692 3.26E-104 dispersed
Chy06g00267 Chy-Chr6:1792692 Chy12g01264 Chy-Chr12:17224495 5.31E-74 dispersed
Chy06g00267 Chy-Chr6:1792692 Chy02g00387 Chy-Chr2:2470861 2.26E-99 transposed
Chy06g00267 Chy-Chr6:1792692 Chy06g01802 Chy-Chr6:21686807 4.82E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00267 K15283 - csv:101219051 778.089