Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g00280 | ATGGCGGGTTTAGACTTGGGCTCTGCTTCTCACTTTGTTCATCAACTTCAGCATCGTTCCGTGGATCTCCACCTCCAACATCAGACCGATGTAGACGACGGTTCCGACCACCAACCTAACTCCGGCGGAGAGATCGTTGCCCGCCGGTCCAGAGGTAGACCGCCCGGTTCCAGGAATAAACCCAAACCACCGGTTATTATTACCAGAGAAAGCGCTAACACTCTTCGGGCCCACATCTTGGAAGTCAACACCGGTTGTGATGTCTTTGACTCCGTCGCCACTTATGCCCGGAAACGCCAGCGTGGCGTCTGCATCTTGAGCGGCACCGGCGCCGTTACTAACGTTACCTTACGGCAACCTTCATCAACCGGCGGCGCTATTACTCTTCCTGGAAGGTTTGAGATATTATCTTTAACGGGATCGTTTTTACCGCCACCGGCACCTCCGGGAGCTACGAGTTTGACTATCTTCCTTGCGGGTGGGCAAGGGCAAATCGTCGGAGGAAATGTTGTCGGGTCTTTGATTGCTTCGGGACCGGTGATCGTCATTGCGTCGTCTTTTACCAATGTTGCTTACGAGAGGTTACCATTGGACGAGGAGGAACAACCGTCCAACGGTGGTGGTGGTGGGAGTCTTAGCAACCCGTTTCCGGACCCGTCGGTCGGGTTGCCGTTGTTTAATATGCCTTCGTCGAACATGGCGGGGAATCAAAATCAGCTGCCGGTGGACGGATGGGGAGGAGGGAATTCCGGTGGGAGAGCATCTTATTGA | 771 | 54.35 | MAGLDLGSASHFVHQLQHRSVDLHLQHQTDVDDGSDHQPNSGGEIVARRSRGRPPGSRNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGVCILSGTGAVTNVTLRQPSSTGGAITLPGRFEILSLTGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEQPSNGGGGGSLSNPFPDPSVGLPLFNMPSSNMAGNQNQLPVDGWGGGNSGGRASY* | 257 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1884621 | 1885650 | + | Chy6G108080.1 | Chy06g00280 | 227989 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g00280 | 256 | ProSiteProfiles | PPC domain profile profile. | 72 | 208 | IPR005175 | - | |
Chy06g00280 | 256 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 72 | 201 | - | - | |
Chy06g00280 | 256 | MobiDBLite | consensus disorder prediction | 29 | 64 | - | - | |
Chy06g00280 | 256 | Gene3D | - | 75 | 203 | - | - | |
Chy06g00280 | 256 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 22 | 256 | IPR014476 | GO:0003680 | |
Chy06g00280 | 256 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 76 | 189 | IPR005175 | - | |
Chy06g00280 | 256 | MobiDBLite | consensus disorder prediction | 225 | 244 | - | - | |
Chy06g00280 | 256 | CDD | DUF296 | 76 | 185 | IPR005175 | - | |
Chy06g00280 | 256 | MobiDBLite | consensus disorder prediction | 199 | 256 | - | - | |
Chy06g00280 | 256 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN | 22 | 256 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01527 | Chy-Chr2:13174959 | Chy06g00280 | Chy-Chr6:1884621 | 1.15E-42 | dispersed | |
Chy03g01303 | Chy-Chr3:16017193 | Chy06g00280 | Chy-Chr6:1884621 | 1.60E-51 | dispersed | |
Chy05g00341 | Chy-Chr5:3529987 | Chy06g00280 | Chy-Chr6:1884621 | 1.58E-67 | dispersed | |
Chy06g00234 | Chy-Chr6:1550149 | Chy06g00280 | Chy-Chr6:1884621 | 8.20E-73 | dispersed | |
Chy06g00280 | Chy-Chr6:1884621 | Chy09g01146 | Chy-Chr9:13721525 | 5.94E-66 | dispersed | |
Chy01g00563 | Chy-Chr1:4028642 | Chy06g00280 | Chy-Chr6:1884621 | 9.33E-59 | transposed | |
Chy02g02320 | Chy-Chr2:27206468 | Chy06g00280 | Chy-Chr6:1884621 | 5.02E-74 | transposed | |
Chy03g00140 | Chy-Chr3:1282191 | Chy06g00280 | Chy-Chr6:1884621 | 5.71E-64 | transposed | |
Chy11g01953 | Chy-Chr11:25567509 | Chy06g00280 | Chy-Chr6:1884621 | 7.03E-109 | wgd | |
Chy04g00082 | Chy-Chr4:850886 | Chy06g00280 | Chy-Chr6:1884621 | 8.38E-105 | wgd | |
Chy06g00280 | Chy-Chr6:1884621 | Chy06g02135 | Chy-Chr6:25683354 | 7.18E-76 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g00280 | - | - | csv:101220959 | 447.203 |