Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g00300 | ATGCCTCCAAGGAAGAAGCCTCATTCTTCTTCCAAGAAACTCAATTCAAATAAACAATCACAGCCTTCCATGTTCGGAATCCAACACTTCTTCGAACGACACTCTCAAAATGTTTCGCATTCTCAGAAGATTTCTTCACAAACTTCCGATTCGAAGACTGATGTTTCCAACTCAATGAATCGTGGAGATGATCGGAATATGGGACGGTTAGATTCTAAGGACGCGGCTGGGGCTGCGGCGGCGACAGCTCAGAAGTCAGAGTCGAGGGTGCTTCTTGTGAGTGATGCGGTTTTAGCTTCTGAAAACCCTAAGGTACTGCAGAGGAATGATGCTAGTTGTTCGCCTCTGAATACGACGCCTGAGAATTTGATTGCAGCTTGTGGAAATCATGGCGATGACTCTTCTAACGAGCTCTCTCCAGAATTTTCCAAGTCCGTTTCCCTGAAGCGCTTCAAGTTCTCTCCCGGGATGCTGATTAAGCAAAGTCAGGACGAGGGGACTAGAACTGATGAGATTACATGGAAGATATCTCCAGTAAACGAAAGGCTTCAGGCTGTTTCGAAGCAATTGCCGGAGACTATAAGAGTTTTGGCGAACTCATCAAGGCTAAGCTCTTTGAGAATTAGACAGTGTTCACGAAACAAGACTTCCTCTGTCGAGTCTGGGAACTTTGAGCAGTTGAGTTCACCAAACCCGAAACCTTCTGAAAGATCAATAGCTTCGTTAAATAAGACTGGATTGAAAAGGGTAAATCCTAAGCATGACGTGGAACCCAATGGAGTTGTGAATGATAGTTTGAGTAGCTCTAGAGTAGCTAATAGTCCGAGTCGATTCCAGACGCCCCCATCTTTGTCATACTGCGACAAGGGTTCCAATGATGTTGCTGCATGTAATGAAGCACCTGATCATCCTATTTTAAGACCACACAAAAAGGCATTACTTGAGCTTTTGGATCAAGTAGAAGATGTCATTGCCGTTGATACAGTGGCTTCTTCTATTGACTTGGGGGACGATTCATCTGAATTAAAAGGTAGAAATGGTAACACATTGACTGCCAGAGTTGATTCAGACACTGTAATGAAGGCATGCCCTTGTGATTTTCTTGTCTTGGAGGTAACAGAGAAATGTGAGCTGGCTGATACATATGGAGTAAAACGCTCGTATAAGGTTCTTCGTTTGTTAAATGAACAAAGTGGAGAAGAACGGGCTGTATATCTTTGGGAAGACTGGTTTGACAGTATTATTGCTCCTGGAGACACCGTGAATGTTATTGGTGAATTTGATGACCAAGGAAGATGTCATGTTGACCGCGACAATAATTTCGTTATCCTACACCCCGATATACTAGTGTCAGGAACTCGGGTTGCTGGTCATTTGACCTGTCCAAGGAGGAGTATTCTTGATGAGAGGCTGAAAAGTAACGAACAGTCTGTTGCAGCATTAATTGGTACTTTGCTGCACCAGGTTTTTCAGGCTGGTCTTATAGAAGAGGCACCGACTGTAGCCTTTTTGGAAGAGGTTTCAAGAACGGTGCTTCAGAAAAGTATAGAAAATGTGTATGCATGCGGAGCAAATGAAAAGGATATACGCATAACCATGAATGAAGCAGTTCCAAAAATTTTACATTGGATCGGCATGTTCAAAGGCCCAATGGGTTCTAAAGCACCTTCTATTGAGTTTAGATCTGAGGATGATCCCAGGAAAGTTAGTATATCAGAGGTGATTGATATTGAGGAGATGGCTTGGGCTCCCAAATATGGTTTGAAAGGAATAATTGATGCTTCCGTCAGGGTAAATGTAATGTCAGATTATAATAAATGTGCCGTGAATGTCATGCCTTTAGAGTTTAAAACTGGAAAGGTGCCAGCTGGCCAGTCCTCCATGGAACATTGCGCCCAAGTGATCTTGTACACACTACTTATGTCTGAGAGGTATCAAAAACATGTTGGTTATGGTCTCCTGTACTATCTTCGGTCAAATCAGACACAGGGTATCCGGGTTCAAAGATCTGACTTGGTAGGGTTAATCATGCGTCGCAATGAGCTTGCAAATAACATCCTCAAGGCATCAACTGCACAATCACTCCCCCCTATGTTACAGATTCCAAATGTGTGCAAAGGATGCCGCCATCTTGATGTTTGCACCATTTATCATAAGATGCAAAATGGAAGCAAAGAGACCAGTGGGCTTGGAGTCTTATTTGAATCCCATACAGATCACTTGCAAGCTTCTCATGGTATTTTCTTTCAGCATTGGGAAAGATTGATTGATTTAGAGGCAAAGGAGATGGAGCTTGTAAAGAGGGGAGTTTGGCACTCACGTAGTACAGATAAAAATCAAACGTCTATCTGTCTTTCTTCTATTGTTCTTAGTACGTTGGATGACCAACCACATTGTACTTTTGAGAAGGACAACCGAATCAGCTATCGTTTTGTGCATCAAGATTCAAATAATGATAGTTCAAACACTGCTTCAATAAATGACATGGACAGTTCACTTAGAGTTGGTGACTATGTGATACTCAGTACAGATTCTGGGCATTTGACCCTAGCGAGTGGGATTATAACAGATCTGAGCAGTCTCCATGTATCCGTTTCTTTTTCTAAGCGTCTACGTCTTCCTGGAAGCACTTCTTCTACAGAAGCACGTGATCTTATGAAGCAGGTTTGGCGGATTGACAAGGATGAATTTATGACTTCATTTGCAGTCATGAGGTTTAATCTCGTACAACTGTTTCTGCAAGGTGAGCAAAATGCTCATCTTAGGAAGTTGATAGTAGATCTTGCGGCTCCAAGATTTGATGGTGGATGCATATTCAGCCAGGATCCAGCAATATCTTACATTTGGTCAGAGAAGAATTTAAATGATGACCAACGGCGAGCTATAATTAAGATACTTACAGCAAAGGATTATGCCCTGATTCTAGGAATGCCTGGAACAGGCAAGACATCCACAATGGTTCATGCTGTGAAGGCATTGTTGATGAGAGGTGTATCTATTTTGCTCACGTCCTACACAAACACTGCTGTTGATAATTTACTTATCAAACTGAAATCTCAGAACATTGATTTTATACGGATTGGAAGAATTAATGCAGTGCATGAAGACATTCGCAGCCATTGCTTCTCGGAGTTGAACATACAAAGTGTGGAAGACATCAAAATGAGATTGGACCAAGTGCAAGTTGTTGCAGTTACCTGTTTGGGGATAACTAGTCCCTTACTCGTCAATAAAAAATTTGATATATGCATAATGGATGAAGCTGGACAGACCACTCTTCCGGTTTCCCTTGGGCCTTTGATGTTTGCTTCTACATTTGTCCTTGTTGGCGATCACTATCAGTTGCCTCCTCTTGTTCAGAGTACAGAGGCTCGGGAAAATGGACTGGGGATAAGCTTATTTTGTAGGCTTTCAGAAGCACATCCTCAAGCAGTTTCTGCTTTACAAAGCCAGTATCGCATGTGCCGAGACATTATGGAGTTATCAAATGCCTTGATATATGGAGACAGATTGCGTTGTGGTTCTGAAGAAACAGCGAATGCAAAGCTTGAATTTTCAAGTTCAAAGTTTTCTTCATCTTGGCTTAAGGAGGTTCTAAACCCATGCAAACCAGTTATCTTTGTTTGTACAGATTTGTTACCTGCTTACGAGACAAGAGATCACAAGATTGTGAACAATCCAATTGAAGCTAACATATTAGCGGAGGTGACGAAAGGATTGCTTGATGGTGGAATTAAGGGGAATGAAGTTGGGATTATTACTCCGTATAACTCCCAGGCAAGCATCATTCGTCTAGCTATCAACATTGCCTCTGTGGAGGTACATACCATTGACAAATACCAGGGAAGAGACAAGGACTGCATATTGGTGTCCTTCGTTAGGTCGAGCGAAAATCCAAAGAGCTGTACTACCTCACTCCTTGGAGACTGGCATCGAATTAACGTAGCCATTACACGTGCCAAGAAAAAGCTAATCATGGTGGGATCACGCAAAACCCTATCAAAAGTTCCATTGCTGAAGCTTCTAATCAAGAAGGTGGAGGAGCAATCAGGCATATTAAATGTAACAAGGAATGATATACTACATCAAAGCAACAATCTCCCTAGTTGCACATAG | 4116 | 42.23 | MPPRKKPHSSSKKLNSNKQSQPSMFGIQHFFERHSQNVSHSQKISSQTSDSKTDVSNSMNRGDDRNMGRLDSKDAAGAAAATAQKSESRVLLVSDAVLASENPKVLQRNDASCSPLNTTPENLIAACGNHGDDSSNELSPEFSKSVSLKRFKFSPGMLIKQSQDEGTRTDEITWKISPVNERLQAVSKQLPETIRVLANSSRLSSLRIRQCSRNKTSSVESGNFEQLSSPNPKPSERSIASLNKTGLKRVNPKHDVEPNGVVNDSLSSSRVANSPSRFQTPPSLSYCDKGSNDVAACNEAPDHPILRPHKKALLELLDQVEDVIAVDTVASSIDLGDDSSELKGRNGNTLTARVDSDTVMKACPCDFLVLEVTEKCELADTYGVKRSYKVLRLLNEQSGEERAVYLWEDWFDSIIAPGDTVNVIGEFDDQGRCHVDRDNNFVILHPDILVSGTRVAGHLTCPRRSILDERLKSNEQSVAALIGTLLHQVFQAGLIEEAPTVAFLEEVSRTVLQKSIENVYACGANEKDIRITMNEAVPKILHWIGMFKGPMGSKAPSIEFRSEDDPRKVSISEVIDIEEMAWAPKYGLKGIIDASVRVNVMSDYNKCAVNVMPLEFKTGKVPAGQSSMEHCAQVILYTLLMSERYQKHVGYGLLYYLRSNQTQGIRVQRSDLVGLIMRRNELANNILKASTAQSLPPMLQIPNVCKGCRHLDVCTIYHKMQNGSKETSGLGVLFESHTDHLQASHGIFFQHWERLIDLEAKEMELVKRGVWHSRSTDKNQTSICLSSIVLSTLDDQPHCTFEKDNRISYRFVHQDSNNDSSNTASINDMDSSLRVGDYVILSTDSGHLTLASGIITDLSSLHVSVSFSKRLRLPGSTSSTEARDLMKQVWRIDKDEFMTSFAVMRFNLVQLFLQGEQNAHLRKLIVDLAAPRFDGGCIFSQDPAISYIWSEKNLNDDQRRAIIKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGVSILLTSYTNTAVDNLLIKLKSQNIDFIRIGRINAVHEDIRSHCFSELNIQSVEDIKMRLDQVQVVAVTCLGITSPLLVNKKFDICIMDEAGQTTLPVSLGPLMFASTFVLVGDHYQLPPLVQSTEARENGLGISLFCRLSEAHPQAVSALQSQYRMCRDIMELSNALIYGDRLRCGSEETANAKLEFSSSKFSSSWLKEVLNPCKPVIFVCTDLLPAYETRDHKIVNNPIEANILAEVTKGLLDGGIKGNEVGIITPYNSQASIIRLAINIASVEVHTIDKYQGRDKDCILVSFVRSSENPKSCTTSLLGDWHRINVAITRAKKKLIMVGSRKTLSKVPLLKLLIKKVEEQSGILNVTRNDILHQSNNLPSCT* | 1372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2006618 | 2019794 | - | Chy6G108280.1 | Chy06g00300 | 228009 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g00300 | 1371 | Pfam | DNA replication factor Dna2 | 396 | 598 | IPR014808 | - | |
Chy06g00300 | 1371 | MobiDBLite | consensus disorder prediction | 214 | 245 | - | - | |
Chy06g00300 | 1371 | CDD | SF1_C_Upf1 | 1154 | 1347 | IPR041679 | - | |
Chy06g00300 | 1371 | MobiDBLite | consensus disorder prediction | 261 | 284 | - | - | |
Chy06g00300 | 1371 | MobiDBLite | consensus disorder prediction | 214 | 284 | - | - | |
Chy06g00300 | 1371 | CDD | DEXXQc_DNA2 | 953 | 1153 | - | - | |
Chy06g00300 | 1371 | PANTHER | DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE | 2 | 1364 | - | - | |
Chy06g00300 | 1371 | MobiDBLite | consensus disorder prediction | 13 | 63 | - | - | |
Chy06g00300 | 1371 | Gene3D | - | 451 | 715 | IPR011604 | - | |
Chy06g00300 | 1371 | PANTHER | DNA2/NAM7 HELICASE FAMILY | 2 | 1364 | IPR045055 | - | |
Chy06g00300 | 1371 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
Chy06g00300 | 1371 | Pfam | AAA domain | 1054 | 1121 | IPR041677 | GO:0004386 | |
Chy06g00300 | 1371 | Pfam | AAA domain | 953 | 1045 | IPR041677 | GO:0004386 | |
Chy06g00300 | 1371 | Pfam | AAA domain | 1131 | 1330 | IPR041679 | - | |
Chy06g00300 | 1371 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 952 | 1340 | IPR027417 | - | |
Chy06g00300 | 1371 | Gene3D | - | 1152 | 1366 | IPR027417 | - | |
Chy06g00300 | 1371 | Gene3D | - | 889 | 1151 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00300 | Chy-Chr6:2006618 | Chy09g00939 | Chy-Chr9:12151728 | 7.51E-40 | dispersed | |
Chy06g00300 | Chy-Chr6:2006618 | Chy06g02112 | Chy-Chr6:25330110 | 5.21E-35 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g00300 | K10742 | - | csv:101220726 | 2595.46 |